Table 2. Common variant genes of interest.

Locus	Lead marker	Chr	GRCh37 pos. (Mb)	Associated trait(s)a	Major/minor allele	MAF	Beta sign	p-value	HWE p-value
ANGPTL3	rs67461605	1	63.07	TG	GTTAATGTG/-	0.34	–	2 × 10−13	0.1641
CELSR2	rs7528419	1	109.82	LDL, TC	A/G	0.23	–	6 × 10−17	0.3715
GCKR	rs1260326	2	27.73	TG	C/T	0.34	+	1 × 10−9	3.70E–05
MLXIPL	rs13240065	7	73.02	TG	G/A	0.11	–	2 × 10−12	0.1131
LPL	rs15285	8	19.82	HDL	C/T	0.32	+	5 × 10−24	0.000496
	rs75278536		19.82	TG	T/G	0.09	–	1 × 10−17	0.1483
TRIB1	rs28601761	8	126.5	TC	C/G	0.38	–	2 × 10−9	0.2015
	rs6982502		125.48	TG	T/C	0.41	–	1 × 10−8	3.74E–09
ZNF259	rs964184	11	116.65	TG	C/G	0.16	+	3 × 10−24	0.1834
LIPC	rs1532085	15	58.68	HDL	G/A	0.4	+	6 × 10−10	0.003875
CETP	rs247617	16	56.99	HDL	C/A	0.3	+	2 × 10−43	1
LIPG	rs4939884	18	47.17	HDL	C/T	0.14	–	2 × 10−9	0.2113
APOE	rs7412	19	45.41	LDL, TC	C/T	0.08	–	8 × 10−44	0.677
	rs75627662		45.41	TG	C/T	0.18	+	4 × 10−13	0.1244
	rs429358		45.41	HDL	T/C	0.14	–	9 × 10−10	6.34E–06

Notes.

Chr

chromosome

MAF

minor allele frequency

TC

total cholesterol

TG

triglycerides

^aPrimary trait listed first.