Table 1 appears incorrectly. Please see the complete, correct Table 1 here.
Table 1. Genetic information of L. rhamnosus strains isolated from blood cultures in HUSLAB, 2005–2011.
Strain name | Isolated from | Length (Mb) | G+C (%) | ORFs | Contigs | Coverage | Accession number | Reference |
---|---|---|---|---|---|---|---|---|
L. rhamnosus GG (ATCC 53103) | healthy intestine | 3.01 | 46.7 | 2926 | 1 | Full coverage | NC_013198 | [29] |
Lrh7 | blood | 2.86 | 46.7 | 2851 | 86 | 17 | JTHS00000000 | [30] |
Lrh8 | blood | 2.86 | 46.7 | 2875 | 86 | 17 | JTHR00000000 | [30] |
Lrh9 | blood | 2.88 | 46.7 | 2864 | 112 | 13 | JTHQ00000000 | [30] |
Lrh11 | blood | 2.89 | 46.6 | 2923 | 112 | 10 | JTIT00000000 | [30] |
Lrh13 | blood | 2.9 | 46.7 | 2891 | 209 | 9 | JTIR00000000 | [30] |
Lrh14 | blood | 2.9 | 46.6 | 2883 | 260 | 9 | JTIQ00000000 | [30] |
Lrh18 | blood | 2.93 | 46.6 | 2918 | 222 | 9 | JTIM00000000 | [30] |
Lrh20 | blood | 2.93 | 46.6 | 2929 | 102 | 16 | JTIJ00000000 | [30] |
Lrh22 | blood | 2.96 | 46.6 | 2988 | 195 | 9 | JTIH00000000 | [30] |
Lrh28 | blood | 3.00 | 46.6 | 2982 | 112 | 19 | JTIB00000000 | [30] |
Lrh30 | blood | 3.01 | 46.6 | 3010 | 96 | 12 | JTHY00000000 | [30] |
Lrh32 | blood | 2.95 | 46.6 | 2980 | 64 | 18 | JTHW00000000 | [30] |
Lrh38 | blood | 2.88 | 46.7 | 2648 | 66 | 27 | LPNU00000000 | In this study |
Lrh39 | blood | 3.00 | 46.7 | 2879 | 62 | 45 | LPNT00000000 | In this study |
Lrh46 | blood | 3.09 | 46.7 | 2868 | 71 | 19 | LPNW00000000 | In this study |
Lrh47 | blood | 3.08 | 46.8 | 2860 | 51 | 14 | LPNV00000000 | In this study |
Reference
- 1.Nissilä E, Douillard FP, Ritari J, Paulin L, Järvinen HM, Rasinkangas P, et al. (2017) Genotypic and phenotypic diversity of Lactobacillus rhamnosus clinical isolates, their comparison with strain GG and their recognition by complement system. PLoS ONE 12(5): e0176739 https://doi.org/10.1371/journal.pone.0176739 [DOI] [PMC free article] [PubMed] [Google Scholar]