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. 2017 Jul 13;5(28):e00518-17. doi: 10.1128/genomeA.00518-17

Draft Genome Sequences of 1,183 Salmonella Strains from the 100K Pathogen Genome Project

Nguyet Kong a, Matthew Davis b, Narine Arabyan a, Bihua C Huang a, Allison M Weis a, Poyin Chen a, Kao Thao a,*, Whitney Ng a,*, Ning Chin a, Soraya Foutouhi a,*, Azarene Foutouhi a, James Kaufman b, Yi Xie a,*, Dylan B Storey a,*, Bart C Weimer a,
PMCID: PMC5511902  PMID: 28705963

ABSTRACT

Salmonella is a common food-associated bacterium that has substantial impact on worldwide human health and the global economy. This is the public release of 1,183 Salmonella draft genome sequences as part of the 100K Pathogen Genome Project. These isolates represent global genomic diversity in the Salmonella genus.

GENOME ANNOUNCEMENT

The Salmonella genus includes two species, Salmonella bongori and Salmonella enterica, that are subdivided into >2,500 serovars (1, 2). This organism is a persistent causative agent of gastroenteritis in humans, is carried by livestock, and is one of the most important food pathogens globally (3). Transmission occurs through the ingestion of contaminated food products, resulting in an estimated 1.4 to 1.6 million cases of salmonellosis in the United States, with an estimated cost of $2.3 billion and with ~1.5 billion cases worldwide yearly (4, 5), which results in ~1,000 deaths (6). Control strategies include increased surveillance, biocontrol, hygiene interventions, animal vaccination, and antibiotics (7), which are often used in combination with limited success to control outbreaks among humans. The common occurrence of Salmonella in the global food chain, combined with rapid genome evolution (8), leads to the emergence of hypervirulent and antibiotic-resistant isolates, suggesting that the genetic diversity of these organisms is circumventing current control strategies (4, 9, 10).

The 100K Pathogen Genome Project (http://www.100kgenomes.org) is a large-scale sequencing project focused on producing genomes from a worldwide consortium that represents pathogenic bacteria from the environment, plants, animals, and humans. The consortium sequenced animal- and human health-associated pathogens for use in a reference database. In this release, we sequenced Salmonella genomes from around the world and multiple isolation sources to better understand the genomic diversity of the genus.

All cultures from the 100K Pathogen Genome Project were collected and banked in the laboratory of Bart C. Weimer (University of California, Davis, Davis, CA). The isolates were checked for purity and stored in cryotubes. Genomic DNA was extracted from cultures grown on 1.5% Luria-Bertani agar (Difco, Franklin Lakes, NJ), lysed (11), purified with a Qiagen QIAamp DNA genomic minikit (catalog no. 51306) (12), and checked for quality (13) before fragmentation (14). Genomic DNA was fragmented using a Diagenode Biorupter or Covaris E220, and 1 µg was used for library construction with the Kapa high-throughput (HTP) library preparation kit with dual-SPRI size selection (catalog no. KK8234; Kapa Biosystems, Boston, MA) using the Agilent Bravo next-generation sequencing (NGS) workstation (Santa Clara, CA) with barcodes from Bioo Scientific NEXTflex-96 or Integrated DNA Technologies, Inc. Weimer384-TS-LT (15, 16). Producing libraries with 250- to 500-bp fragments, library amplification was done for eight cycles using the Kapa HiFi HotStart ReadyMix, followed by 1× SPRI bead cleanup. Library size was confirmed using the Agilent 2100 Bioanalyzer with the high-sensitivity DNA kit and indexed (96 genomes/lane). Indexed libraries were quantified with Kapa library quantification (catalog no. KK4824) prior to pooling, followed by sequencing on the Illumina HiSeq 2000 with PE100 (BGI@UCDavis, Sacramento, CA). Paired-end reads were assembled using SPAdes version 3.9.0 (17). In this release, the 100K Pathogen Genome Project has produced sequences for 1,183 different Salmonella isolates.

Accession number(s).

The sequences are publicly available at the 100K Project BioProject (PRJNA186441) and the NCBI GenBank accession numbers are presented in Table 1.

TABLE 1 .

Summary statistics for samples identified as Salmonella enterica and Salmonella bongori

GenBank accession no. SRA accession no. Isolate name Salmonella species Serotype No. of contigs Total genome length (bp)
MXPT00000000 SRR1840594 BCW_1508 S. enterica Newport 214 5,043,101
MXPS00000000 SRR1060743 BCW_1509 S. enterica Enteritidis 63 4,713,310
MXPR00000000 SRR1060742 BCW_1510 S. enterica Heidelberg 55 4,711,382
MXPQ00000000 SRR1060741 BCW_1511 S. enterica Typhimurium 102 4,969,983
MXPP00000000 SRR1060740 BCW_1512 S. enterica Typhi 56 4,748,023
MXPO00000000 SRR1060739 BCW_1514 S. enterica Hadar 59 4,670,890
MXPN00000000 SRR1814238 BCW_1515 S. enterica Virchow 61 4,634,513
MXPM00000000 SRR1060738 BCW_1516 S. enterica Brandenburg 203 4,619,003
MXPL00000000 SRR1060737 BCW_1517 S. enterica 58:l,z13,z28:z6 69 5,118,244
MXPK00000000 SRR1060736 BCW_1518 S. enterica 47:d:z39 134 4,989,558
MXPJ00000000 SRR1060735 BCW_1519 S. enterica 48:d:z6 96 4,965,789
MXPI00000000 SRR1840565 BCW_1520 S. enterica 50:b:z6 176 4,912,725
MXPH00000000 SRR1060734 BCW_1521 S. enterica 53:lz28:z39 22 4,632,667
MXPG00000000 SRR1814239 BCW_1522 S. enterica 39:lz28:enx 101 4,873,505
MXPF00000000 SRR1060733 BCW_1523 S. enterica 13,22:z29:enx 97 4,990,975
MXPE00000000 SRR1814240 BCW_1524 S. enterica 4,12:b:- 92 4,898,957
MXPD00000000 SRR1814241 BCW_1525 S. enterica 18:z4,z23:- 193 5,391,072
MXPC00000000 SRR1060732 BCW_1526 S. enterica 41:z4,z23:- 61 4,570,391
MXPB00000000 SRR1840566 BCW_1528 S. enterica 48:g,z51:- 56 4,455,491
MXPA00000000 SRR1814243 BCW_1529 S. enterica 21:g,z51:- 70 4,520,303
MXOY00000000 SRR1814245 BCW_1531 S. enterica 62:g,z51:- 92 4,553,378
MXOW00000000 SRR1060730 BCW_1534 S. enterica 60:r:e,n,x,z15 192 5,227,166
MXOV00000000 SRR1814247 BCW_1535 S. enterica 48:i:z 73 4,945,054
MXOU00000000 SRR1060729 BCW_1536 S. enterica 61:k:1,5,(7) 70 4,640,267
MXOT00000000 SRR1060728 BCW_1538 S. enterica 48:z10:e,n,x,z15 92 5,170,550
MXOS00000000 SRR1060727 BCW_1539 S. enterica 38:z10:z53 66 4,759,923
MXOR00000000 SRR1060726 BCW_1540 S. enterica 60:r:z 71 4,625,943
MXOQ00000000 SRR1814248 BCW_1541 S. enterica 50:i:z 73 4,832,269
MXOP00000000 SRR1814249 BCW_1542 S. enterica 50:g,z51:- 104 4,684,595
MXOO00000000 SRR1060725 BCW_1543 S. enterica 48:g,z51:- 42 4,500,926
MXON00000000 SRR1060724 BCW_1545 S. enterica 45:g,z51:- 68 4,627,260
MXOM00000000 SRR1060723 BCW_1546 S. enterica 16:z4,z32:- 65 4,622,496
MXOL00000000 SRR1060722 BCW_1547 S. enterica 11:z4,z23:- 61 4,821,071
MXOK00000000 SRR1814251 BCW_1548 S. enterica 6,7:z36:- 98 4,637,903
MXOJ00000000 SRR1814253 BCW_1550 S. enterica 40:g,z51:- 51 4,828,460
MXOH00000000 SRR1060721 BCW_1552 S. enterica 48:i:- 42 4,434,479
MXOG00000000 SRR1840568 BCW_1553 S. bongori 40:z35:- 68 4,619,021
MXOF00000000 SRR1060720 BCW_1554 S. bongori 44:z39:- 36 4,315,393
MXOE00000000 SRR1814255 BCW_1555 S. bongori 60:z41:- 58 4,425,408
MXOD00000000 SRR1814256 BCW_1556 S. bongori 66:z41:- 95 4,417,884
MXOC00000000 SRR1840569 BCW_1557 S. bongori 48:z35:- 36 4,444,858
MXOB00000000 SRR1060719 BCW_1558 S. enterica 6,14,25:z10:1,(2),7 49 4,676,575
MXOA00000000 SRR1840570 BCW_1559 S. enterica 11:b:1,7 80 4,583,868
MXNZ00000000 SRR1814257 BCW_1560 S. enterica 6,7:z41:1,7 64 4,633,237
MXNY00000000 SRR1814258 BCW_1561 S. enterica 11:a:1,5 43 4,644,332
MXNX00000000 SRR1814259 BCW_1562 S. enterica 6,14,25:a:e,n,x 110 4,721,527
MXNW00000000 SRR1060717 BCW_1564 S. enterica Typhimurium 83 4,983,291
MXNV00000000 SRR1814260 BCW_1565 S. enterica Typhimurium 102 5,000,922
MXNU00000000 SRR1814261 BCW_1566 S. enterica Typhimurium 203 4,999,754
MXNT00000000 SRR1060716 BCW_1567 S. enterica Typhimurium 70 4,992,425
MXNR00000000 SRR1060713 BCW_1570 S. enterica Typhimurium 140 4,911,943
MXNQ00000000 SRR1060712 BCW_1571 S. enterica Typhimurium 109 4,970,709
MXNP00000000 SRR1840571 BCW_1572 S. enterica Typhimurium 238 5,018,296
MXNO00000000 SRR1840572 BCW_1573 S. enterica Typhimurium 212 5,021,665
MXNN00000000 SRR1122742 BCW_1574 S. enterica Typhimurium 80 4,963,252
MXNM00000000 SRR1122741 BCW_1575 S. enterica Typhimurium 88 4,906,288
MXNL00000000 SRR1840573 BCW_1578 S. enterica Typhimurium / DT104 122 4,959,585
MXNK00000000 SRR1060709 BCW_1580 S. enterica 4,[5],12:i:- 75 5,002,197
MXNJ00000000 SRR1060708 BCW_1581 S. enterica 4,[5],12:i:- 90 5,071,921
MXNI00000000 SRR1122739 BCW_1582 S. enterica 4,[5],12:i:- 69 4,892,165
MXNH00000000 SRR1060707 BCW_1583 S. enterica 4,[5],12:i:- 85 4,890,514
MXNG00000000 SRR1814262 BCW_1584 S. enterica 4,[5],12:i:- 56 4,676,580
MXNF00000000 SRR1814263 BCW_1585 S. enterica 4,[5],12:i:- 78 4,892,982
MXNE00000000 SRR1060706 BCW_1587 S. enterica Enteritidis 37 4,724,875
MXND00000000 SRR1122738 BCW_1588 S. enterica Enteritidis 33 4,732,603
MXNC00000000 SRR1122737 BCW_1589 S. enterica Saphra 56 4,618,391
MXNB00000000 SRR1060705 BCW_1590 S. enterica Rubislaw 38 4,536,667
MXNA00000000 SRR1060704 BCW_1591 S. enterica Michigan 50 4,766,654
MXMZ00000000 SRR1060703 BCW_1592 S. enterica Urbana 44 4,453,458
MXMY00000000 SRR1814264 BCW_1593 S. enterica Vietnam 95 4,899,647
MXMX00000000 SRR1060702 BCW_1594 S. enterica Tornow 59 4,804,520
MXMW00000000 SRR1060701 BCW_1595 S. enterica Gera 34 4,642,375
MXMV00000000 SRR1122735 BCW_1597 S. enterica Brisbane 41 4,821,806
MXMU00000000 SRR1122733 BCW_1599 S. enterica München 24 4,632,602
MXMT00000000 SRR1814265 BCW_1600 S. enterica Senftenberg 115 5,555,004
MXMS00000000 SRR1060700 BCW_1601 S. enterica Muenster 25 4,633,970
MXMR00000000 SRR1060699 BCW_1602 S. enterica Montevideo 51 4,742,041
MXMQ00000000 SRR1060698 BCW_1603 S. enterica Johannesburg 34 4,701,550
MXMP00000000 SRR1060697 BCW_1604 S. enterica Javiana 60 4,514,150
MXMO00000000 SRR1122732 BCW_1605 S. enterica Inverness 31 4,887,144
MXMN00000000 SRR1060696 BCW_1606 S. enterica Cubana 73 4,946,393
MXMM00000000 SRR1060695 BCW_1607 S. enterica Cerro 38 4,694,753
MXML00000000 SRR1060694 BCW_1608 S. enterica Alachua 44 4,757,395
MXMK00000000 SRR1814267 BCW_1629 S. enterica Arizonae 54 4,603,290
MXMJ00000000 SRR1814268 BCW_1640 S. enterica Arizonae 96 4,495,589
MXMI00000000 SRR1814269 BCW_1731 S. enterica Thompson 51 4,446,777
MXMH00000000 SRR1814270 BCW_1733 S. enterica Thompson 43 5,012,234
MXMF00000000 SRR1814271 BCW_1760 S. enterica Typhimurium 103 4,939,832
MXME00000000 SRR1814272 BCW_1769 S. enterica Typhimurium 84 4,864,337
MXMD00000000 SRR1814273 BCW_1776 S. enterica Saint Paul 45 4,767,634
MXMC00000000 SRR1840576 BCW_1800 S. enterica Paratyphi B 110 4,709,607
MXMB00000000 SRR1814274 BCW_1809 S. enterica Paratyphi B 52 4,606,360
MXMA00000000 SRR1840578 BCW_1811 S. enterica Paratyphi B 113 4,709,192
MXLZ00000000 SRR1840579 BCW_1812 S. enterica Paratyphi B 52 4,663,216
MXLY00000000 SRR1814275 BCW_1819 S. enterica München 79 4,811,983
MXLX00000000 SRR1814276 BCW_1833 S. enterica Choleraesuis 59 4,658,012
MXLW00000000 SRR1840580 BCW_1834 S. enterica Decateur 87 4,692,391
MXLV00000000 SRR1814277 BCW_1852 S. enterica Infantis 75 4,633,326
MXLT00000000 SRR1814278 BCW_1861 S. enterica München 61 4,715,517
MXLS00000000 SRR1814279 BCW_1862 S. enterica Newport 61 4,829,688
MXLR00000000 SRR1840582 BCW_1863 S. enterica Newport 89 4,888,597
MXLQ00000000 SRR1814280 BCW_1864 S. enterica Newport 132 5,318,034
MXLP00000000 SRR1840583 BCW_1870 S. enterica Paratyphi B 60 4,755,419
MXLO00000000 SRR1814281 BCW_1872 S. enterica Paratyphi B 56 4,655,098
MXLN00000000 SRR1814282 BCW_1877 S. enterica Pullorum 35 4,743,041
MXLM00000000 SRR1840585 BCW_1886 S. enterica Stanley 50 4,785,590
MXLK00000000 SRR1814283 BCW_1908 S. enterica 86 4,775,306
MXLI00000000 SRR1840591 BCW_1933 S. enterica 62 4,889,133
MXLH00000000 SRR1840593 BCW_1941 S. enterica 87 4,488,115
MXLG00000000 SRR1840595 BCW_1947 S. enterica 92 4,682,943
MXLF00000000 SRR1840597 BCW_1951 S. enterica 127 4,687,494
MXLD00000000 SRR1840599 BCW_1969 S. enterica 47 4,536,861
MXLC00000000 SRR1814284 BCW_1975 S. enterica Enteritidis 56 4,694,921
MXLB00000000 SRR1814285 BCW_1976 S. enterica Berta 80 4,768,086
MXLA00000000 SRR1814286 BCW_1977 S. enterica Dublin 89 5,052,403
MXKZ00000000 SRR1814287 BCW_1978 S. enterica Cerro 67 4,543,024
MXKY00000000 SRR1814288 BCW_1979 S. enterica Heidelberg 52 4,754,368
MXKX00000000 SRR1814289 BCW_1980 S. enterica Heidelberg 48 4,748,546
MXKW00000000 SRR1814290 BCW_1981 S. enterica Anatum 27 4,675,371
MXKV00000000 SRR1814291 BCW_1982 S. enterica 54 4,815,529
MXKU00000000 SRR1814292 BCW_1983 S. enterica Enteritidis 34 4,696,993
MXKT00000000 SRR1814293 BCW_1984 S. enterica Enteritidis 41 4,698,141
MXKS00000000 SRR1814294 BCW_1985 S. enterica Enteritidis 38 4,696,431
MXKR00000000 SRR1814295 BCW_1986 S. enterica Enteritidis 36 4,692,804
MXKQ00000000 SRR1814296 BCW_1987 S. enterica Enteritidis 39 4,696,439
MXKP00000000 SRR1814297 BCW_1988 S. enterica Enteritidis 41 4,805,642
MXKO00000000 SRR1814298 BCW_1989 S. enterica Enteritidis 60 4,550,842
MXKN00000000 SRR1814299 BCW_1990 S. enterica Enteritidis 45 4,817,009
MXKM00000000 SRR1814300 BCW_1991 S. enterica Enteritidis 26 4,724,222
MXKL00000000 SRR1814301 BCW_1992 S. enterica Enteritidis 29 4,792,749
MXKK00000000 SRR1814302 BCW_1993 S. enterica Dublin 48 4,941,697
MXKJ00000000 SRR1814303 BCW_1994 S. enterica 37 4,712,333
MXKI00000000 SRR1814304 BCW_1995 S. enterica Kentucky 56 4,720,714
MXKH00000000 SRR1814305 BCW_1996 S. enterica 39 4,714,017
MXKG00000000 SRR1814306 BCW_1997 S. enterica Cerro 39 4,545,913
MXKF00000000 SRR1814307 BCW_1998 S. enterica 108 4,698,466
MXKE00000000 SRR1814308 BCW_1999 S. enterica Montevideo 33 4,593,636
MXKB00000000 SRR1814311 BCW_2003 S. enterica Menhaden 43 4,662,475
MXKA00000000 SRR1814312 BCW_2004 S. enterica Give 95 4,563,009
MXJZ00000000 SRR1814313 BCW_2005 S. enterica 35 4,543,254
MXJY00000000 SRR1814314 BCW_2008 S. enterica 82 5,119,710
MXJX00000000 SRR1814315 BCW_2010 S. enterica Kentucky 81 4,867,403
MXJV00000000 SRR1814317 BCW_2013 S. enterica Enteritidis 42 4,704,898
MXJU00000000 SRR1814319 BCW_2015 S. enterica Enteritidis 39 4,697,368
MXJT00000000 SRR1814320 BCW_2016 S. enterica 37 4,695,663
MXJS00000000 SRR1814321 BCW_2017 S. enterica Enteritidis 43 4,692,002
MXJR00000000 SRR1814322 BCW_2018 S. enterica Reading 14 4,573,738
MXJQ00000000 SRR1814323 BCW_2019 S. enterica Enteritidis 55 4,698,743
MXJP00000000 SRR1814324 BCW_2020 S. enterica Enteritidis 40 4,699,383
MXJO00000000 SRR1122673 BCW_2022 S. enterica Newport 85 4,855,366
MXJN00000000 SRR1060585 BCW_2024 S. enterica Heidelberg 71 4,979,333
MXJM00000000 SRR1060584 BCW_2025 S. enterica Typhimurium var. 5- 74 4,848,531
MXJL00000000 SRR1122671 BCW_2026 S. enterica Hadar 218 4,721,180
MXJK00000000 SRR1060583 BCW_2028 S. enterica Agona 42 4,839,359
MXJJ00000000 SRR1122669 BCW_2029 S. enterica 4,[5],12:r:- 51 4,871,561
MXJI00000000 SRR1122668 BCW_2030 S. enterica 4,12:d:- 132 5,071,832
MXJH00000000 SRR1122667 BCW_2031 S. enterica 4,[5],12:r:- 64 4,865,995
MXJG00000000 SRR1814325 BCW_2032 S. enterica 4,[5],12:r:- 58 4,951,606
MXJF00000000 SRR1060582 BCW_2033 S. enterica Schwarzengrund 40 4,808,106
MXJE00000000 SRR1060581 BCW_2034 S. enterica Alachua 52 4,804,786
MXJD00000000 SRR1122666 BCW_2035 S. enterica Typhimurium var. 5- 111 5,030,715
MXJC00000000 SRR1060580 BCW_2036 S. enterica Typhimurium var. 5- 182 5,107,767
MXJB00000000 SRR1060579 BCW_2037 S. enterica Worthington 90 5,177,860
MXJA00000000 SRR1060578 BCW_2038 S. enterica Derby 74 4,905,930
MXIZ00000000 SRR1122665 BCW_2039 S. enterica Enteritidis 89 4,703,711
MXIY00000000 SRR1060577 BCW_2040 S. enterica Kentucky 268 4,860,286
MXIX00000000 SRR1122664 BCW_2042 S. enterica Infantis 87 4,852,561
MXIW00000000 SRR1840600 BCW_2044 S. enterica 4,[5],12:i:- 162 4,888,737
MXIV00000000 SRR1122662 BCW_2045 S. enterica 4,[5],12:i:- 280 4,876,792
MXIU00000000 SRR1122661 BCW_2046 S. enterica 4,12:d:- 115 5,064,568
MXIT00000000 SRR1122660 BCW_2047 S. enterica Oranienburg 45 4,745,797
MXIS00000000 SRR1122659 BCW_2048 S. enterica Enteritidis 70 4,605,223
MXIR00000000 SRR1122658 BCW_2049 S. enterica Infantis 56 4,636,349
MXIQ00000000 SRR1122657 BCW_2050 S. enterica Typhimurium var. 5- 104 5,119,486
MXIP00000000 SRR1122656 BCW_2051 S. enterica 4,[5],12:r:- 65 4,868,669
MXIN00000000 SRR1840601 BCW_2053 S. enterica Derby 85 4,835,910
MXIM00000000 SRR1060576 BCW_2054 S. enterica Typhimurium var. 5- 68 4,952,695
MXIL00000000 SRR1060575 BCW_2055 S. enterica Saint Paul 85 4,823,504
MXIK00000000 SRR1840602 BCW_2056 S. enterica 18:z4,z23:- 102 4,563,960
MXIJ00000000 SRR1122654 BCW_2057 S. enterica Newport 239 4,715,388
MXII00000000 SRR1122653 BCW_2058 S. enterica Schwarzengrund 140 4,908,833
MXIH00000000 SRR1122650 BCW_2059 S. enterica 18:z4,z23:- 269 4,981,191
MXIG00000000 SRR1122648 BCW_2064 S. enterica Typhimurium var. 5- 73 4,941,624
MXIF00000000 SRR1122647 BCW_2065 S. enterica Typhimurium var. 5- 84 4,952,792
MXIB00000000 SRR1060574 BCW_2070 S. enterica Kentucky 85 4,865,027
MXIA00000000 SRR1060573 BCW_2071 S. enterica Schwarzengrund 50 4,673,750
MXHZ00000000 SRR1060572 BCW_2073 S. enterica Typhimurium var. 5- 60 4,921,867
MXHY00000000 SRR1122645 BCW_2074 S. enterica Hadar 52 4,732,446
MXHX00000000 SRR1122643 BCW_2077 S. enterica Albert 126 5,141,960
MXHW00000000 SRR1106607 BCW_2079 S. enterica Agona 70 4,763,712
MXHV00000000 SRR1106606 BCW_2083 S. enterica Derby 113 4,792,186
MXHT00000000 SRR1106605 BCW_2085 S. enterica Typhimurium 116 4,865,658
MXHS00000000 SRR1060571 BCW_2086 S. enterica Hadar 71 4,642,911
MXHR00000000 SRR1060570 BCW_2087 S. enterica Schwarzengrund 33 4,756,339
MXHQ00000000 SRR1060569 BCW_2088 S. enterica 18:z4,z23:- 65 4,487,872
MXHP00000000 SRR1840603 BCW_2090 S. enterica 18:z4,z23:- 123 4,487,102
MXHO00000000 SRR1840604 BCW_2092 S. enterica 6,7:k:- 54 4,709,630
MXHN00000000 SRR1122636 BCW_2093 S. enterica Kentucky 181 4,852,382
MXHG00000000 SRR1106600 BCW_2104 S. enterica Anatum 79 4,698,790
MXHE00000000 SRR1122629 BCW_2112 S. enterica 6,7:lw:- 36 4,687,914
MXHD00000000 SRR1106598 BCW_2115 S. enterica Kentucky 165 5,095,529
MXHC00000000 SRR1106597 BCW_2120 S. enterica Typhimurium var. 5- 256 4,992,470
MXGZ00000000 SRR1106595 BCW_2124 S. enterica Senftenberg 96 4,852,968
MXGX00000000 SRR1840612 BCW_2127 S. enterica Typhimurium var. 5- 119 4,855,797
MXGV00000000 SRR1106593 BCW_2130 S. enterica Berta 62 4,891,577
MXGU00000000 SRR1106592 BCW_2131 S. enterica Typhimurium var. 5- 154 4,960,828
MXGT00000000 SRR1122620 BCW_2132 S. enterica Albany 39 4,731,428
MXGS00000000 SRR1106591 BCW_2133 S. enterica Kentucky 168 5,020,798
MXGR00000000 SRR1106590 BCW_2134 S. enterica Agona 144 4,866,625
MXGP00000000 SRR1840613 BCW_2136 S. enterica Saint Paul 63 4,760,305
MXGO00000000 SRR1840614 BCW_2142 S. enterica Agona 261 4,884,775
MXGN00000000 SRR1840615 BCW_2146 S. enterica Typhimurium var. 5- 103 5,067,207
MXGM00000000 SRR1840616 BCW_2147 S. enterica Agona 117 4,857,781
MXGL00000000 SRR1840617 BCW_2152 S. enterica Senftenberg 67 4,844,931
MXGK00000000 SRR1122608 BCW_2153 S. enterica Kentucky 72 4,666,800
MXGJ00000000 SRR1060567 BCW_2159 S. enterica Ohio 46 4,696,704
MXGH00000000 SRR1106585 BCW_2161 S. enterica Kentucky 95 4,896,056
MXGG00000000 SRR1060566 BCW_2163 S. enterica Typhimurium var. 5- 71 5,009,952
MXGF00000000 SRR1060565 BCW_2166 S. enterica Saint Paul 70 4,775,983
MXGE00000000 SRR1060564 BCW_2167 S. enterica Saint Paul 135 5,073,352
MXGD00000000 SRR1060563 BCW_2168 S. enterica Agona 90 4,847,823
MXGC00000000 SRR1060562 BCW_2170 S. enterica München 63 4,739,641
MXGB00000000 SRR1840620 BCW_2171 S. enterica Reading 188 4,708,211
MXGA00000000 SRR1060561 BCW_2172 S. enterica Typhimurium var. 5- 94 4,984,682
MXFY00000000 SRR1060560 BCW_2174 S. enterica Kentucky 166 5,164,127
MXFW00000000 SRR1106583 BCW_2176 S. enterica Schwarzengrund 54 4,795,405
MXFV00000000 SRR1814326 BCW_2177 S. enterica Typhimurium var. 5- 86 4,995,416
MXFU00000000 SRR1122602 BCW_2178 S. enterica Saint Paul 129 5,018,003
MXFT00000000 SRR1060559 BCW_2179 S. enterica Saint Paul 94 4,934,599
MXFQ00000000 SRR1060557 BCW_2183 S. enterica Hadar 59 4,852,413
MXFP00000000 SRR1060555 BCW_2185 S. enterica Kentucky 54 4,874,084
MXFO00000000 SRR1060554 BCW_2186 S. enterica Alachua 61 5,056,195
MXFN00000000 SRR1060553 BCW_2187 S. enterica Typhimurium var. 5- 68 5,014,429
MXFM00000000 SRR1060552 BCW_2188 S. enterica Hadar 63 4,786,573
MXFL00000000 SRR1060551 BCW_2190 S. enterica Berta 43 4,880,870
MXFK00000000 SRR1060550 BCW_2191 S. enterica Berta 35 4,883,573
MXFJ00000000 SRR1060549 BCW_2192 S. enterica Typhimurium var. 5- 70 4,951,275
MXFI00000000 SRR1840623 BCW_2193 S. enterica Mbandaka 64 4,752,709
MXFH00000000 SRR1060548 BCW_2194 S. enterica Berta 66 4,819,865
MXFG00000000 SRR1060547 BCW_2195 S. enterica Enteritidis 57 4,704,676
MXFF00000000 SRR1060546 BCW_2196 S. enterica Typhimurium 121 4,885,303
MXFE00000000 SRR1060545 BCW_2198 S. enterica Saint Paul 87 4,970,010
MXFD00000000 SRR1122599 BCW_2199 S. enterica Derby 61 4,960,626
MXFC00000000 SRR1060544 BCW_2200 S. enterica Kentucky 78 4,759,417
MXFB00000000 SRR1060543 BCW_2201 S. enterica Infantis 41 4,707,923
MXFA00000000 SRR1060542 BCW_2202 S. enterica Kentucky 65 4,914,536
MXEZ00000000 SRR1060541 BCW_2203 S. enterica Brandenburg 53 5,007,057
MXEY00000000 SRR1106582 BCW_2205 S. enterica Schwarzengrund 199 4,793,032
MXEX00000000 SRR1840625 BCW_2208 S. enterica Litchfield 112 4,690,460
MXEW00000000 SRR1814328 BCW_2209 S. enterica Hadar 66 4,769,161
MXEV00000000 SRR1840626 BCW_2210 S. enterica Typhimurium 124 5,052,611
MXEU00000000 SRR1840628 BCW_2213 S. enterica Mbandaka 63 4,747,779
MXES00000000 SRR1060540 BCW_2216 S. enterica Kentucky 89 4,964,951
MXER00000000 SRR1840629 BCW_2217 S. enterica Braenderup 156 4,696,916
MXEQ00000000 SRR1840630 BCW_2218 S. enterica Typhimurium 116 4,931,438
MXEP00000000 SRR1840631 BCW_2220 S. enterica Kentucky 294 5,247,031
MXEO00000000 SRR1060539 BCW_2225 S. enterica Kentucky 158 4,996,872
MXEN00000000 SRR1814329 BCW_2226 S. enterica Agona 65 4,876,082
MXEM00000000 SRR1814330 BCW_2227 S. enterica Kentucky 125 5,013,946
MXEL00000000 SRR1060538 BCW_2228 S. enterica Senftenberg 72 4,899,799
MXEK00000000 SRR1122587 BCW_2233 S. enterica 18:z4,z23:- 64 4,470,177
MXEJ00000000 SRR1122585 BCW_2235 S. enterica Infantis 59 4,679,403
MXEI00000000 SRR1060536 BCW_2237 S. enterica Infantis 47 4,595,710
MXEH00000000 SRR1122583 BCW_2238 S. enterica 4,12:d:- 83 5,053,556
MXEG00000000 SRR1814331 BCW_2239 S. enterica Senftenberg 73 5,117,613
MXEF00000000 SRR1840632 BCW_2242 S. enterica Derby 118 4,945,102
MXEE00000000 SRR1060535 BCW_2243 S. enterica Typhimurium var. 5- 67 4,930,988
MXED00000000 SRR1814332 BCW_2244 S. enterica Typhimurium var. 5- 76 4,884,447
MXEB00000000 SRR1060534 BCW_2247 S. enterica Typhimurium var. 5- 138 5,090,978
MXEA00000000 SRR1060533 BCW_2248 S. enterica Uganda 23 4,728,649
MXDZ00000000 SRR1122579 BCW_2249 S. enterica Kentucky 72 4,911,929
MXDY00000000 SRR1840634 BCW_2250 S. enterica Kentucky 83 4,909,888
MXDX00000000 SRR1106580 BCW_2251 S. enterica Heidelberg 81 4,965,326
MXDV00000000 SRR1840635 BCW_2427 S. enterica Typhimurium 149 4,988,609
MXDU00000000 SRR1118721 BCW_2428 S. enterica Kentucky 274 4,876,579
MXDT00000000 SRR1840636 BCW_2429 S. enterica Enteritidis 91 4,700,612
MXDS00000000 SRR1118719 BCW_2431 S. enterica Reading 186 4,576,842
MXDP00000000 SRR1814401 BCW_2435 S. enterica Typhimurium 59 5,050,726
MXDO00000000 SRR1814402 BCW_2436 S. enterica Agona 96 4,948,449
MXDN00000000 SRR1814403 BCW_2438 S. enterica Reading 46 4,572,225
MXDM00000000 SRR1118717 BCW_2439 S. enterica Dublin 62 4,569,337
MXDL00000000 SRR1814407 BCW_2448 S. enterica Enteritidis 28 4,723,091
MXDK00000000 SRR1840638 BCW_2462 S. enterica Heidelberg 73 4,865,021
MXDI00000000 SRR1840640 BCW_2465 S. enterica 4,12:r:- 130 4,878,304
MXDH00000000 SRR1840641 BCW_2466 S. enterica Heidelberg 88 4,749,754
MXDG00000000 SRR1840642 BCW_2467 S. enterica 4,[5],12:r:- 102 4,749,033
MXDF00000000 SRR1840643 BCW_2468 S. enterica 4,12:r:- 287 4,833,793
MXDE00000000 SRR1840644 BCW_2469 S. enterica 4,12:r:- 97 4,882,563
MXDD00000000 SRR1840646 BCW_2471 S. enterica Heidelberg 77 4,783,615
MXDB00000000 SRR1840648 BCW_2473 S. enterica Heidelberg 178 4,944,435
MXDA00000000 SRR1840649 BCW_2474 S. enterica 4,[5],12:r:- 171 4,831,626
MXCZ00000000 SRR1840650 BCW_2475 S. enterica Heidelberg 70 4,715,089
MXCY00000000 SRR1814408 BCW_2476 S. enterica 4,[5],12:r:- 62 5,017,787
MXCX00000000 SRR1814409 BCW_2479 S. enterica 4,[5],12:r:- 76 4,849,862
MXCW00000000 SRR1814410 BCW_2480 S. enterica 4,[5],12:r:- 48 4,870,653
MXCV00000000 SRR1814411 BCW_2481 S. enterica Kentucky 84 4,883,278
MXCU00000000 SRR1814412 BCW_2482 S. enterica Kentucky 63 4,906,038
MXCT00000000 SRR1814413 BCW_2483 S. enterica Kentucky 110 5,011,557
MXCS00000000 SRR1814414 BCW_2484 S. enterica Kentucky 104 4,849,792
MXCR00000000 SRR1814415 BCW_2485 S. enterica Kentucky 96 4,877,690
MXCQ00000000 SRR1814416 BCW_2486 S. enterica Kentucky 82 4,768,009
MXCO00000000 SRR1814418 BCW_2488 S. enterica Kentucky 85 4,823,147
MXCN00000000 SRR1840651 BCW_2494 S. enterica Montevideo 50 4,575,737
MXCM00000000 SRR1814419 BCW_2499 S. enterica Newport 48 4,693,575
MXCL00000000 SRR1814420 BCW_2503 S. enterica Schwarzengrund 32 4,653,488
MXCK00000000 SRR1814421 BCW_2505 S. enterica Schwarzengrund 28 4,550,113
MXCJ00000000 SRR1814422 BCW_2506 S. enterica Schwarzengrund 58 4,632,186
MXCI00000000 SRR1814423 BCW_2507 S. enterica Schwarzengrund 51 4,775,212
MXCH00000000 SRR1814424 BCW_2511 S. enterica Saint Paul 84 4,760,198
MXCG00000000 SRR1814425 BCW_2512 S. enterica Saint Paul 72 4,895,102
MXCF00000000 SRR1814426 BCW_2513 S. enterica Typhimurium var. 5- (Copenhagen) 93 4,972,908
MXCE00000000 SRR1814427 BCW_2514 S. enterica Typhimurium 97 4,970,108
MXCD00000000 SRR1814428 BCW_2515 S. enterica Typhimurium var. 5- (Copenhagen) 89 5,076,760
MXCC00000000 SRR1814429 BCW_2516 S. enterica Typhimurium var. 5- (Copenhagen) 93 4,933,358
MXCB00000000 SRR1814430 BCW_2517 S. enterica Typhimurium var. 5- (Copenhagen) 113 4,989,771
MXCA00000000 SRR1814431 BCW_2518 S. enterica Typhimurium 96 4,862,943
MXBZ00000000 SRR1814432 BCW_2523 S. enterica Typhimurium 99 4,838,556
MXBY00000000 SRR1814433 BCW_2524 S. enterica Untypeable 103 5,073,979
MXBX00000000 SRR1840652 BCW_2526 S. enterica Typhimurium var. 5- (Copenhagen) 161 4,847,806
MXBW00000000 SRR1814434 BCW_2530 S. enterica Typhimurium var. 5- (Copenhagen) 66 5,152,485
MXBV00000000 SRR1814435 BCW_2531 S. enterica Typhimurium var. 5- (Copenhagen) 78 4,889,000
MXBU00000000 SRR1814436 BCW_2534 S. enterica Hadar 67 4,746,391
MXBS00000000 SRR1814437 BCW_2538 S. enterica 4,[5],12:i:- 90 4,899,295
MXBR00000000 SRR1814438 BCW_2539 S. enterica 4,[5],12:i:- 98 4,943,844
MXBQ00000000 SRR1814439 BCW_2540 S. enterica 4,[5],12:i:- 99 4,995,833
MXBP00000000 SRR1814440 BCW_2541 S. enterica 4,[5],12:i:- 79 4,939,231
MXBO00000000 SRR1814441 BCW_2544 S. enterica Enteritidis 44 4,653,716
MXBN00000000 SRR1814442 BCW_2549 S. enterica Enteritidis 30 4,680,867
MXBM00000000 SRR1814443 BCW_2550 S. enterica Enteritidis 19 4,635,591
MXBL00000000 SRR1814444 BCW_2551 S. enterica Enteritidis 38 4,697,132
MXBK00000000 SRR1814445 BCW_2553 S. enterica Enteritidis 33 4,729,148
MXBJ00000000 SRR1814446 BCW_2556 S. enterica Enteritidis 33 4,728,640
MXBI00000000 SRR1814447 BCW_2557 S. enterica Enteritidis 35 4,729,728
MXBH00000000 SRR1840654 BCW_2558 S. enterica Enteritidis 280 4,782,602
MXBG00000000 SRR1814448 BCW_2559 S. enterica Enteritidis 36 4,726,483
MXBF00000000 SRR1814449 BCW_2561 S. enterica Enteritidis 52 4,727,710
MYFD00000000 SRR1814450 BCW_2566 S. enterica Enteritidis 47 4,747,501
MYFB00000000 SRR1814451 BCW_2568 S. enterica Enteritidis 40 4,729,733
MYFA00000000 SRR1814452 BCW_2569 S. enterica Enteritidis 48 4,695,999
MYEZ00000000 SRR1814453 BCW_2570 S. enterica Enteritidis 34 4,745,925
MYEY00000000 SRR1814454 BCW_2577 S. enterica Enteritidis 30 4,729,817
MYEW00000000 SRR1840658 BCW_2599 S. enterica 99 4,714,600
MYEV00000000 SRR1840659 BCW_2600 S. enterica 60 4,663,760
MYEU00000000 SRR1840660 BCW_2605 S. enterica 148 4,939,925
MYET00000000 SRR1840662 BCW_2615 S. enterica Montevideo 57 4,726,958
MYES00000000 SRR1118716 BCW_2617 S. enterica Mbandaka 47 4,767,147
MYER00000000 SRR1118715 BCW_2618 S. enterica 4,[5],12:i:- 58 4,904,890
MYEQ00000000 SRR1118713 BCW_2622 S. enterica Arizonae 88 4,657,531
MYEP00000000 SRR1118712 BCW_2623 S. enterica Reading 26 4,567,211
MYEO00000000 SRR1118711 BCW_2626 S. enterica 57 4,959,566
MYEN00000000 SRR1118710 BCW_2627 S. enterica Choleraesuis 70 4,771,646
MYEM00000000 SRR1814456 BCW_2628 S. enterica Typhimurium 85 4,957,007
MYEL00000000 SRR1814457 BCW_2629 S. enterica 70 4,795,178
MYEK00000000 SRR1840663 BCW_2631 S. enterica Abaetetuba 213 5,149,627
MYEJ00000000 SRR1814458 BCW_2632 S. enterica Abaetetuba 70 4,723,483
MYEI00000000 SRR1118709 BCW_2634 S. enterica Albany 67 4,897,262
MYEH00000000 SRR1118708 BCW_2635 S. enterica Amager 50 4,861,879
MYEG00000000 SRR1118707 BCW_2636 S. enterica Amager 135 5,314,156
MYEF00000000 SRR1118706 BCW_2637 S. enterica Anatum 58 4,758,918
MYEE00000000 SRR1118705 BCW_2638 S. enterica Anatum 59 4,867,006
MYED00000000 SRR1814459 BCW_2639 S. enterica Anatum 75 4,952,470
MYEC00000000 SRR1814460 BCW_2641 S. enterica Apapa 45 4,686,719
MYEB00000000 SRR1118703 BCW_2642 S. enterica Augustenborg 112 4,720,068
MYEA00000000 SRR1118702 BCW_2643 S. enterica Bardo 84 5,027,341
MYDZ00000000 SRR1118700 BCW_2645 S. enterica Bareilly 52 4,735,368
MYDY00000000 SRR1814461 BCW_2646 S. enterica Blockley 65 4,809,216
MYDX00000000 SRR1118699 BCW_2647 S. enterica Bonariensis 71 4,711,716
MYDW00000000 SRR1814462 BCW_2649 S. enterica Braenderup 65 4,676,610
MYDV00000000 SRR1814463 BCW_2650 S. enterica Braenderup 68 4,841,305
MYDU00000000 SRR1118696 BCW_2652 S. enterica Brandenburg 41 4,620,824
MYDT00000000 SRR1814464 BCW_2653 S. enterica Bredeney 65 4,773,200
MYDS00000000 SRR1118695 BCW_2654 S. enterica Cerro 64 4,563,987
MYDR00000000 SRR1118694 BCW_2655 S. enterica Cerro 60 4,531,988
MYDQ00000000 SRR1118693 BCW_2656 S. enterica Chandans 29 4,592,734
MYDP00000000 SRR1814465 BCW_2657 S. enterica Choleraesuis 97 4,814,979
MYDO00000000 SRR1814466 BCW_2658 S. enterica Choleraesuis 80 4,910,586
MYDN00000000 SRR1118692 BCW_2661 S. enterica Colindale 55 4,700,842
MYDM00000000 SRR1106513 BCW_2663 S. enterica Concord 86 5,075,580
MYDL00000000 SRR1106512 BCW_2664 S. enterica Concord 102 5,086,582
MYDK00000000 SRR1106510 BCW_2666 S. enterica Concord 64 5,233,304
MYDJ00000000 SRR1106508 BCW_2669 S. enterica Corvallis 33 4,735,043
MYDI00000000 SRR1106507 BCW_2671 S. enterica Derby 78 4,758,580
MYDH00000000 SRR1840664 BCW_2673 S. enterica Derby 138 4,882,582
MYDG00000000 SRR1106505 BCW_2674 S. enterica Derby 76 4,850,410
MYDF00000000 SRR1106504 BCW_2676 S. enterica Dublin 223 4,867,078
MYDE00000000 SRR1106503 BCW_2677 S. enterica Dublin 61 4,873,287
MYDD00000000 SRR1106502 BCW_2678 S. enterica Elizabethville 59 4,693,262
MYDC00000000 SRR1106501 BCW_2679 S. enterica Enteritidis 28 4,746,785
MYDB00000000 SRR1106500 BCW_2680 S. enterica Enteritidis 44 4,750,564
MYDA00000000 SRR1106499 BCW_2681 S. enterica Enteritidis 69 4,790,998
MYCZ00000000 SRR1106498 BCW_2682 S. enterica Enteritidis 36 4,805,531
MYCY00000000 SRR1106497 BCW_2684 S. enterica Enteritidis 35 4,692,711
MYCX00000000 SRR1106496 BCW_2685 S. enterica Enteritidis 42 4,702,025
MYCW00000000 SRR1106495 BCW_2686 S. enterica Enteritidis 67 4,866,604
MYCV00000000 SRR1106494 BCW_2687 S. enterica Enteritidis 53 4,699,274
MYCU00000000 SRR1106493 BCW_2688 S. enterica Give 58 4,667,640
MYCT00000000 SRR1106492 BCW_2689 S. enterica Hadar 39 4,840,854
MYCS00000000 SRR1106491 BCW_2690 S. enterica Hadar 53 4,649,581
MYCR00000000 SRR1106490 BCW_2691 S. enterica Haifa 88 4,934,644
MYCQ00000000 SRR1106489 BCW_2692 S. enterica Haifa 82 4,817,105
MYCP00000000 SRR1106488 BCW_2694 S. enterica Havana 68 4,711,484
MYCO00000000 SRR1106487 BCW_2695 S. enterica Havana 51 4,708,992
MYCN00000000 SRR1106486 BCW_2696 S. enterica Havana 56 4,702,412
MYCM00000000 SRR1106485 BCW_2697 S. enterica Heidelberg 55 4,855,766
MYCL00000000 SRR1106484 BCW_2698 S. enterica Infantis 157 5,031,662
MYCK00000000 SRR1106483 BCW_2699 S. enterica Infantis 86 4,685,641
MYCJ00000000 SRR1106482 BCW_2700 S. enterica Infantis 51 4,664,083
MYCI00000000 SRR1106481 BCW_2701 S. enterica Infantis 45 4,659,770
MYCH00000000 SRR1106480 BCW_2702 S. enterica Infantis 78 4,944,920
MYCG00000000 SRR1106479 BCW_2703 S. enterica Isangi 51 4,647,115
MYCF00000000 SRR1106478 BCW_2704 S. enterica Istanbul 76 4,828,760
MYCE00000000 SRR1106477 BCW_2705 S. enterica Itami 61 4,665,092
MYCD00000000 SRR1106476 BCW_2706 S. enterica Javiana 38 4,618,987
MYCC00000000 SRR1106475 BCW_2707 S. enterica Javiana 39 4,533,521
MYCB00000000 SRR1106474 BCW_2708 S. enterica Jukestown 51 4,790,000
MYCA00000000 SRR1106473 BCW_2709 S. enterica Kambole 60 4,876,616
MYBZ00000000 SRR1106472 BCW_2710 S. enterica Kedougou 54 4,768,433
MYBY00000000 SRR1106471 BCW_2711 S. enterica Kedougou 200 4,821,733
MYBX00000000 SRR1106470 BCW_2712 S. enterica Kedougou 99 4,770,857
MYBW00000000 SRR1106469 BCW_2713 S. enterica Kedougou 85 4,766,820
MYBV00000000 SRR1840665 BCW_2714 S. enterica Kedougou 264 4,766,326
MYBT00000000 SRR1106467 BCW_2716 S. enterica Kentucky 48 4,801,445
MYBS00000000 SRR1106466 BCW_2718 S. enterica Kentucky 56 4,808,879
MYBR00000000 SRR1106465 BCW_2719 S. enterica Kentucky 45 4,663,128
MYBP00000000 SRR1106464 BCW_2721 S. enterica Kentucky 71 4,818,522
MYBO00000000 SRR1106463 BCW_2722 S. enterica Kentucky 65 4,818,813
MYBN00000000 SRR1106462 BCW_2723 S. enterica Litchfield 56 4,737,205
MYBM00000000 SRR1106461 BCW_2724 S. enterica Litchfield 57 4,680,881
MYBL00000000 SRR1106460 BCW_2725 S. enterica London 66 4,484,878
MYBK00000000 SRR1106459 BCW_2726 S. enterica Manhattan 41 4,598,525
MYBJ00000000 SRR1106458 BCW_2727 S. enterica Mbandaka 52 4,691,795
MYBI00000000 SRR1106457 BCW_2728 S. enterica Mbandaka 73 4,788,764
MYBH00000000 SRR1106456 BCW_2729 S. enterica Mbandaka 79 4,829,236
MYBG00000000 SRR1106455 BCW_2730 S. enterica Mbandaka 39 4,710,563
MYBF00000000 SRR1106454 BCW_2731 S. enterica Mbandaka 47 4,707,171
MYBE00000000 SRR1106453 BCW_2732 S. enterica Mgulani 78 4,671,749
MYBD00000000 SRR1106452 BCW_2733 S. enterica Minnesota 58 4,503,850
MYBC00000000 SRR1106451 BCW_2734 S. enterica Monschaui 100 4,655,764
MYBB00000000 SRR1106450 BCW_2735 S. enterica Montevideo 53 4,750,631
MYBA00000000 SRR1106449 BCW_2736 S. enterica München 292 4,863,765
MYAZ00000000 SRR1840668 BCW_2737 S. enterica München 41 4,673,445
MYAX00000000 SRR1840670 BCW_2739 S. enterica Muenster 66 4,740,976
MYAW00000000 SRR1840671 BCW_2740 S. enterica Muenster 122 4,700,713
MYAV00000000 SRR1840672 BCW_2742 S. enterica Newport 61 4,695,590
MYAU00000000 SRR1106447 BCW_2744 S. enterica Newport 65 5,142,466
MYAS00000000 SRR1106446 BCW_2746 S. enterica Newport 88 4,860,719
MYAN00000000 SRR1106441 BCW_2751 S. enterica Oranienburg 219 5,097,962
MYAM00000000 SRR1106440 BCW_2752 S. enterica Oranienburg 158 4,849,703
MYAL00000000 SRR1106439 BCW_2753 S. enterica Oritamerin 81 4,621,290
MYAH00000000 SRR1106435 BCW_2757 S. enterica Paratyphi B 141 4,706,118
MYAG00000000 SRR1840675 BCW_2758 S. enterica Paratyphi B var. Java 59 4,702,864
MYAF00000000 SRR1106434 BCW_2759 S. enterica Paratyphi B var. Java 99 5,096,972
MYAE00000000 SRR1106433 BCW_2760 S. enterica Pomona 227 5,055,949
MYAD00000000 SRR1840676 BCW_2761 S. enterica Poona 249 4,648,326
MYAB00000000 SRR1106431 BCW_2763 S. enterica Reading 128 4,758,916
MXZY00000000 SRR1106428 BCW_2766 S. enterica Rissen 175 5,003,307
MXZX00000000 SRR1814467 BCW_2768 S. enterica Rubislaw 62 4,905,093
MXZU00000000 SRR1106427 BCW_2771 S. enterica Saint Paul 136 4,707,964
MXZT00000000 SRR1106426 BCW_2772 S. enterica San Diego 119 4,831,928
MXZS00000000 SRR1106425 BCW_2774 S. enterica Schwarzengrund 64 4,834,942
MXZR00000000 SRR1840679 BCW_2775 S. enterica Schwarzengrund 217 4,860,758
MXZQ00000000 SRR1106424 BCW_2776 S. enterica Schwarzengrund 286 4,879,269
MXZN00000000 SRR1106422 BCW_2780 S. enterica Singapore 55 4,662,807
MXZM00000000 SRR1106421 BCW_2782 S. enterica Stanley 63 4,761,423
MXZL00000000 SRR1106419 BCW_2784 S. enterica Stanley 244 4,736,680
MXZK00000000 SRR1106417 BCW_2786 S. enterica Stanley 266 4,799,495
MXZI00000000 SRR1106416 BCW_2788 S. enterica subsp. salamae 55:k:z39 282 4,986,449
MXZH00000000 SRR1840682 BCW_2789 S. enterica Tarshyne 67 4,711,926
MXZG00000000 SRR1106415 BCW_2791 S. enterica Thompson 93 4,701,530
MXZF00000000 SRR1106414 BCW_2793 S. enterica Typhimurium 119 4,930,059
MXZE00000000 SRR1106413 BCW_2794 S. enterica Typhimurium 66 4,656,858
MXZD00000000 SRR1106412 BCW_2795 S. enterica Typhimurium 98 5,036,379
MXZC00000000 SRR1840683 BCW_2796 S. enterica Typhimurium 89 4,858,717
MXZA00000000 SRR1106410 BCW_2798 S. enterica Typhimurium 217 4,953,050
MXYZ00000000 SRR1840684 BCW_2799 S. enterica Typhimurium 98 4,932,680
MXYY00000000 SRR1106409 BCW_2800 S. enterica Typhimurium 185 4,962,429
MXYX00000000 SRR1106408 BCW_2801 S. enterica Typhimurium 168 4,877,453
MXYV00000000 SRR1106405 BCW_2810 S. enterica Uganda 39 4,676,926
MXYT00000000 SRR1840686 BCW_2813 S. enterica Virchow 60 4,662,361
MXYS00000000 SRR1840687 BCW_2814 S. enterica Virchow 65 4,754,588
MXYR00000000 SRR1840688 BCW_2815 S. enterica Virchow 86 4,726,529
MXYQ00000000 SRR1840689 BCW_2816 S. enterica Virchow 61 4,044,751
MXYP00000000 SRR1840690 BCW_2817 S. enterica Virchow 64 4,770,834
MXYO00000000 SRR1840691 BCW_2818 S. enterica Virchow 42 4,691,104
MXYM00000000 SRR1840693 BCW_2820 S. enterica Weltevreden 246 4,930,717
MXYL00000000 SRR1106404 BCW_2821 S. enterica Westthampton 83 4,895,392
MXYK00000000 SRR1106403 BCW_2822 S. enterica Wilhemsburg 80 4,783,130
MXYJ00000000 SRR1106402 BCW_2823 S. enterica Worthington 98 4,912,515
MXYH00000000 SRR1106400 BCW_2825 S. enterica Typhimurium 130 4,959,161
MXYG00000000 SRR1106399 BCW_2826 S. enterica Bredeney 57 4,827,769
MXYF00000000 SRR1106398 BCW_2828 S. enterica Saint Paul 52 4,808,820
MXYE00000000 SRR1106397 BCW_2829 S. enterica Schwarzengrund 66 4,642,170
MXYD00000000 SRR1106396 BCW_2830 S. enterica Heidelberg 105 5,106,845
MXYC00000000 SRR1106395 BCW_2832 S. enterica Agona 100 4,893,250
MXYB00000000 SRR1106394 BCW_2833 S. enterica Dublin 57 4,965,626
MXXZ00000000 SRR1106392 BCW_2835 S. enterica Kohbu 292 4,715,511
MXXY00000000 SRR1106391 BCW_2836 S. enterica Typhimurium 222 4,990,088
MXXX00000000 SRR1106390 BCW_2837 S. enterica Hadar 226 4,681,491
MXXV00000000 SRR1106388 BCW_2839 S. enterica Derby 226 5,009,771
MXXU00000000 SRR1106387 BCW_2840 S. enterica Weltevreden 158 5,062,962
MXXS00000000 SRR1106384 BCW_2843 S. enterica Manhattan 155 4,619,391
MXXR00000000 SRR1106383 BCW_2844 S. enterica Enteritidis 68 4,828,067
MXXQ00000000 SRR1106382 BCW_2845 S. enterica Bovismorbificans 98 4,954,874
MXXO00000000 SRR1106380 BCW_2847 S. enterica Paratyphi var. Java 187 4,759,782
MXXN00000000 SRR1106379 BCW_2848 S. enterica Panama 178 4,878,820
MXXM00000000 SRR1057376 BCW_2849 S. enterica Cerro 43 4,555,858
MXXL00000000 SRR1106378 BCW_2850 S. enterica Havana 43 4,713,566
MXXK00000000 SRR1840695 BCW_2851 S. enterica Vinobrady 63 4,918,375
MXXJ00000000 SRR1106377 BCW_2852 S. enterica Singapore 92 4,803,394
MXXG00000000 SRR1840698 BCW_2855 S. enterica Corvallis 183 4,719,825
MXXF00000000 SRR1840699 BCW_2856 S. enterica Heidelberg 94 5,058,326
MXXD00000000 SRR1106375 BCW_2858 S. enterica Corvallis 76 5,020,070
MXXC00000000 SRR1106373 BCW_2860 S. enterica Enteritidis 70 4,805,910
MXXA00000000 SRR1840700 BCW_2862 S. enterica Saint Paul 81 4,795,014
MXWZ00000000 SRR1106371 BCW_2863 S. enterica Virchow 284 4,949,107
MXWY00000000 SRR1106370 BCW_2864 S. enterica Rissen 115 4,995,234
MXWX00000000 SRR1815421 BCW_2865 S. enterica Reading 71 4,791,130
MXWW00000000 SRR1057377 BCW_2866 S. enterica London 49 4,675,757
MXWU00000000 SRR1106368 BCW_2868 S. enterica 200 4,950,845
MXWT00000000 SRR1106367 BCW_2869 S. enterica Livingstone 147 4,875,591
MXWR00000000 SRR1106366 BCW_2871 S. enterica Mbandaka 37 4,752,847
MXWP00000000 SRR1106364 BCW_2873 S. enterica Poona 68 4,646,351
MXWO00000000 SRR1106362 BCW_2875 S. enterica Oranienburg 55 4,510,867
MXWN00000000 SRR1106361 BCW_2876 S. enterica Thompson 83 4,772,667
MXWL00000000 SRR1840702 BCW_2878 S. enterica Javiana 42 4,604,457
MXWK00000000 SRR1106359 BCW_2879 S. enterica Meleagridis 63 4,781,493
MXWI00000000 SRR1057378 BCW_2881 S. enterica Indiana 93 4,954,921
MXWG00000000 SRR1106357 BCW_2883 S. enterica Brandenburg 177 4,618,858
MXWF00000000 SRR1840704 BCW_2884 S. enterica Muenster 119 4,696,579
MXWE00000000 SRR1106356 BCW_2885 S. enterica Bredeney 52 4,608,344
MXWC00000000 SRR1057379 BCW_2888 S. enterica Albany 67 4,800,037
MXWB00000000 SRR1057380 BCW_2889 S. enterica Muenster 43 4,693,852
MXWA00000000 SRR1840705 BCW_2890 S. enterica Bareilly 61 4,665,185
MXVZ00000000 SRR1106354 BCW_2891 S. enterica Amsterdam 85 4,890,986
MXVY00000000 SRR1840706 BCW_2892 S. enterica Litchfield 55 4,657,614
MXVX00000000 SRR1106353 BCW_2893 S. enterica Senftenberg 270 4,962,330
MXVV00000000 SRR1106351 BCW_2895 S. enterica Kentucky 75 4,815,133
MXVU00000000 SRR1106350 BCW_2896 S. enterica 91 4,868,988
MXVT00000000 SRR1106349 BCW_2897 S. enterica Potsdam 216 4,885,282
MXVS00000000 SRR1106348 BCW_2898 S. enterica Haifa 84 4,785,248
MXVR00000000 SRR1106347 BCW_2899 S. enterica Derby 82 4,850,362
MXVP00000000 SRR1840707 BCW_2901 S. enterica Onireke 81 4,815,350
MXVO00000000 SRR1057381 BCW_2903 S. enterica Wippra 111 4,626,118
MXVN00000000 SRR1057382 BCW_2904 S. enterica Liverpool 107 4,766,047
MXVM00000000 SRR1815423 BCW_2905 S. enterica Sundsvall 71 4,585,166
MXVL00000000 SRR1815424 BCW_2906 S. enterica Enteritidis 47 4,809,276
MXVK00000000 SRR1815425 BCW_2907 S. enterica Eko 64 4,841,210
MXVJ00000000 SRR1057383 BCW_2908 S. enterica Colindale 74 4,725,716
MXVI00000000 SRR1815426 BCW_2909 S. enterica Give 57 4,688,146
MXVH00000000 SRR1815427 BCW_2910 S. enterica Hillingdon 84 4,821,141
MXVG00000000 SRR1815428 BCW_2911 S. enterica Stanley 44 4,723,201
MXVF00000000 SRR1815476 BCW_3047 S. enterica Typhimurium 99 4,885,253
MXVE00000000 SRR1815477 BCW_3048 S. enterica Enteritidis 73 4,688,373
MXVD00000000 SRR1815478 BCW_3049 S. enterica Choleraesuis 70 4,736,186
MXVC00000000 SRR1815479 BCW_3050 S. enterica Typhimurium 87 4,774,690
MXVB00000000 SRR1815480 BCW_3051 S. enterica Typhi 66 4,600,313
MXVA00000000 SRR1815481 BCW_3052 S. enterica Arizonae 43 4,476,515
MXUZ00000000 SRR1815482 BCW_3053 S. enterica Newport 111 4,797,267
MXUY00000000 SRR1815483 BCW_3054 S. enterica Montevideo 61 4,583,191
MXUX00000000 SRR1815484 BCW_3055 S. enterica 156 5,355,583
MXUW00000000 SRR1815485 BCW_3056 S. enterica Typhimurium 81 4,836,687
MXUV00000000 SRR1815486 BCW_3057 S. enterica Heidelberg 62 4,747,107
MXUU00000000 SRR1815487 BCW_3058 S. enterica Braenderup 63 4,716,473
MXUT00000000 SRR1815488 BCW_3059 S. enterica Diarizonae 85 5,132,730
MXUS00000000 SRR1815490 BCW_3061 S. enterica Enteritidis 44 4,720,354
MXUR00000000 SRR1815491 BCW_3062 S. enterica Typhimurium 83 4,897,532
MXUQ00000000 SRR1815492 BCW_3063 S. enterica Paratyphi A 45 4,538,215
MXUP00000000 SRR1815493 BCW_3064 S. enterica 90 4,772,312
MXUO00000000 SRR1815494 BCW_3065 S. enterica 73 4,738,706
MXUM00000000 SRR1815496 BCW_3067 S. enterica Anatum 51 4,665,925
MXUL00000000 SRR1815497 BCW_3068 S. enterica Javiana 48 4,551,675
MXUK00000000 SRR1815498 BCW_3069 S. enterica Abony 38 4,687,938
MXUJ00000000 SRR1815499 BCW_3070 S. enterica Indica 24 4,693,372
MXUI00000000 SRR1815500 BCW_3071 S. enterica Minnesota 36 4,546,028
MXUH00000000 SRR1815501 BCW_3072 S. enterica Java 71 4,812,521
MXUG00000000 SRR1815502 BCW_3073 S. enterica Abaetetuba 33 4,585,413
MXUF00000000 SRR1815503 BCW_3074 S. enterica Worthington 45 4,811,099
MXUE00000000 SRR1815504 BCW_3075 S. enterica Infantis 76 4,642,062
MXUD00000000 SRR1060499 BCW_3292 S. enterica Bovismorbificans 29 4,840,595
MXUC00000000 SRR1815577 BCW_3293 S. enterica Bovismorbificans 57 4,838,053
MXUB00000000 SRR1060498 BCW_3294 S. enterica Bovismorbificans 27 4,838,851
MXUA00000000 SRR1060497 BCW_3295 S. enterica Bovismorbificans 38 4,838,189
MXTZ00000000 SRR1060496 BCW_3296 S. enterica Bovismorbificans 54 4,840,673
MXTY00000000 SRR1060495 BCW_3297 S. enterica Bovismorbificans 45 4,844,119
MXTX00000000 SRR1815579 BCW_3299 S. enterica Bovismorbificans 53 4,839,381
MXTW00000000 SRR1815580 BCW_3300 S. enterica Bovismorbificans 203 4,838,812
MXTV00000000 SRR1057387 BCW_3304 S. enterica Bovismorbificans 56 4,629,526
MXTU00000000 SRR1057388 BCW_3305 S. enterica Bovismorbificans 47 4,566,185
MXTT00000000 SRR1057390 BCW_3307 S. enterica Bovismorbificans 44 4,569,540
MXTS00000000 SRR1057391 BCW_3308 S. enterica Bovismorbificans 50 4,572,698
MXTR00000000 SRR1840708 BCW_3309 S. enterica Bovismorbificans 29 4,846,253
MXTQ00000000 SRR1815583 BCW_3310 S. enterica Bovismorbificans 50 4,571,923
MXTP00000000 SRR1815584 BCW_3311 S. enterica Bovismorbificans 73 4,746,204
MXTO00000000 SRR1815585 BCW_3312 S. enterica Bovismorbificans 69 4,783,632
MXTN00000000 SRR1815641 BCW_3370 S. enterica Dublin 57 4,968,344
MXTL00000000 SRR1815642 BCW_3373 S. enterica Choleraesuis 173 4,732,627
MXTK00000000 SRR1815643 BCW_3376 S. enterica Newport 96 4,896,385
MXTJ00000000 SRR1840711 BCW_3379 S. enterica Newport 98 4,925,399
MXTI00000000 SRR1815644 BCW_3381 S. enterica Newport 50 4,692,732
MXTF00000000 SRR1815646 BCW_3391 S. enterica Typhimurium 156 5,129,165
MXTE00000000 SRR1122501 BCW_3397 S. enterica Typhimurium 147 5,007,181
MXTC00000000 SRR1815647 BCW_3399 S. enterica Typhimurium 111 4,589,713
MXTB00000000 SRR1815648 BCW_3400 S. enterica Typhimurium 115 4,976,612
MXTA00000000 SRR1122500 BCW_3401 S. enterica Typhimurium 100 5,006,021
MXSY00000000 SRR1815649 BCW_3403 S. enterica Heidelberg 74 4,878,111
MXSW00000000 SRR1122497 BCW_3407 S. enterica Heidelberg 54 4,774,229
MXSU00000000 SRR1122495 BCW_3410 S. enterica Heidelberg 101 4,918,683
MXSS00000000 SRR1122493 BCW_3413 S. enterica Dublin 91 4,941,315
MXSQ00000000 SRR1122491 BCW_3417 S. enterica Enteritidis 40 4,697,833
MXSP00000000 SRR1122490 BCW_3418 S. enterica Enteritidis 38 4,701,794
MXSO00000000 SRR1122489 BCW_3419 S. enterica Newport 117 5,237,192
MXSN00000000 SRR1106560 BCW_3423 S. enterica Javiana 30 4,679,164
MXSM00000000 SRR1122485 BCW_3424 S. enterica Javiana 60 4,753,314
MXSL00000000 SRR1815650 BCW_3425 S. enterica Javiana 78 4,597,103
MXSK00000000 SRR1840720 BCW_3429 S. enterica 73 4,639,209
MXSJ00000000 SRR1816009 BCW_3946 S. enterica Typhimurium LT2 89 4,894,986
MXSH00000000 SRR1106341 BCW_3954 S. enterica Anatum 171 4,980,508
MXSG00000000 SRR1840721 BCW_3955 S. enterica Anatum 49 4,666,007
MXSF00000000 SRR1816010 BCW_3956 S. enterica Javiana 48 4,629,677
MXSE00000000 SRR1106340 BCW_3957 S. enterica Javiana 54 4,550,601
MXSD00000000 SRR1816011 BCW_3958 S. enterica Javiana 63 4,543,778
MXSB00000000 SRR1106338 BCW_3960 S. enterica München 50 4,599,061
MXSA00000000 SRR1106337 BCW_3961 S. enterica München 122 5,584,917
MXRZ00000000 SRR1106336 BCW_3962 S. enterica München 185 5,325,280
MXRY00000000 SRR1106335 BCW_3963 S. enterica München 131 5,045,274
MXRX00000000 SRR1106334 BCW_3964 S. enterica Thompson 70 4,637,934
MXRW00000000 SRR1106333 BCW_3965 S. enterica Thompson 169 4,747,023
MXRV00000000 SRR1106332 BCW_3966 S. enterica Thompson 131 5,080,361
MXRU00000000 SRR1106331 BCW_3967 S. enterica Thompson 242 5,095,338
MXRT00000000 SRR1840722 BCW_3969 S. enterica Newport (isolate S10801) 96 4,970,386
MXRS00000000 SRR1106330 BCW_3970 S. enterica Anatum 77 4,659,715
MXRR00000000 SRR1106329 BCW_3971 S. enterica Oranienburg 41 4,587,977
MXRQ00000000 SRR1840723 BCW_3972 S. enterica Braenderup 67 4,661,629
MXRP00000000 SRR1106328 BCW_3973 S. enterica Javiana 41 4,545,311
MXRO00000000 SRR1106327 BCW_3974 S. enterica Infantis 96 4,603,059
MXRN00000000 SRR1816012 BCW_3975 S. enterica Braenderup 151 4,654,185
MXRM00000000 SRR1840724 BCW_3976 S. enterica Poona 72 4,589,727
MXRL00000000 SRR1106326 BCW_3977 S. enterica Oranienburg 64 4,773,105
MXRK00000000 SRR1840725 BCW_3978 S. enterica Javiana 44 4,679,302
MXRI00000000 SRR1106324 BCW_3980 S. enterica Berta 55 4,751,563
MXRH00000000 SRR1106323 BCW_3981 S. enterica München 86 4,813,057
MXRG00000000 SRR1106322 BCW_3982 S. enterica Montevideo 137 4,737,256
MXRF00000000 SRR1106321 BCW_3983 S. enterica Infantis 150 4,674,192
MXRE00000000 SRR1106320 BCW_3984 S. enterica Thompson 88 4,748,262
MXRC00000000 SRR1106318 BCW_3986 S. enterica Poona 57 4,607,905
MXRA00000000 SRR1106316 BCW_3988 S. enterica Javiana 110 4,600,804
MXQZ00000000 SRR1106315 BCW_3989 S. enterica Thompson 70 4,897,286
MXQY00000000 SRR1106314 BCW_3990 S. enterica Typhimurium 78 4,828,303
MXQX00000000 SRR1840726 BCW_3992 S. enterica München 49 4,733,057
MXQW00000000 SRR1816013 BCW_3993 S. enterica Braenderup 69 4,696,120
MXQV00000000 SRR1816014 BCW_3994 S. enterica Virchow 53 4,726,922
MXQU00000000 SRR1106312 BCW_3995 S. enterica Infantis 55 4,575,526
MXQS00000000 SRR1106310 BCW_3997 S. enterica Braenderup 147 4,627,535
MXQR00000000 SRR1816015 BCW_3998 S. enterica Hartford 65 4,858,064
MXQQ00000000 SRR1816016 BCW_3999 S. enterica Litchfield 53 4,626,170
MXQP00000000 SRR1106309 BCW_4000 S. enterica Litchfield 100 4,701,917
MXQN00000000 SRR1840727 BCW_4002 S. enterica Javiana 35 4,636,422
MXQM00000000 SRR1816018 BCW_4003 S. enterica Thompson 90 4,702,008
MXQL00000000 SRR1106308 BCW_4004 S. enterica Montevideo 211 4,726,450
MXQK00000000 SRR1106307 BCW_4005 S. enterica Anatum 97 4,695,326
MXQJ00000000 SRR1106306 BCW_4006 S. enterica Anatum 111 4,720,546
MYUA00000000 SRR1106303 BCW_4010 S. enterica Anatum 117 4,628,901
MYTZ00000000 SRR1106302 BCW_4011 S. enterica Berta 101 4,739,981
MYTY00000000 SRR1106301 BCW_4012 S. enterica Hartford 153 4,847,908
MYTX00000000 SRR1106300 BCW_4013 S. enterica Hartford 69 4,814,418
MYTW00000000 SRR1816019 BCW_4014 S. enterica Hartford 77 4,528,757
MYTV00000000 SRR1106299 BCW_4015 S. enterica Litchfield 172 4,777,346
MYTU00000000 SRR1106298 BCW_4016 S. enterica Hadar 150 4,703,226
MYTT00000000 SRR1106297 BCW_4017 S. enterica Paratyphi B 69 4,666,931
MYTR00000000 SRR1816050 BCW_4232 S. enterica Bovismorbificans 158 43 4,725,644
MYTQ00000000 SRR1816051 BCW_4233 S. enterica Choleraesuis X3264 56 4,762,068
MYTP00000000 SRR1816052 BCW_4234 S. enterica Typhimurium 1408 97 4,887,615
MYTO00000000 SRR1133236 BCW_4343 S. enterica Newport 144 5,176,001
MYTN00000000 SRR1133235 BCW_4344 S. enterica Newport 127 4,971,739
MYTM00000000 SRR1816134 BCW_4345 S. enterica Agona 71 5,133,792
MYTL00000000 SRR1133234 BCW_4346 S. enterica Typhimurium var. 5- 122 4,983,525
MYTI00000000 SRR1133233 BCW_4349 S. enterica Newport 205 5,112,722
MYTG00000000 SRR1133232 BCW_4351 S. enterica Cubana 240 5,196,151
MYTE00000000 SRR1840731 BCW_4353 S. enterica Newport 164 4,952,325
MYTC00000000 SRR1840733 BCW_4356 S. enterica Enteritidis 209 4,945,394
MYTA00000000 SRR1133230 BCW_4358 S. enterica Agona 89 5,032,952
MYSZ00000000 SRR1133229 BCW_4359 S. enterica Dublin 51 4,974,874
MYSW00000000 SRR1133228 BCW_4362 S. enterica Agona 126 5,021,755
MYST00000000 SRR1840738 BCW_4365 S. enterica Typhimurium 86 5,122,219
MYSS00000000 SRR1816138 BCW_4366 S. enterica Dublin 113 4,968,847
MYSQ00000000 SRR1840740 BCW_4368 S. enterica Newport 72 5,015,211
MYSP00000000 SRR1840741 BCW_4369 S. enterica Group C2 75 4,941,726
MYSO00000000 SRR1840742 BCW_4370 S. enterica Newport 109 5,049,424
MYSN00000000 SRR1840743 BCW_4371 S. enterica Newport 77 4,990,743
MYSM00000000 SRR1840744 BCW_4372 S. enterica Typhimurium 121 5,150,066
MYSL00000000 SRR1840745 BCW_4373 S. enterica Newport 107 4,906,835
MYSK00000000 SRR1840746 BCW_4374 S. enterica Newport 76 4,977,217
MYSJ00000000 SRR1840747 BCW_4375 S. enterica Agona 88 5,012,226
MYSI00000000 SRR1840748 BCW_4376 S. enterica Newport 92 4,975,843
MYSH00000000 SRR1840749 BCW_4377 S. enterica Agona 71 4,977,240
MYSG00000000 SRR1840750 BCW_4378 S. enterica Newport 88 4,958,605
MYSF00000000 SRR1840751 BCW_4379 S. enterica Typhimurium var. 5- 107 5,126,554
MYSE00000000 SRR1840752 BCW_4380 S. enterica Newport 73 4,838,297
MYSD00000000 SRR1816139 BCW_4381 S. enterica Typhimurium var. 5- 204 5,160,925
MYSC00000000 SRR1840753 BCW_4382 S. enterica Newport 96 4,972,209
MYSA00000000 SRR1816140 BCW_4384 S. enterica Heidelberg 89 5,106,196
MYRZ00000000 SRR1816141 BCW_4385 S. enterica Dublin 210 4,973,427
MYRU00000000 SRR1816146 BCW_4390 S. enterica Typhimurium 117 5,107,620
MYRS00000000 SRR1816148 BCW_4392 S. enterica Typhimurium 142 5,126,692
MYRR00000000 SRR1816323 BCW_4651 S. enterica 44 4,798,821
MYRQ00000000 SRR1816324 BCW_4652 S. enterica 42 4,698,671
MYRP00000000 SRR1816325 BCW_4653 S. enterica 50 4,864,564
MYRO00000000 SRR1816327 BCW_4656 S. enterica 47 4,731,136
MYRN00000000 SRR1816328 BCW_4657 S. enterica 27 4,696,026
MYRM00000000 SRR1816329 BCW_4658 S. enterica 26 4,695,002
MYRL00000000 SRR1816330 BCW_4659 S. enterica 90 4,819,372
MYRK00000000 SRR1816331 BCW_4660 S. enterica 37 4,731,302
MYRJ00000000 SRR1816332 BCW_4661 S. enterica 43 4,694,989
MYRI00000000 SRR1816333 BCW_4662 S. enterica 34 4,729,771
MYRH00000000 SRR1816334 BCW_4663 S. enterica 37 4,696,846
MYRG00000000 SRR1816335 BCW_4664 S. enterica 28 4,695,186
MYRF00000000 SRR1816336 BCW_4665 S. enterica 44 4,697,762
MYRE00000000 SRR1816337 BCW_4666 S. enterica 36 4,697,934
MYRD00000000 SRR1816338 BCW_4667 S. enterica 32 4,637,705
MYRC00000000 SRR1816339 BCW_4668 S. enterica 29 4,794,897
MYRB00000000 SRR1816340 BCW_4669 S. enterica 46 4,703,826
MYRA00000000 SRR1816341 BCW_4670 S. enterica 42 4,639,441
MYQZ00000000 SRR1816342 BCW_4671 S. enterica 27 4,694,414
MYQY00000000 SRR1816343 BCW_4672 S. enterica 46 4,729,916
MYQX00000000 SRR1816344 BCW_4673 S. enterica 40 4,696,024
MYQW00000000 SRR1816345 BCW_4674 S. enterica 40 4,695,278
MYQV00000000 SRR1816346 BCW_4675 S. enterica 34 4,692,292
MYQU00000000 SRR1816347 BCW_4676 S. enterica 28 4,695,197
MYQT00000000 SRR1816348 BCW_4677 S. enterica 37 4,695,750
MYQS00000000 SRR1816349 BCW_4678 S. enterica 41 4,696,374
MYQR00000000 SRR1816350 BCW_4679 S. enterica 33 4,696,528
MYQQ00000000 SRR1816351 BCW_4680 S. enterica 40 4,698,547
MYQP00000000 SRR1816352 BCW_4681 S. enterica 41 4,698,290
MYQO00000000 SRR1816353 BCW_4682 S. enterica 35 4,704,806
MYQN00000000 SRR1816354 BCW_4683 S. enterica 36 4,695,392
MYQM00000000 SRR1816355 BCW_4684 S. enterica 47 4,529,850
MYQL00000000 SRR1816446 BCW_4834 S. enterica 48:-:- 98 5,163,960
MYQK00000000 SRR1816447 BCW_4835 S. enterica Typhimurium 83 4,895,243
MYQJ00000000 SRR1816448 BCW_4836 S. enterica Typhimurium 76 4,769,472
MYQI00000000 SRR1816449 BCW_4837 S. enterica Brandenburg 61 4,446,364
MYQH00000000 SRR1816450 BCW_4838 S. enterica Brandenburg 83 4,622,960
MYQG00000000 SRR1816451 BCW_4839 S. enterica Typhimurium 85 4,770,466
MYQF00000000 SRR1816452 BCW_4840 S. enterica Typhimurium 75 4,801,660
MYQE00000000 SRR1816453 BCW_4842 S. enterica Brandenburg 52 4,629,291
MYQD00000000 SRR1816454 BCW_4843 S. enterica Typhimurium 77 4,805,016
MYQC00000000 SRR1816455 BCW_4844 S. enterica Typhimurium 82 4,803,735
MYQB00000000 SRR1816456 BCW_4845 S. enterica Typhimurium 75 4,803,017
MYQA00000000 SRR1816457 BCW_4846 S. enterica Typhimurium 94 4,894,766
MYPZ00000000 SRR1816458 BCW_4847 S. enterica Typhimurium 64 4,756,875
MYPY00000000 SRR1816459 BCW_4848 S. enterica Typhimurium 149 4,785,032
MYPX00000000 SRR1816460 BCW_4849 S. enterica Typhimurium 78 4,846,746
MYPW00000000 SRR1816461 BCW_4850 S. enterica Typhimurium 88 4,804,916
MYPV00000000 SRR1816462 BCW_4851 S. enterica Typhimurium 91 4,895,455
MYPU00000000 SRR1816463 BCW_4852 S. enterica Typhimurium 85 4,896,021
MYPT00000000 SRR1816464 BCW_4853 S. enterica Brandenburg 25 4,531,102
MYPS00000000 SRR1816465 BCW_4854 S. enterica Typhimurium 93 4,894,988
MYPR00000000 SRR1816466 BCW_4855 S. enterica Typhimurium 68 4,770,991
MYPQ00000000 SRR1816467 BCW_4856 S. enterica Typhimurium 95 4,845,262
MYPP00000000 SRR1816468 BCW_4857 S. enterica Typhimurium 76 4,804,573
MYPO00000000 SRR1816469 BCW_4858 S. enterica Typhimurium 60 4,799,354
MYPN00000000 SRR1816470 BCW_4859 S. enterica Typhimurium 67 4,874,871
MYPM00000000 SRR1816471 BCW_4860 S. enterica Typhimurium 62 4,768,147
MYPL00000000 SRR1816472 BCW_4861 S. enterica Typhimurium 80 4,893,155
MYPK00000000 SRR1816473 BCW_4862 S. enterica Brandenburg 35 4,535,313
MYPJ00000000 SRR1816474 BCW_4863 S. enterica Typhimurium 84 4,802,661
MYPI00000000 SRR1816475 BCW_4864 S. enterica Brandenburg 49 4,634,922
MYPH00000000 SRR1816476 BCW_4865 S. enterica Brandenburg 46 4,646,741
MYPG00000000 SRR1816477 BCW_4866 S. enterica Brandenburg 45 4,533,503
MYPF00000000 SRR1816495 BCW_4887 S. enterica 38 4,704,384
MYPE00000000 SRR1816496 BCW_4888 S. enterica 66 4,644,940
MYPD00000000 SRR1816497 BCW_4889 S. enterica 53 4,614,009
MYPC00000000 SRR1816498 BCW_4890 S. enterica 70 4,768,956
MYPB00000000 SRR1816499 BCW_4891 S. enterica 82 4,685,261
MYPA00000000 SRR1816500 BCW_4892 S. enterica 40 4,656,781
MYOZ00000000 SRR1816501 BCW_4893 S. enterica 80 4,697,252
MYOY00000000 SRR1816502 BCW_4894 S. enterica 35 4,663,805
MYOX00000000 SRR1816503 BCW_4895 S. enterica 80 4,766,604
MYOW00000000 SRR1816504 BCW_4896 S. enterica 61 4,702,091
MYOV00000000 SRR1816505 BCW_4897 S. enterica 64 4,510,094
MYOU00000000 SRR1816506 BCW_4898 S. enterica 39 4,854,041
MYOT00000000 SRR1816507 BCW_4899 S. enterica 75 4,929,027
MYOS00000000 SRR1816508 BCW_4900 S. enterica 52 4,788,114
MYOR00000000 SRR1816509 BCW_4901 S. enterica 48 4,638,809
MYOQ00000000 SRR1816510 BCW_4902 S. enterica 98 4,845,443
MYOP00000000 SRR1816511 BCW_4903 S. enterica 39 4,665,184
MYOO00000000 SRR1816512 BCW_4904 S. enterica 72 4,861,097
MYON00000000 SRR1816513 BCW_4905 S. enterica 57 4,826,391
MYOM00000000 SRR1816514 BCW_4906 S. enterica 61 4,709,512
MYOL00000000 SRR1816515 BCW_4907 S. enterica 81 4,748,268
MYOK00000000 SRR1816516 BCW_4908 S. enterica 53 4,617,710
MYOJ00000000 SRR1816518 BCW_4910 S. enterica 65 4,699,642
MYOI00000000 SRR1816519 BCW_4911 S. enterica 95 4,888,754
MYOH00000000 SRR1816520 BCW_4912 S. enterica 77 4,677,955
MYOG00000000 SRR1816521 BCW_4913 S. enterica 83 4,830,988
MYOF00000000 SRR1816522 BCW_4914 S. enterica 64 4,830,410
MYOE00000000 SRR1816523 BCW_4915 S. enterica 42 4,653,833
MYOD00000000 SRR1816524 BCW_4916 S. enterica 183 4,760,274
MYOC00000000 SRR1816525 BCW_4917 S. enterica 37 4,752,300
MYOB00000000 SRR1816526 BCW_4918 S. enterica 72 4,802,006
MYOA00000000 SRR1816527 BCW_4919 S. enterica 28 4,696,876
MYNZ00000000 SRR1816528 BCW_4920 S. enterica 78 4,904,746
MYNY00000000 SRR1816529 BCW_4921 S. enterica 61 4,690,844
MYNX00000000 SRR1816530 BCW_4922 S. enterica 67 4,927,613
MYNW00000000 SRR1816531 BCW_4923 S. enterica 71 4,904,606
MYNV00000000 SRR1816532 BCW_4924 S. enterica 69 4,904,147
MYNU00000000 SRR1816533 BCW_4925 S. enterica 78 4,688,736
MYNT00000000 SRR1816534 BCW_4926 S. enterica 64 4,669,011
MYNS00000000 SRR1816535 BCW_4927 S. enterica 51 4,787,809
MYNR00000000 SRR1816536 BCW_4928 S. enterica 98 4,843,888
MYNQ00000000 SRR1816537 BCW_4929 S. enterica 52 4,620,424
MYNP00000000 SRR1816538 BCW_4930 S. enterica 65 4,757,293
MYNO00000000 SRR1816539 BCW_4931 S. enterica 79 4,807,107
MYNN00000000 SRR1816541 BCW_4933 S. enterica 74 4,629,919
MYNM00000000 SRR1816542 BCW_4934 S. enterica 57 4,670,434
MYNL00000000 SRR1816543 BCW_4935 S. enterica 33 4,667,921
MYNK00000000 SRR1816544 BCW_4936 S. enterica 88 4,873,401
MYNJ00000000 SRR1816545 BCW_4937 S. enterica 35 4,708,860
MYNI00000000 SRR1816546 BCW_4938 S. enterica 31 4,705,215
MYNH00000000 SRR1816547 BCW_4939 S. enterica 65 4,715,137
MYNG00000000 SRR1816548 BCW_4940 S. enterica 67 4,606,750
MYNF00000000 SRR1816549 BCW_4941 S. enterica 71 4,752,673
MYNC00000000 SRR1816552 BCW_4944 S. enterica 76 4,656,228
MYMO00000000 SRR1816566 BCW_4958 S. enterica 54 4,953,576
MYMH00000000 SRR1816573 BCW_4986 S. enterica 243 4,769,308
MYME00000000 SRR1816576 BCW_4989 S. enterica 298 5,142,517
MYMB00000000 SRR1816582 BCW_5009 S. enterica 106 4,562,891
MYLZ00000000 SRR1816584 BCW_5011 S. enterica 102 4,946,220
MYLX00000000 SRR1816588 BCW_5037 S. enterica 81 4,772,512
MYLW00000000 SRR1816589 BCW_5038 S. enterica 53 4,670,024
MYLV00000000 SRR1816590 BCW_5039 S. enterica 193 4,835,257
MYLT00000000 SRR1816592 BCW_5041 S. enterica 177 4,886,915
MYLR00000000 SRR1816597 BCW_5047 S. enterica 254 4,871,718
MYLQ00000000 SRR1816598 BCW_5048 S. enterica 128 4,679,123
MYLO00000000 SRR1816600 BCW_5050 S. enterica 42 4,505,872
MYKN00000000 SRR1816632 BCW_5105 S. enterica 75 4,838,827
MYKM00000000 SRR1816633 BCW_5106 S. enterica 73 5,072,429
MYKL00000000 SRR1816634 BCW_5107 S. enterica 37 4,486,278
MYKK00000000 SRR1816635 BCW_5108 S. enterica 33 4,506,576
MYKJ00000000 SRR1816636 BCW_5109 S. enterica 77 4,791,805
MYKI00000000 SRR1816637 BCW_5110 S. enterica 41 4,918,738
MYKC00000000 SRR1816672 BCW_5227 S. enterica Schwarzengrund 230 4,543,616
MYJU00000000 SRR1816680 BCW_5262 S. enterica 109 4,887,637
MYJN00000000 SRR1814858 BCW_5827 S. enterica 4,12:i:- 54 4,546,998
MYJM00000000 SRR1814859 BCW_5828 S. enterica Typhimurium 77 4,806,285
MYJK00000000 SRR1814861 BCW_5830 S. enterica 1,4,12:-:1,2 82 4,763,992
MYJI00000000 SRR1814863 BCW_5832 S. enterica Typhimurium 72 4,862,012
MYJH00000000 SRR1814864 BCW_5833 S. enterica Typhimurium 161 4,939,658
MYJG00000000 SRR1814865 BCW_5834 S. enterica Typhimurium 86 4,865,069
MYJF00000000 SRR1814866 BCW_5835 S. enterica Typhimurium 153 4,859,254
MYJD00000000 SRR1814868 BCW_5837 S. enterica 4,12:i:- 161 5,153,574
MYJC00000000 SRR1814869 BCW_5838 S. enterica 4,[5],12:i:- 115 5,028,359
MYJB00000000 SRR1814870 BCW_5839 S. enterica 4,12:i:- 126 4,950,031
MYJA00000000 SRR1814871 BCW_5840 S. enterica 4,[5],12:i:- 130 4,920,671
MYIZ00000000 SRR1814872 BCW_5841 S. enterica 4,[5],12:i:- 132 5,201,459
MYIX00000000 SRR1814874 BCW_5843 S. enterica 4,12:i:- 96 4,917,937
MYIW00000000 SRR1814875 BCW_5844 S. enterica 4,[5],12:i:- 79 4,827,920
MYIV00000000 SRR1814876 BCW_5845 S. enterica Typhimurium 88 4,896,433
MYIT00000000 SRR1814878 BCW_5847 S. enterica 4,[5],12:i:- 128 4,858,094
MYIS00000000 SRR1814879 BCW_5848 S. enterica Typhimurium 124 4,907,805
MYIP00000000 SRR1814882 BCW_5851 S. enterica 4,12:i:- 99 4,900,685
MYIN00000000 SRR1814884 BCW_5853 S. enterica Enteritidis 55 4,736,047
MYIM00000000 SRR1814885 BCW_5854 S. enterica Enteritidis 60 4,707,849
MYIL00000000 SRR1814886 BCW_5855 S. enterica 4,[5],12:i:- 153 4,869,475
MYIJ00000000 SRR1814888 BCW_5857 S. enterica 4,[5],12:i:- 144 4,960,392
MYIH00000000 SRR1814890 BCW_5859 S. enterica Typhimurium 111 5,155,971
MYIE00000000 SRR1814894 BCW_5863 S. enterica 4,12:i:- 147 5,036,041
MYIA00000000 SRR1814899 BCW_5868 S. enterica Typhimurium 78 4,987,666
MYHZ00000000 SRR1814900 BCW_5870 S. enterica Typhimurium 132 4,932,046
MYHY00000000 SRR1814901 BCW_5871 S. enterica Typhimurium 102 4,881,675
MYHW00000000 SRR1814904 BCW_5874 S. enterica Typhimurium 117 4,998,131
MYHV00000000 SRR1814905 BCW_5875 S. enterica Typhimurium 211 4,843,570
MYHU00000000 SRR1814906 BCW_5876 S. enterica Typhimurium 195 4,960,978
MYHT00000000 SRR1814907 BCW_5877 S. enterica Typhimurium 115 4,972,933
MYHR00000000 SRR1814909 BCW_5879 S. enterica Typhimurium 183 5,005,747
MYHQ00000000 SRR1814910 BCW_5880 S. enterica Typhimurium 119 5,029,247
MYHP00000000 SRR1814911 BCW_5881 S. enterica Typhimurium 109 4,973,403
MYHO00000000 SRR1814912 BCW_5882 S. enterica Typhimurium 94 4,789,503
MYHN00000000 SRR1814913 BCW_5883 S. enterica Typhimurium 85 4,948,763
MYHM00000000 SRR1814914 BCW_5884 S. enterica Typhimurium 119 4,950,319
MYHI00000000 SRR1814918 BCW_5888 S. enterica Typhimurium 111 4,969,814
MYHH00000000 SRR1814919 BCW_5889 S. enterica Typhimurium 116 4,907,806
MYHG00000000 SRR1814920 BCW_5890 S. enterica Typhimurium 112 4,939,849
MYHF00000000 SRR1814921 BCW_5891 S. enterica Typhimurium 123 4,932,739
MYHE00000000 SRR1814922 BCW_5892 S. enterica Typhimurium 90 4,870,931
MYHD00000000 SRR1814923 BCW_5893 S. enterica Typhimurium 211 4,971,346
MYHB00000000 SRR1814925 BCW_5895 S. enterica Typhimurium 135 4,933,960
MYGZ00000000 SRR1814927 BCW_5897 S. enterica Enteritidis 202 4,757,626
MYGY00000000 SRR1814928 BCW_5898 S. enterica Typhimurium 129 4,916,058
MYGX00000000 SRR1814929 BCW_5899 S. enterica Typhimurium 111 4,991,400
MYGW00000000 SRR1814930 BCW_5900 S. enterica Typhimurium 109 4,946,012
MYGV00000000 SRR1814931 BCW_5901 S. enterica Typhimurium 70 4,985,024
MYGU00000000 SRR1814932 BCW_5902 S. enterica Typhimurium 92 4,890,667
MYGT00000000 SRR1814933 BCW_5903 S. enterica Indiana 81 4,695,154
MYGS00000000 SRR1814934 BCW_5904 S. enterica Indiana 79 4,693,070
MYGR00000000 SRR1814935 BCW_5905 S. enterica Montevideo 89 4,651,553
MYGQ00000000 SRR1814936 BCW_5906 S. enterica Enteritidis 50 4,703,102
MYGP00000000 SRR1814937 BCW_5907 S. enterica Indiana 214 5,000,185
MYGO00000000 SRR1814938 BCW_5908 S. enterica Montevideo 135 4,735,317
MYGN00000000 SRR1814940 BCW_5910 S. enterica Montevideo 45 4,705,549
MYGM00000000 SRR1814941 BCW_5911 S. enterica Derby 99 4,706,266
MYGL00000000 SRR1753633 BCW_5935 S. enterica Bovismorbificans 70 4,732,903
MYGJ00000000 SRR1753634 BCW_5937 S. enterica Weltevreden 174 5,040,992
MYGI00000000 SRR1753635 BCW_5938 S. enterica Muenster 55 4,629,211
MYGG00000000 SRR1753637 BCW_5940 S. enterica Kentucky 158 5,150,542
MYGF00000000 SRR1753638 BCW_5941 S. enterica Miami 90 4,834,722
MYGE00000000 SRR1753639 BCW_5942 S. enterica Muenster 81 4,854,793
MYGD00000000 SRR1753640 BCW_5947 S. enterica Miami 195 4,580,816
MYGB00000000 SRR1753641 BCW_5949 S. enterica Kentucky 82 4,717,419
MYGA00000000 SRR1753642 BCW_5950 S. enterica Weltevreden 161 5,208,346
MYFZ00000000 SRR1753643 BCW_5951 S. enterica Gaminara 52 4,538,913
MYFY00000000 SRR1753644 BCW_5952 S. enterica Bovismorbificans 58 4,605,133
MYFX00000000 SRR1753645 BCW_5953 S. enterica Muenster 47 4,718,036
MYFW00000000 SRR1753646 BCW_5954 S. enterica Miami 75 4,616,722
MYFU00000000 SRR1753648 BCW_5956 S. enterica Muenster 37 4,593,200
MYFT00000000 SRR1753649 BCW_5957 S. enterica Miami 54 4,580,606
MYFS00000000 SRR1753650 BCW_5958 S. enterica Kentucky 71 4,722,160
MYFR00000000 SRR1753651 BCW_5959 S. enterica Weltevreden 111 4,968,419
MZGF00000000 SRR1753652 BCW_5960 S. enterica Gaminara 48 4,541,461
MZGD00000000 SRR1753654 BCW_5962 S. enterica Gaminara 92 5,093,951
MZGC00000000 SRR1753655 BCW_5964 S. enterica Miami 71 4,581,425
MZGB00000000 SRR1753656 BCW_5966 S. enterica Virchow 54 4,491,231
MZGA00000000 SRR1753657 BCW_5967 S. enterica Kentucky 58 4,776,051
MZFZ00000000 SRR1753658 BCW_5968 S. enterica Gaminara 49 4,561,851
MZFY00000000 SRR1753660 BCW_5971 S. enterica Bovismorbificans 37 4,688,243
MZFX00000000 SRR1753661 BCW_5973 S. enterica Weltevreden 111 5,016,671
MZFW00000000 SRR1753662 BCW_5974 S. enterica Virchow 52 4,680,614
MZFV00000000 SRR1753663 BCW_5975 S. enterica Blockley 249 5,575,838
MZFU00000000 SRR1753664 BCW_5976 S. enterica Adelaide 29 4,560,267
MZFT00000000 SRR1753665 BCW_5977 S. enterica Ohio 26 4,850,583
MZFS00000000 SRR1753666 BCW_5978 S. enterica Pomona 62 4,451,058
MZFR00000000 SRR1753667 BCW_5979 S. enterica Adelaide 51 4,493,063
MZFQ00000000 SRR1814990 BCW_5980 S. enterica Dublin 32 4,675,704
MZFP00000000 SRR1753668 BCW_5981 S. enterica Ohio 73 4,827,114
MZFO00000000 SRR1753669 BCW_5982 S. enterica Pomona 42 4,451,338
MZFM00000000 SRR1753671 BCW_5984 S. enterica Reading 79 4,832,466
MZFL00000000 SRR1753672 BCW_5985 S. enterica Adelaide 37 4,690,913
MZFK00000000 SRR1753673 BCW_5986 S. enterica Reading 90 4,542,190
MZFJ00000000 SRR1753674 BCW_5987 S. enterica Ohio 69 4,689,964
MZFI00000000 SRR1814998 BCW_5988 S. enterica Pomona 60 4,755,333
MZFH00000000 SRR1814999 BCW_5989 S. enterica Blockley 40 4,448,104
MZFF00000000 SRR1753675 BCW_5991 S. enterica Pomona 37 4,412,782
MZFE00000000 SRR1753676 BCW_5992 S. enterica Ohio 63 4,696,650
MZFD00000000 SRR1753677 BCW_5993 S. enterica Adelaide 50 4,495,470
MZFC00000000 SRR1753678 BCW_5994 S. enterica Blockley 45 4,869,614
MZFB00000000 SRR1753679 BCW_5997 S. enterica Pomona 50 4,728,423
MZFA00000000 SRR1753680 BCW_5998 S. enterica Manhattan 60 4,643,018
MZEZ00000000 SRR1753681 BCW_5999 S. enterica Blockley 45 4,729,445
MZEX00000000 SRR1753682 BCW_6001 S. enterica Minnesota 38 4,585,895
MZEW00000000 SRR1753683 BCW_6002 S. enterica Inverness 43 4,998,352
MZEV00000000 SRR1753684 BCW_6003 S. enterica Kiambu 48 4,483,229
MZEU00000000 SRR1753685 BCW_6004 S. enterica Uganda 49 4,694,602
MZET00000000 SRR1753686 BCW_6005 S. enterica Urbana 158 4,993,666
MZES00000000 SRR1753687 BCW_6006 S. enterica Hvittingfoss 38 4,666,586
MZER00000000 SRR1815015 BCW_6007 S. enterica Hvittingfoss 43 4,867,072
MZEQ00000000 SRR1753688 BCW_6008 S. enterica Minnesota 57 4,595,541
MZEP00000000 SRR1753689 BCW_6009 S. enterica I 4,5,12:b:- 157 4,797,117
MZEO00000000 SRR1753690 BCW_6010 S. enterica Inverness 52 4,807,994
MZEN00000000 SRR1753691 BCW_6011 S. enterica Kiambu 34 4,480,561
MZEM00000000 SRR1753692 BCW_6012 S. enterica Uganda 80 4,803,514
MZEK00000000 SRR1753694 BCW_6014 S. enterica Minnesota 65 4,712,253
MZEI00000000 SRR1753695 BCW_6016 S. enterica Urbana 118 5,018,992
MZEH00000000 SRR1753696 BCW_6017 S. enterica I 4,5,12:b:- 75 4,736,751
MZEG00000000 SRR1753697 BCW_6018 S. enterica Hvittingfoss 44 4,714,829
MZEF00000000 SRR1753698 BCW_6019 S. enterica Inverness 68 5,050,709
MZEE00000000 SRR1753699 BCW_6020 S. enterica Urbana 120 4,957,372
MZED00000000 SRR1815029 BCW_6021 S. enterica Kiambu 58 4,639,045
MZEC00000000 SRR1753700 BCW_6022 S. enterica Hvittingfoss 108 4,673,668
MZEB00000000 SRR1753701 BCW_6023 S. enterica Uganda 62 4,784,075
MZEA00000000 SRR1753702 BCW_6024 S. enterica I 4,12:b:- 32 4,808,859
MZDY00000000 SRR1753704 BCW_6026 S. enterica Kiambu 150 4,509,398
MZDX00000000 SRR1753705 BCW_6027 S. enterica Inverness 157 4,964,713
MZDW00000000 SRR1753707 BCW_6030 S. enterica Uganda 147 4,668,843
MZDV00000000 SRR1753708 BCW_6031 S. enterica Minnesota 179 4,633,156
MZDT00000000 SRR1753710 BCW_6034 S. enterica Hvittingfoss 58 4,695,779
MZDS00000000 SRR1753711 BCW_6035 S. enterica Urbana 39 4,726,844
MZDR00000000 SRR1753712 BCW_6036 S. enterica Minnesota 83 4,591,733
MZDQ00000000 SRR1753713 BCW_6037 S. enterica Havana 70 4,859,290
MZDO00000000 SRR1753715 BCW_6039 S. enterica Telelkebir 68 4,660,002
MZDN00000000 SRR1753716 BCW_6040 S. enterica IV 44:z4,z23:- 97 4,597,275
MZDM00000000 SRR1753717 BCW_6041 S. enterica Bredeney 57 4,737,947
MZDL00000000 SRR1753718 BCW_6042 S. enterica Cerro 74 4,676,865
MZDK00000000 SRR1753719 BCW_6043 S. enterica Telelkebir 75 4,767,998
MZDJ00000000 SRR1753720 BCW_6044 S. enterica Bredeney 53 4,649,459
MZDI00000000 SRR1753721 BCW_6045 S. enterica London 77 4,973,779
MZDH00000000 SRR1753722 BCW_6046 S. enterica Telelkebir 63 4,568,808
MZDG00000000 SRR1753723 BCW_6047 S. enterica Havana 65 4,805,815
MZDF00000000 SRR1753724 BCW_6049 S. enterica Cerro 83 4641746
MZDE00000000 SRR1753725 BCW_6050 S. enterica Bredeney 45 4,588,214
MZDD00000000 SRR1753726 BCW_6051 S. enterica Johannesburg 82 4,677,641
MZDC00000000 SRR1753727 BCW_6052 S. enterica Telelkebir 64 4,607,374
MZDB00000000 SRR1753728 BCW_6053 S. enterica Johannesburg 98 4,826,945
MZDA00000000 SRR1753729 BCW_6054 S. enterica Bredeney 53 4,821,832
MZCZ00000000 SRR1753730 BCW_6055 S. enterica Havana 70 4,943,752
MZCY00000000 SRR1753731 BCW_6056 S. enterica Newport 221 5,063,691
MZCX00000000 SRR1753732 BCW_6057 S. enterica Bredeney 53 4,674,653
MZCW00000000 SRR1753733 BCW_6058 S. enterica Bredeney 35 4,634,860
MZCV00000000 SRR1753734 BCW_6059 S. enterica Telelkebir 68 4,613,740
MZCU00000000 SRR1753735 BCW_6060 S. enterica Telelkebir 132 5,032,061
MZCT00000000 SRR1815066 BCW_6061 S. enterica Cerro 53 4,615,726
MZCS00000000 SRR1815067 BCW_6062 S. enterica Johannesburg 75 4,799,209
MZCR00000000 SRR1753736 BCW_6063 S. enterica Johannesburg 42 4,567,118
MZCQ00000000 SRR1753737 BCW_6064 S. enterica Cerro 71 4,548,490
MZCP00000000 SRR1753738 BCW_6065 S. enterica London 95 4,749,277
MZCO00000000 SRR1753740 BCW_6067 S. enterica Havana 214 4,652,566
MZCL00000000 SRR1753743 BCW_6070 S. enterica Grumpensis 60 4,533,267
MZCK00000000 SRR1753744 BCW_6071 S. enterica Albany 123 4,770,257
MZCJ00000000 SRR1753745 BCW_6072 S. enterica Worthington 75 5,088,834
MZCI00000000 SRR1753746 BCW_6073 S. enterica Chester 54 4,752,112
MZCH00000000 SRR1753747 BCW_6074 S. enterica Albany 51 4,810,861
MZCG00000000 SRR1753748 BCW_6075 S. enterica Oslo 230 4,551,393
MZCF00000000 SRR1753749 BCW_6076 S. enterica Indiana 125 4,821,947
MZCE00000000 SRR1753750 BCW_6077 S. enterica Grumpensis 195 4,595,797
MZCD00000000 SRR1753751 BCW_6078 S. enterica Chester 64 4,740,601
MZBZ00000000 SRR1815087 BCW_6082 S. enterica Agbeni 51 4,785,183
MZBW00000000 SRR1753757 BCW_6085 S. enterica Worthington 53 4,775,647
MZBV00000000 SRR1753759 BCW_6087 S. enterica Chester 46 4,652,040
MZBU00000000 SRR1753760 BCW_6088 S. enterica Oslo 60 4,924,504
MZBT00000000 SRR1815094 BCW_6089 S. enterica Agbeni 66 4,833,217
MZBS00000000 SRR1753761 BCW_6090 S. enterica Oslo 43 4,546,183
MZBR00000000 SRR1753762 BCW_6091 S. enterica Indiana 234 4,760,739
MZBQ00000000 SRR1753763 BCW_6092 S. enterica Agbeni 66 4,676,150
MZBP00000000 SRR1753764 BCW_6093 S. enterica Chester 124 4,641,115
MZBO00000000 SRR1753765 BCW_6094 S. enterica Worthington 70 4,865,820
MZBN00000000 SRR1753766 BCW_6095 S. enterica Chester 60 4,866,135
MZBM00000000 SRR1753767 BCW_6096 S. enterica Indiana 77 4,898,026
MZBL00000000 SRR1753768 BCW_6097 S. enterica Indiana 74 4,739,393
MZBJ00000000 SRR1753772 BCW_6101 S. enterica Grumpensis 102 4,549,752
MZBI00000000 SRR1753773 BCW_6102 S. enterica Grumpensis 88 4,601,152
MZBH00000000 SRR1753774 BCW_6103 S. enterica Worthington 66 4,914,760
MZBG00000000 SRR1753775 BCW_6104 S. enterica Albany 41 4,727,611
MZBF00000000 SRR1753776 BCW_6105 S. enterica Albany 62 4,799,691
MZBE00000000 SRR1753777 BCW_6106 S. enterica Agbeni 66 4,591,561
MZBD00000000 SRR1753778 BCW_6107 S. enterica Loma Linda 87 4,584,522
MZBC00000000 SRR1753779 BCW_6108 S. enterica Ealing 75 4,798,099
MZBB00000000 SRR1753780 BCW_6109 S. enterica IV 48:g,z51:- 72 4,759,948
MZBA00000000 SRR1753781 BCW_6110 S. enterica Cubana 105 4,971,518
MZAZ00000000 SRR1753782 BCW_6111 S. enterica Edinburg 74 4,545,932
MZAY00000000 SRR1753783 BCW_6112 S. enterica Eastbourne 47 4,662,422
MZAX00000000 SRR1753784 BCW_6113 S. enterica Alachua 32 4,817,049
MZAW00000000 SRR1753785 BCW_6114 S. enterica Baildon 61 4,687,449
MZAU00000000 SRR1753788 BCW_6117 S. enterica Loma Linda 102 4,581,157
MZAT00000000 SRR1753789 BCW_6118 S. enterica Alachua 56 4,844,382
MZAS00000000 SRR1753790 BCW_6119 S. enterica Baildon 59 4,634,502
MZAR00000000 SRR1815125 BCW_6120 S. enterica Eastbourne 252 5,197,359
MZAQ00000000 SRR1753791 BCW_6121 S. enterica IV 50:z4,z23:- 115 5,024,314
MZAP00000000 SRR1753792 BCW_6122 S. enterica Edinburg 80 4,722,319
MZAO00000000 SRR1753793 BCW_6123 S. enterica IV 48:g,z51:- 88 4,660,603
MZAN00000000 SRR1753794 BCW_6124 S. enterica IV 50:z4,z23:- 93 4,930,341
MZAL00000000 SRR1753796 BCW_6126 S. enterica Baildon 70 4,838,330
MZAK00000000 SRR1753797 BCW_6127 S. enterica IV 48:g,z51:- 105 4,622,285
MZAJ00000000 SRR1815133 BCW_6128 S. enterica Alachua 48 4,515,165
MZAI00000000 SRR1753798 BCW_6129 S. enterica Cubana 57 4,889,759
MZAH00000000 SRR1753799 BCW_6130 S. enterica Loma Linda 91 4,618,678
MZAF00000000 SRR1753801 BCW_6133 S. enterica Loma Linda 188 4,574,002
MZAE00000000 SRR1753802 BCW_6134 S. enterica Cubana 93 4,900,616
MZAD00000000 SRR1753803 BCW_6135 S. enterica Eastbourne 55 4,666,773
MZAC00000000 SRR1753804 BCW_6136 S. enterica Baildon 93 4,862,028
MZAA00000000 SRR1753805 BCW_6139 S. enterica Alachua 64 4,862,440
MYZZ00000000 SRR1753806 BCW_6140 S. enterica Edinburg 78 4,522,056
MYZY00000000 SRR1753807 BCW_6141 S. enterica IV 48:g,z51:- 92 4,581,026
MYZW00000000 SRR1753809 BCW_6143 S. enterica Loma Linda 89 4,576,396
MYZV00000000 SRR1753810 BCW_6144 S. enterica Eastbourne 90 4,371,556
MYZU00000000 SRR1753811 BCW_6145 S. enterica Alachua 75 4,924,790
MYZT00000000 SRR1753812 BCW_6146 S. enterica Loma Linda 85 4,579,090
MYZS00000000 SRR1753813 BCW_6147 S. enterica Eastbourne 52 4,770,658
MYZR00000000 SRR1753814 BCW_6148 S. enterica Blockley 59 4,833,575
MYZQ00000000 SRR1753815 BCW_6149 S. enterica IV 50:z4,z23:- 130 4,598,225
MYZP00000000 SRR1753816 BCW_6151 S. enterica Cubana 86 4,900,289
MYZO00000000 SRR1753817 BCW_6152 S. enterica IV 50:z4,z23:- 88 4,572,619
MYZN00000000 SRR1753818 BCW_6153 S. enterica Ealing 42 4,725,736
MYZL00000000 SRR1753820 BCW_6155 S. enterica Cubana 68 4,874,989
MYZK00000000 SRR1753821 BCW_6156 S. enterica Blockley 46 4,703,470
MYZJ00000000 SRR1753822 BCW_6157 S. enterica Baildon 54 4,632,376
MYZI00000000 SRR1753823 BCW_6158 S. enterica Baildon 75 4,671,812
MYZG00000000 SRR1753824 BCW_6160 S. enterica Meleagridis 49 4,765,153
MYZF00000000 SRR1753825 BCW_6161 S. enterica I 9,12:l,z28:- 29 4,664,275
MYZE00000000 SRR1753826 BCW_6162 S. enterica IV 50:g,z51:- 146 4,789,405
MYZD00000000 SRR1753827 BCW_6163 S. enterica Choleraesuis var. Kunzendorf 72 4,737,676
MYZC00000000 SRR1753828 BCW_6164 S. enterica Kintambo 97 4,860,358
MYZB00000000 SRR1753829 BCW_6165 S. enterica IV 44:z4,z23:- 67 4,590,893
MYZA00000000 SRR1753830 BCW_6166 S. enterica Kottbus 54 4,662,259
MYYZ00000000 SRR1815170 BCW_6167 S. enterica I 9,12:l,z28:- 70 4,488,294
MYYY00000000 SRR1753831 BCW_6168 S. enterica Ibadan 34 4,522,045
MYYX00000000 SRR1753832 BCW_6169 S. enterica Meleagridis 45 4,795,066
MYYW00000000 SRR1753833 BCW_6170 S. enterica Monschaui 49 4,892,392
MYYV00000000 SRR1753834 BCW_6171 S. enterica IV 44:z4,z23:- 44 4,605,738
MYYU00000000 SRR1753835 BCW_6172 S. enterica Kintambo 106 4,972,684
MYYT00000000 SRR1753836 BCW_6173 S. enterica Choleraesuis var. Kunzendorf 92 4,737,938
MYYS00000000 SRR1753837 BCW_6174 S. enterica Corvallis 60 4,804,015
MYYR00000000 SRR1753838 BCW_6175 S. enterica IV 50:g,z51:- 130 4,841,611
MYYQ00000000 SRR1753839 BCW_6176 S. enterica Rissen 66 4,832,259
MYYP00000000 SRR1753840 BCW_6177 S. enterica Kottbus 56 4,736,546
MYYO00000000 SRR1753841 BCW_6178 S. enterica Corvallis 45 4,625,804
MYYN00000000 SRR1753842 BCW_6179 S. enterica Monschaui 53 4,809,938
MYYM00000000 SRR1753843 BCW_6180 S. enterica IV 50:g,z51:- 93 4,676,163
MYYL00000000 SRR1753844 BCW_6181 S. enterica IV 44:z4,z23:- 85 4,559,520
MYYK00000000 SRR1753845 BCW_6182 S. enterica Meleagridis 44 4,795,704
MYYJ00000000 SRR1815186 BCW_6183 S. enterica Kintambo 198 4,834,694
MYYI00000000 SRR1753848 BCW_6186 S. enterica I 9,12:l,z28:- 53 4,563,716
MYYH00000000 SRR1753849 BCW_6187 S. enterica Rissen 87 4,945,922
MYYG00000000 SRR1753850 BCW_6188 S. enterica Kintambo 81 4,807,235
MYYF00000000 SRR1753851 BCW_6189 S. enterica Kottbus 38 4,756,012
MYYE00000000 SRR1753852 BCW_6191 S. enterica Meleagridis 61 4,829,317
MYYD00000000 SRR1753853 BCW_6192 S. enterica IV 44:z4,z23:- 90 4,613,029
MYYC00000000 SRR1753854 BCW_6193 S. enterica Choleraesuis 87 4,741,704
MYYB00000000 SRR1753855 BCW_6194 S. enterica Choleraesuis var. Kunzendorf 91 4,822,344
MYYA00000000 SRR1753856 BCW_6195 S. enterica Monschaui 197 5,061,534
MYXZ00000000 SRR1753857 BCW_6196 S. enterica Meleagridis 42 4,719,812
MYXX00000000 SRR1753859 BCW_6200 S. enterica IV 50:g,z51:- 115 4,761,962
MYXW00000000 SRR1753860 BCW_6201 S. enterica Monschaui 64 4,740,104
MYXU00000000 SRR1815213 BCW_6222 S. enterica Derby 96 4,897,224
MYXT00000000 SRR1815214 BCW_6223 S. enterica Derby 128 4,896,999
MYXS00000000 SRR1815215 BCW_6224 S. enterica München 214 5,272,810
MYXR00000000 SRR1815216 BCW_6225 S. enterica München 84 5,265,120
MYXQ00000000 SRR1815217 BCW_6226 S. enterica München 92 5,256,870
MYXP00000000 SRR1815218 BCW_6227 S. enterica Derby 150 4,921,818
MYXN00000000 SRR1815220 BCW_6229 S. enterica München 84 5,136,972
MYXM00000000 SRR1815223 BCW_6232 S. enterica München 71 5,137,398
MYXL00000000 SRR1815224 BCW_6233 S. enterica München 137 5,147,066
MYXK00000000 SRR1815225 BCW_6234 S. enterica München 75 5,137,903
MYXJ00000000 SRR1815226 BCW_6235 S. enterica München 42 4,528,277
MYXI00000000 SRR1815227 BCW_6236 S. enterica Senftenberg 95 4,779,616
MYXH00000000 SRR1815228 BCW_6237 S. enterica Senftenberg 111 4,784,679
MYXG00000000 SRR1815229 BCW_6238 S. enterica Senftenberg 70 4,815,347
MYXD00000000 SRR1815232 BCW_6241 S. enterica Derby 58 4,813,148
MYXC00000000 SRR1815233 BCW_6242 S. enterica Derby 86 4,802,471
MYXB00000000 SRR1815235 BCW_6244 S. enterica Mbandaka 79 4,884,522
MYXA00000000 SRR1815236 BCW_6245 S. enterica Mbandaka 81 4,886,387
MYWZ00000000 SRR1815237 BCW_6247 S. enterica Johannesburg 50 4,572,794
MYWX00000000 SRR1815240 BCW_6250 S. enterica Johannesburg 49 4,571,673
MYWW00000000 SRR1815241 BCW_6251 S. enterica III_44:z4,z32 107 4,496,041
MYWV00000000 SRR1815242 BCW_6252 S. enterica III_44:z4,z33 155 4,495,655
MYWT00000000 SRR1815244 BCW_6254 S. enterica München 60 5,122,463
MYWS00000000 SRR1815245 BCW_6255 S. enterica München 52 5,123,499
MYWR00000000 SRR1815246 BCW_6256 S. enterica München 106 5,150,227
MYWQ00000000 SRR1815247 BCW_6257 S. enterica Braenderup 51 4,661,166
MYWO00000000 SRR1815249 BCW_6259 S. enterica Braenderup 66 4,655,551
MYWN00000000 SRR1815250 BCW_6260 S. enterica Johannesburg 69 4,800,375
MYWL00000000 SRR1815252 BCW_6262 S. enterica Mbandaka 253 4,848,695
MYWK00000000 SRR1815253 BCW_6263 S. enterica Mbandaka 77 4,853,598
MYWJ00000000 SRR1815255 BCW_6265 S. enterica München 77 5,213,813
MYWI00000000 SRR1815256 BCW_6266 S. enterica München 75 5,223,730
MYWH00000000 SRR1815257 BCW_6267 S. enterica München 114 4,974,278
MYWG00000000 SRR1815258 BCW_6268 S. enterica München 300 5,201,901
MYWF00000000 SRR1815259 BCW_6269 S. enterica München 76 5,235,520
MYWE00000000 SRR1815260 BCW_6270 S. enterica München 95 4,790,142
MYWD00000000 SRR1815261 BCW_6271 S. enterica München 153 5,167,111
MYWC00000000 SRR1815262 BCW_6272 S. enterica München 74 4,962,090
MYWB00000000 SRR1815263 BCW_6273 S. enterica Derby 127 4,994,272
MYWA00000000 SRR1815264 BCW_6274 S. enterica München 204 5,091,697
MYVX00000000 SRR1815267 BCW_6277 S. enterica München 108 5,304,835
MYVU00000000 SRR1815270 BCW_6280 S. enterica München 78 5,185,461
MYVS00000000 SRR1815272 BCW_6282 S. enterica München 112 4,986,299
MYVR00000000 SRR1815273 BCW_6283 S. enterica Derby 89 4,913,364
MYVP00000000 SRR1815275 BCW_6285 S. enterica München 52 4,773,141
MYVM00000000 SRR1815278 BCW_6288 S. enterica München 66 5,050,632
MYVK00000000 SRR1815280 BCW_6290 S. enterica München 46 4,687,046
MYVJ00000000 SRR1815281 BCW_6291 S. enterica Derby 73 4,808,341
MYVI00000000 SRR1815282 BCW_6292 S. enterica Derby 66 4,799,051
MYVH00000000 SRR1815283 BCW_6293 S. enterica Derby 85 4,854,721
MYVG00000000 SRR1815285 BCW_6295 S. enterica München 94 4,733,351
MYVF00000000 SRR1815286 BCW_6296 S. enterica München 66 5,299,186
MYVE00000000 SRR1815287 BCW_6297 S. enterica München 38 4,613,440
MYVA00000000 SRR1815291 BCW_6301 S. enterica Derby 87 4,914,839
MYUZ00000000 SRR1815292 BCW_6302 S. enterica Mbandaka 58 4,822,164
MYUU00000000 SRR1815299 BCW_6309 S. enterica Mbandaka 55 4,931,572
MYUT00000000 SRR1815370 BCW_6499 S. enterica Montevideo 76 4,700,200
MYUS00000000 SRR1815371 BCW_6505 S. enterica Heidelberg 71 4,539,985
MYUR00000000 SRR1815372 BCW_6510 S. enterica Worthington 84 4,715,427
MYUQ00000000 SRR1815373 BCW_6524 S. enterica Agona 42 4,589,330
MYUP00000000 SRR1815374 BCW_6525 S. enterica Agona 64 4,649,648
MYUO00000000 SRR1815375 BCW_6526 S. enterica Agona 66 4,651,722
MYUN00000000 SRR1815376 BCW_6532 S. enterica Amsterdam 63 4,706,044
MYUM00000000 SRR1815378 BCW_6559 S. enterica Dublin 61 4,882,116
MYUL00000000 SRR1815379 BCW_6571 S. enterica Dublin 64 4,882,017
MYUK00000000 SRR1815380 BCW_6579 S. enterica Dublin 93 4,972,587
MYUJ00000000 SRR1815381 BCW_6586 S. enterica Anatum 33 4,669,928
MYUI00000000 SRR1815382 BCW_6599 S. enterica 42 4,933,066
MYUG00000000 SRR1815385 BCW_6620 S. enterica Dublin 67 4,942,717
MYUF00000000 SRR1815386 BCW_6621 S. enterica Dublin 62 4,944,002
MYUE00000000 SRR1815387 BCW_6623 S. enterica Dublin 69 4,941,796
MYUD00000000 SRR1815391 BCW_6654 S. enterica Dublin 98 4,896,266
MYUC00000000 SRR1815392 BCW_6659 S. enterica Derby 38 4,877,491

ACKNOWLEDGMENTS

We thank Lucy Cai, Alvin Leonardo, Patrick Ancheta, Regina Agulto, Vivian Lee, Christina Kong, Kendra Liu, Derek Yip, Phong Nguy, and Vanessa Young for their technical assistance. Also, we gratefully acknowledge those who submitted isolates and provided funding for this project that includes funding to B.C.W. from the Agilent Thought Leader Award.

Footnotes

For a commentary on this article, see https://doi.org/10.1128/genomeA.00594-17.

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