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Acta Crystallographica Section E: Crystallographic Communications logoLink to Acta Crystallographica Section E: Crystallographic Communications
. 2017 May 12;73(Pt 6):835–837. doi: 10.1107/S205698901700665X

Crystal structure of a heterometallic coordination polymer: poly[di­aqua­bis­(μ7-benzene-1,3,5-tri­carboxyl­ato)dicalcium(II)copper(II)]

Feng Zhang a,*, Bing-Guang Zhang a
PMCID: PMC5458304  PMID: 28638639

The CaO6 polyhedron and CuO4 quadrilateral are connected by the benzene-1,3,5-tri­carboxyl­ate anions to give a three-dimensional polymeric complex.

Keywords: crystal structure, heterometallic complex, copper carboxyl­ates, calcium carboxyl­ates, π–π stacking

Abstract

In the title complex, [Ca2Cu(C9H3O6)2(H2O)2]n, the CaII and CuII cations are bridged by the benzene-1,3,5-tri­carboxyl­ate anions (BTC3−) to form the coordination polymer, in which each BTC3− anion bridges two CuII and five CaII cations with a μ7 coordination mode. The CuII cation, located at an inversion centre, is in a nearly square-planar geometry defined by four O atoms from four bridging BTC3− anions, while the CaII cation is in a distorted octa­hedral geometry defined by five O atoms from bridging BTC3− anions and one water mol­ecule. O—H⋯O hydrogen bonds between coordinating water mol­ecules and carboxyl groups further stabilize the structure; π–π stacking is also observed between parallel benzene rings, the centroid-to-centroid distance being 3.357 (2) Å.

Chemical context  

In recent years, the rational design and synthesis of heterometallic coordination compounds have attracted much attention due to their potential applications in magnetism, luminescence, adsorption, chemical sensing and catalysis, as well as their aesthetically beautiful architectures and topologies (Cui et al., 2012; Huang et al., 2013; Ma et al., 2014; Wimberg et al., 2012). However, hererometallic organic frame­works are investigated less frequently than single-metal organic frameworks in crystal engineering, mainly because of the competitive complexation of different metal ions in the self-assembly progress. Recently, alkaline-earth metal ions have attracted more and more research inter­est owing to their unpredictable coordination number and pH-dependent self-assembly in the construction of novel topological coordination compounds (Borah et al., 2011; Chen et al., 2011). However, the larger atomic radii and high enthalpy of hydration make it relatively difficult to design the coordination polymers of alkaline-earth metal ions as well as to synthesize them from aqueous solution (Reger et al., 2013). As alkaline-earth metals and transition metals coordinate to the same ligand, it often gives rise to homometallic coordination compounds rather than heterometallic ones. In this regard, one of the effective synthetic strategies in building the alkaline-earth-metal-containing compounds is to employ appropriate bridging ligands. As a multifunctional hybrid ligand, H3BTC (benzene-1,3,5-tricarboxylic acid) in its partly or fully deprotonated form exhibits versatile coordination modes and can bind to the metal ions by making full use of the carboxyl­ate oxygen atoms. In addition, heterometallic compounds incorporating only the H3BTC ligand are few in number (Chen et al., 2004; Li et al., 2010; Sun et al., 2014, 2016; Xu et al., 2014). As part of our ongoing studies on these compounds, we describe here synthesis and crystal structure of the title compound, [Ca2Cu(BTC)2(H2O)2]n, (1).graphic file with name e-73-00835-scheme1.jpg

Structural commentary  

The asymmetric unit of (1) contains one copper(II) cation (located at an inversion centre), one calcium(II) cation, one BTC3− anion and one coordinating water mol­ecule (Fig. 1). The Cu—O bond lengths are in the range 1.9435 (19)–1.9800 (19) Å and the Ca—O bond lengths are in the range of 2.280 (2)–2.466 (2) Å (Table 1). All data are comparable to those reported for other related CuII–BTC and CaII–BTC complexes (Chui et al., 1999; Yang et al., 2004) . Each CuII cation is four-coordinated by four oxygen atoms from four different BTC3− anions, forming a nearly square-planar geometry. Each CaII cation is six-coordinated by five carboxyl­ate oxygen atoms from five different BTC3− anions and one terminal water mol­ecule, displaying a distorted octa­hedron (Fig. 1). The mean deviation of the equatorial plane constructed by atoms O1, O4, O6 and OW1 is 0.06 Å. The H3BTC molecule is fully deprotonated and bridges two CuII ions and five CaII ions in a μ7 coordination mode.

Figure 1.

Figure 1

The coordination mode and atom-numbering scheme for (1). Displacement ellipsoids for non H-atoms are drawn at the 50% probability level, with H atoms shown as spheres of arbitrary radius. [Symmetry codes: (A) x, y, z + 1; (B) −x, −y + 1, −z + 2; (C) x, y − 1, z; (D) −x, −y + 1, −z + 1; (E) −x + 1, −y + 2, −z + 2; (F) x, y + 1, z; (G) −x + 1, −y + 1, −z + 2; (H) x, y, z − 1.]

Table 1. Selected bond lengths (Å).

Ca1—O1 2.338 (2) Ca1—O6iv 2.357 (2)
Ca1—O3i 2.280 (2) Ca1—OW1 2.390 (2)
Ca1—O4ii 2.333 (2) Cu1—O2 1.9435 (19)
Ca1—O5iii 2.466 (2) Cu1—O5v 1.9800 (19)

Symmetry codes: (i) Inline graphic; (ii) Inline graphic; (iii) Inline graphic; (iv) Inline graphic; (v) Inline graphic.

Supra­molecular features  

Each CuO4 quadrilateral shares a vertex (O5) with two CaO6 polyhedra to form a trinuclear unit {CuCa2O14} with Ca–O–Cu–O–Ca connectivity (Fig. 2). Such units are cross-linked by the μ7-BTC3− anions to create a three-dimensional framework (Fig. 3). In addition, the terminal water mol­ecule is hydrogen bonded to the carboxyl­ate O atoms (Table 2), forming a two-dimensional network parallel to (100). π-π stacking inter­actions between (C1–C6) benzene rings [CgCg(−x, 1 − y, 2 − z) = 3.357 (2) Å] further stabilize the crystal structure.

Figure 2.

Figure 2

The trinuclear unit constructed from a [CaO6] octa­hedron and a [CuO4] quadrilateral.

Figure 3.

Figure 3

Polyhedral view of the three-dimensional heterometallic coordination framework of (1). All H atoms have been omitted for clarity.

Table 2. Hydrogen-bond geometry (Å, °).

D—H⋯A D—H H⋯A DA D—H⋯A
OW1—HW1A⋯O4v 0.84 (1) 1.95 (1) 2.793 (3) 173 (3)
OW1—HW1B⋯O2vi 0.84 (1) 2.31 (2) 3.020 (3) 143 (3)

Symmetry codes: (v) Inline graphic; (vi) Inline graphic.

Synthesis and crystallization  

The title compound was synthesized using a similar procedure to that for the synthesis of the analogous compound [CuSr2(BTC)2]·10H2O (Sun et al., 2016). A mixture of H3BTC (210 mg, 1 mmol), CuCl2·6H2O (121 mg, 0.5 mmol) and CaCl2 (110 mg, 1 mmol) in 15 mL of distilled water was stirred for 10 min in air; 0.5 M NaOH was then added dropwise, and then the mixture was turned into a Parr Teflon-lined stainless steel vessel and heated to 443 K for 3 d. Blue block-shaped crystals suitable for X-ray diffraction were obtained in 60% yield (based on benzene-1,3,5-tri­carb­oxy­lic acid).

Refinement  

Crystal data, data collection and structure refinement details are summarized in Table 3. The hydrogen atoms of the coordinating water mol­ecule were located from a difference-Fourier map, but refined using a riding model with isotropic displacement parameters U iso(H) = 1.2U eq(O). Hydrogen atoms attached to carbon atoms were positioned geometrically (C—H = 0.93 Å) and refined with U iso(H) = 1.2U eq(C).

Table 3. Experimental details.

Crystal data
Chemical formula [Ca2Cu(C9H3O6)2(H2O)2]
M r 593.96
Crystal system, space group Triclinic, P Inline graphic
Temperature (K) 296
a, b, c (Å) 6.664 (3), 8.754 (4), 8.925 (4)
α, β, γ (°) 103.065 (4), 110.140 (4), 92.776 (5)
V3) 471.6 (4)
Z 1
Radiation type Mo Kα
μ (mm−1) 1.79
Crystal size (mm) 0.18 × 0.15 × 0.14
 
Data collection
Diffractometer Bruker SMART CCD
Absorption correction Multi-scan (SADABS; Bruker, 2009)
T min, T max 0.721, 0.766
No. of measured, independent and observed [I > 2σ(I)] reflections 2442, 1635, 1588
R int 0.012
(sin θ/λ)max−1) 0.595
 
Refinement
R[F 2 > 2σ(F 2)], wR(F 2), S 0.029, 0.084, 1.04
No. of reflections 1635
No. of parameters 166
No. of restraints 3
H-atom treatment H atoms treated by a mixture of independent and constrained refinement
Δρmax, Δρmin (e Å−3) 0.35, −0.68

Computer programs: APEX2 and SAINT (Bruker, 2009), SHELXS97 and SHELXTL (Sheldrick, 2008), SHELXL2014 (Sheldrick, 2015) and DIAMOND (Brandenburg, 2006).

Supplementary Material

Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S205698901700665X/xu5901sup1.cif

e-73-00835-sup1.cif (21KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S205698901700665X/xu5901Isup2.hkl

e-73-00835-Isup2.hkl (80.5KB, hkl)

CCDC reference: 1547715

Additional supporting information: crystallographic information; 3D view; checkCIF report

supplementary crystallographic information

Crystal data

[Ca2Cu(C9H3O6)2(H2O)2] Z = 1
Mr = 593.96 F(000) = 299
Triclinic, P1 Dx = 2.091 Mg m3
Hall symbol: -P 1 Mo Kα radiation, λ = 0.71073 Å
a = 6.664 (3) Å Cell parameters from 1990 reflections
b = 8.754 (4) Å θ = 2.4–27.5°
c = 8.925 (4) Å µ = 1.79 mm1
α = 103.065 (4)° T = 296 K
β = 110.140 (4)° Block, blue
γ = 92.776 (5)° 0.18 × 0.15 × 0.14 mm
V = 471.6 (4) Å3

Data collection

Bruker SMART CCD diffractometer 1635 independent reflections
Radiation source: fine-focus sealed tube 1588 reflections with I > 2σ(I)
Graphite monochromator Rint = 0.012
φ and ω scans θmax = 25.0°, θmin = 2.4°
Absorption correction: multi-scan (SADABS; Bruker, 2009) h = −7→7
Tmin = 0.721, Tmax = 0.766 k = −10→4
2442 measured reflections l = −10→10

Refinement

Refinement on F2 Primary atom site location: structure-invariant direct methods
Least-squares matrix: full Secondary atom site location: difference Fourier map
R[F2 > 2σ(F2)] = 0.029 Hydrogen site location: inferred from neighbouring sites
wR(F2) = 0.084 H atoms treated by a mixture of independent and constrained refinement
S = 1.04 w = 1/[σ2(Fo2) + (0.0501P)2 + 0.6456P] where P = (Fo2 + 2Fc2)/3
1635 reflections (Δ/σ)max < 0.001
166 parameters Δρmax = 0.35 e Å3
3 restraints Δρmin = −0.68 e Å3

Special details

Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > 2sigma(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R- factors based on ALL data will be even larger.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
Ca1 0.13337 (8) 0.79200 (6) 0.58531 (6) 0.01430 (16)
Cu1 0.5000 1.0000 1.0000 0.01590 (16)
O1 0.2949 (3) 0.6981 (2) 0.8180 (2) 0.0206 (4)
O2 0.3877 (3) 0.8375 (2) 1.0782 (2) 0.0192 (4)
O3 0.2155 (4) 0.5598 (2) 1.4590 (2) 0.0273 (5)
O4 0.1993 (3) 0.2977 (2) 1.4102 (2) 0.0190 (4)
O5 0.2085 (3) 0.0033 (2) 0.8405 (2) 0.0186 (4)
O6 0.0233 (4) 0.1170 (2) 0.6527 (2) 0.0283 (5)
C1 0.2707 (4) 0.5610 (3) 1.0114 (3) 0.0126 (5)
C2 0.2808 (4) 0.5623 (3) 1.1690 (3) 0.0145 (5)
H2A 0.3166 0.6577 1.2499 0.017*
C3 0.2377 (4) 0.4211 (3) 1.2074 (3) 0.0136 (5)
C4 0.1929 (4) 0.2786 (3) 1.0883 (3) 0.0142 (5)
H4A 0.1703 0.1841 1.1148 0.017*
C5 0.1815 (4) 0.2765 (3) 0.9288 (3) 0.0142 (5)
C6 0.2163 (4) 0.4182 (3) 0.8895 (3) 0.0136 (5)
H6A 0.2034 0.4176 0.7822 0.016*
C7 0.3178 (4) 0.7085 (3) 0.9639 (3) 0.0139 (5)
C8 0.2195 (4) 0.4278 (3) 1.3728 (3) 0.0154 (5)
C9 0.1339 (4) 0.1255 (3) 0.7989 (3) 0.0142 (5)
OW1 0.4854 (3) 0.8960 (3) 0.6111 (3) 0.0315 (5)
HW1A 0.587 (4) 0.844 (3) 0.604 (4) 0.038*
HW1B 0.544 (5) 0.9871 (18) 0.669 (4) 0.038*

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
Ca1 0.0188 (3) 0.0142 (3) 0.0099 (3) 0.0011 (2) 0.0048 (2) 0.0040 (2)
Cu1 0.0204 (3) 0.0110 (2) 0.0147 (3) 0.00010 (17) 0.00383 (19) 0.00479 (18)
O1 0.0344 (11) 0.0158 (9) 0.0143 (9) 0.0058 (8) 0.0090 (8) 0.0084 (7)
O2 0.0282 (10) 0.0125 (9) 0.0145 (9) −0.0024 (7) 0.0056 (8) 0.0035 (7)
O3 0.0480 (13) 0.0191 (10) 0.0181 (10) 0.0061 (9) 0.0181 (10) 0.0016 (8)
O4 0.0236 (10) 0.0189 (10) 0.0181 (9) 0.0014 (7) 0.0094 (8) 0.0092 (8)
O5 0.0228 (10) 0.0107 (9) 0.0180 (9) 0.0032 (7) 0.0027 (8) 0.0030 (7)
O6 0.0452 (13) 0.0206 (10) 0.0118 (10) 0.0027 (9) 0.0010 (9) 0.0051 (8)
C1 0.0118 (12) 0.0128 (12) 0.0131 (12) 0.0020 (9) 0.0033 (10) 0.0049 (10)
C2 0.0160 (12) 0.0128 (12) 0.0141 (12) 0.0015 (9) 0.0051 (10) 0.0032 (10)
C3 0.0148 (12) 0.0140 (12) 0.0124 (12) 0.0025 (9) 0.0049 (10) 0.0043 (10)
C4 0.0169 (12) 0.0119 (12) 0.0155 (12) 0.0035 (9) 0.0057 (10) 0.0065 (10)
C5 0.0143 (12) 0.0135 (12) 0.0131 (12) 0.0032 (10) 0.0030 (10) 0.0033 (10)
C6 0.0159 (12) 0.0130 (12) 0.0125 (12) 0.0044 (10) 0.0040 (10) 0.0057 (10)
C7 0.0145 (12) 0.0135 (12) 0.0167 (13) 0.0051 (9) 0.0063 (10) 0.0078 (10)
C8 0.0154 (12) 0.0174 (13) 0.0130 (12) 0.0024 (10) 0.0047 (10) 0.0036 (10)
C9 0.0177 (12) 0.0129 (12) 0.0129 (13) 0.0017 (10) 0.0056 (10) 0.0050 (10)
OW1 0.0262 (11) 0.0264 (11) 0.0459 (14) 0.0047 (9) 0.0166 (10) 0.0116 (10)

Geometric parameters (Å, º)

Ca1—O1 2.338 (2) O5—Ca1viii 2.466 (2)
Ca1—O3i 2.280 (2) O6—C9 1.241 (3)
Ca1—O4ii 2.333 (2) O6—Ca1iv 2.357 (2)
Ca1—O5iii 2.466 (2) O6—Ca1viii 2.954 (2)
Ca1—O6iv 2.357 (2) C1—C2 1.382 (4)
Ca1—OW1 2.390 (2) C1—C6 1.395 (4)
Ca1—Cu1 3.6439 (13) C1—C7 1.499 (3)
Cu1—O2v 1.9435 (19) C2—C3 1.398 (4)
Cu1—O2 1.9435 (19) C2—H2A 0.9300
Cu1—O5vi 1.9800 (19) C3—C4 1.386 (4)
Cu1—O5iii 1.9800 (19) C3—C8 1.511 (3)
Cu1—Ca1v 3.6439 (13) C4—C5 1.395 (4)
O1—C7 1.239 (3) C4—H4A 0.9300
O2—C7 1.278 (3) C5—C6 1.393 (4)
O3—C8 1.242 (3) C5—C9 1.485 (3)
O3—Ca1vii 2.280 (2) C6—H6A 0.9300
O4—C8 1.271 (3) C8—Ca1ii 3.141 (3)
O4—Ca1ii 2.333 (2) C9—Ca1viii 3.104 (3)
O5—C9 1.278 (3) OW1—HW1A 0.844 (10)
O5—Cu1viii 1.9800 (19) OW1—HW1B 0.836 (10)
O3i—Ca1—O4ii 99.86 (8) C7—O2—Cu1 110.48 (16)
O3i—Ca1—O1 81.17 (8) C8—O3—Ca1vii 168.1 (2)
O4ii—Ca1—O1 87.46 (7) C8—O4—Ca1ii 118.28 (16)
O3i—Ca1—O6iv 97.47 (8) C9—O5—Cu1viii 125.84 (16)
O4ii—Ca1—O6iv 93.57 (8) C9—O5—Ca1viii 107.73 (15)
O1—Ca1—O6iv 178.43 (7) Cu1viii—O5—Ca1viii 109.61 (8)
O3i—Ca1—OW1 83.82 (8) C9—O6—Ca1iv 157.26 (18)
O4ii—Ca1—OW1 173.99 (8) C9—O6—Ca1viii 85.06 (15)
O1—Ca1—OW1 88.42 (8) Ca1iv—O6—Ca1viii 114.30 (8)
O6iv—Ca1—OW1 90.64 (8) C2—C1—C6 120.0 (2)
O3i—Ca1—O5iii 148.03 (7) C2—C1—C7 122.6 (2)
O4ii—Ca1—O5iii 91.33 (7) C6—C1—C7 117.4 (2)
O1—Ca1—O5iii 69.43 (7) C1—C2—C3 120.3 (2)
O6iv—Ca1—O5iii 111.71 (7) C1—C2—H2A 119.8
OW1—Ca1—O5iii 83.12 (7) C3—C2—H2A 119.8
O3i—Ca1—Cu1 118.21 (6) C4—C3—C2 119.6 (2)
O4ii—Ca1—Cu1 110.50 (5) C4—C3—C8 120.9 (2)
O1—Ca1—Cu1 49.46 (5) C2—C3—C8 119.2 (2)
O6iv—Ca1—Cu1 131.04 (6) C3—C4—C5 120.3 (2)
OW1—Ca1—Cu1 63.49 (6) C3—C4—H4A 119.9
O5iii—Ca1—Cu1 30.79 (4) C5—C4—H4A 119.9
O6iii—Ca1—Cu1 73.03 (4) C6—C5—C4 119.8 (2)
C9iii—Ca1—Cu1 50.47 (5) C6—C5—C9 118.8 (2)
C8ii—Ca1—Cu1 106.72 (6) C4—C5—C9 121.4 (2)
O2v—Cu1—O2 180.000 (1) C5—C6—C1 119.9 (2)
O2v—Cu1—O5vi 91.13 (8) C5—C6—H6A 120.1
O2—Cu1—O5vi 88.87 (8) C1—C6—H6A 120.1
O2v—Cu1—O5iii 88.87 (8) O1—C7—O2 123.6 (2)
O2—Cu1—O5iii 91.13 (8) O1—C7—C1 118.5 (2)
O5vi—Cu1—O5iii 180.000 (1) O2—C7—C1 117.8 (2)
O2v—Cu1—Ca1v 87.31 (6) O3—C8—O4 124.8 (2)
O2—Cu1—Ca1v 92.69 (6) O3—C8—C3 117.4 (2)
O5vi—Cu1—Ca1v 39.61 (5) O4—C8—C3 117.7 (2)
O5iii—Cu1—Ca1v 140.39 (5) O6—C9—O5 120.3 (2)
O2v—Cu1—Ca1 92.69 (6) O6—C9—C5 121.0 (2)
O2—Cu1—Ca1 87.31 (6) O5—C9—C5 118.7 (2)
O5vi—Cu1—Ca1 140.39 (5) Ca1—OW1—HW1A 127 (2)
O5iii—Cu1—Ca1 39.61 (5) Ca1—OW1—HW1B 122 (2)
Ca1v—Cu1—Ca1 180.0 HW1A—OW1—HW1B 105.9 (16)
C7—O1—Ca1 146.05 (17)

Symmetry codes: (i) x, y, z−1; (ii) −x, −y+1, −z+2; (iii) x, y+1, z; (iv) −x, −y+1, −z+1; (v) −x+1, −y+2, −z+2; (vi) −x+1, −y+1, −z+2; (vii) x, y, z+1; (viii) x, y−1, z.

Hydrogen-bond geometry (Å, º)

D—H···A D—H H···A D···A D—H···A
OW1—HW1A···O4vi 0.84 (1) 1.95 (1) 2.793 (3) 173 (3)
OW1—HW1B···O2v 0.84 (1) 2.31 (2) 3.020 (3) 143 (3)

Symmetry codes: (v) −x+1, −y+2, −z+2; (vi) −x+1, −y+1, −z+2.

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Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S205698901700665X/xu5901sup1.cif

e-73-00835-sup1.cif (21KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S205698901700665X/xu5901Isup2.hkl

e-73-00835-Isup2.hkl (80.5KB, hkl)

CCDC reference: 1547715

Additional supporting information: crystallographic information; 3D view; checkCIF report


Articles from Acta Crystallographica Section E: Crystallographic Communications are provided here courtesy of International Union of Crystallography

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