Abstract
Ubiquitinated histone H2B (uH2B) has been purified from both calf and pig thymus by exclusion chromatography in 7 M urea. Digestion of uH2B with Staphylococcus aureus V8 protease yielded the peptide 114-125 containing the ubiquitin moiety. Further digestion of this peptide with trypsin removed the ubiquitin and three H2B residues from the N-terminus. Edman degradations of both peptides established that ubiquitin is attached to the epsilon-amino group of lysine 120 in both calf and pig uH2B by an iso-peptide bond to the C-terminal glycine 76 of ubiquitin.
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- Bachmair A., Finley D., Varshavsky A. In vivo half-life of a protein is a function of its amino-terminal residue. Science. 1986 Oct 10;234(4773):179–186. doi: 10.1126/science.3018930. [DOI] [PubMed] [Google Scholar]
- Baer B. W., Rhodes D. Eukaryotic RNA polymerase II binds to nucleosome cores from transcribed genes. Nature. 1983 Feb 10;301(5900):482–488. doi: 10.1038/301482a0. [DOI] [PubMed] [Google Scholar]
- Barsoum J., Varshavsky A. Preferential localization of variant nucleosomes near the 5'-end of the mouse dihydrofolate reductase gene. J Biol Chem. 1985 Jun 25;260(12):7688–7697. [PubMed] [Google Scholar]
- Boublík M., Bradbury E. M., Crane-Robinson C., Johns E. W. An investigation of the conformational changes of histone F2b by high resolution nuclear magnetic resonance. Eur J Biochem. 1970 Nov;17(1):151–159. doi: 10.1111/j.1432-1033.1970.tb01147.x. [DOI] [PubMed] [Google Scholar]
- Böhm L., Crane-Robinson C., Sautière P. Proteolytic digestion studies of chromatin core-histone structure. Identification of a limit peptide of histone H2A. Eur J Biochem. 1980 May;106(2):525–530. doi: 10.1111/j.1432-1033.1980.tb04599.x. [DOI] [PubMed] [Google Scholar]
- Cary P. D., King D. S., Crane-Robinson C., Bradbury E. M., Rabbani A., Goodwin G. H., Johns E. W. Structural studies on two high-mobility-group proteins from calf thymus, HMG-14 and HMG-20 (ubiquitin), and their interaction with DNA. Eur J Biochem. 1980 Dec;112(3):577–580. doi: 10.1111/j.1432-1033.1980.tb06123.x. [DOI] [PubMed] [Google Scholar]
- Ciechanover A., Finley D., Varshavsky A. The ubiquitin-mediated proteolytic pathway and mechanisms of energy-dependent intracellular protein degradation. J Cell Biochem. 1984;24(1):27–53. doi: 10.1002/jcb.240240104. [DOI] [PubMed] [Google Scholar]
- Goldknopf I. L., Busch H. Isopeptide linkage between nonhistone and histone 2A polypeptides of chromosomal conjugate-protein A24. Proc Natl Acad Sci U S A. 1977 Mar;74(3):864–868. doi: 10.1073/pnas.74.3.864. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Goldknopf I. L., Busch H. Remarkable similarities of peptide fingerprints of histone 2A and nonhistone chromosomal protein A24. Biochem Biophys Res Commun. 1975 Aug 4;65(3):951–960. doi: 10.1016/s0006-291x(75)80478-5. [DOI] [PubMed] [Google Scholar]
- Gusse M., Sautière P., Bélaiche D., Martinage A., Roux C., Dadoune J. P., Chevaillier P. Purification and characterization of nuclear basic proteins of human sperm. Biochim Biophys Acta. 1986 Oct 29;884(1):124–134. doi: 10.1016/0304-4165(86)90235-7. [DOI] [PubMed] [Google Scholar]
- Hershko A., Heller H., Eytan E., Kaklij G., Rose I. A. Role of the alpha-amino group of protein in ubiquitin-mediated protein breakdown. Proc Natl Acad Sci U S A. 1984 Nov;81(22):7021–7025. doi: 10.1073/pnas.81.22.7021. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Hunter A. J., Cary P. D. Preparation of chromosomal protein A24 (uH2A) by denaturing gel filtration and preparation of its free nonhistone component ubiquitin by ion-exchange chromatography. Anal Biochem. 1985 Nov 1;150(2):394–402. doi: 10.1016/0003-2697(85)90527-5. [DOI] [PubMed] [Google Scholar]
- Iwai K., Ishikawa K., Hayashi H. Amino-acid sequence of slightly lysine-rich histone. Nature. 1970 Jun 13;226(5250):1056–1058. doi: 10.1038/2261056b0. [DOI] [PubMed] [Google Scholar]
- Kleinschmidt A. M., Martinson H. G. Structure of nucleosome core particles containing uH2A (A24). Nucleic Acids Res. 1981 Jun 11;9(11):2423–2431. doi: 10.1093/nar/9.11.2423. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Laemmli U. K. Cleavage of structural proteins during the assembly of the head of bacteriophage T4. Nature. 1970 Aug 15;227(5259):680–685. doi: 10.1038/227680a0. [DOI] [PubMed] [Google Scholar]
- Lambert S. F., Thomas J. O. Lysine-containing DNA-binding regions on the surface of the histone octamer in the nucleosome core particle. Eur J Biochem. 1986 Oct 1;160(1):191–201. doi: 10.1111/j.1432-1033.1986.tb09957.x. [DOI] [PubMed] [Google Scholar]
- Levinger L., Varshavsky A. Selective arrangement of ubiquitinated and D1 protein-containing nucleosomes within the Drosophila genome. Cell. 1982 Feb;28(2):375–385. doi: 10.1016/0092-8674(82)90355-5. [DOI] [PubMed] [Google Scholar]
- Matsui S. I., Seon B. K., Sandberg A. A. Disappearance of a structural chromatin protein A24 in mitosis: implications for molecular basis of chromatin condensation. Proc Natl Acad Sci U S A. 1979 Dec;76(12):6386–6390. doi: 10.1073/pnas.76.12.6386. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Mueller R. D., Yasuda H., Hatch C. L., Bonner W. M., Bradbury E. M. Identification of ubiquitinated histones 2A and 2B in Physarum polycephalum. Disappearance of these proteins at metaphase and reappearance at anaphase. J Biol Chem. 1985 Apr 25;260(8):5147–5153. [PubMed] [Google Scholar]
- Nomoto M., Hayashi H., Iwai K. Tetrahymena histone H2B. Complete amino acid sequence. J Biochem. 1982 Mar;91(3):897–904. doi: 10.1093/oxfordjournals.jbchem.a133778. [DOI] [PubMed] [Google Scholar]
- Panyim S., Bilek D., Chalkley R. An electrophoretic comparison of vertebrate histones. J Biol Chem. 1971 Jul 10;246(13):4206–4215. [PubMed] [Google Scholar]
- Piña B., Suau P. Core histone variants and ubiquitinated histones 2A and 2B of rat cerebral cortex neurons. Biochem Biophys Res Commun. 1985 Dec 17;133(2):505–510. doi: 10.1016/0006-291x(85)90935-0. [DOI] [PubMed] [Google Scholar]
- Raboy B., Parag H. A., Kulka R. G. Conjugation of [125I]ubiquitin to cellular proteins in permeabilized mammalian cells: comparison of mitotic and interphase cells. EMBO J. 1986 May;5(5):863–869. doi: 10.1002/j.1460-2075.1986.tb04296.x. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Schlesinger D. H., Goldstein G., Niall H. D. The complete amino acid sequence of ubiquitin, an adenylate cyclase stimulating polypeptide probably universal in living cells. Biochemistry. 1975 May 20;14(10):2214–2218. doi: 10.1021/bi00681a026. [DOI] [PubMed] [Google Scholar]
- Siegelman M., Bond M. W., Gallatin W. M., St John T., Smith H. T., Fried V. A., Weissman I. L. Cell surface molecule associated with lymphocyte homing is a ubiquitinated branched-chain glycoprotein. Science. 1986 Feb 21;231(4740):823–829. doi: 10.1126/science.3003913. [DOI] [PubMed] [Google Scholar]
- Sun Y. L., Xu Y. Z., Bellard M., Chambon P. Digestion of the chicken beta-globin gene chromatin with micrococcal nuclease reveals the presence of an altered nucleosomal array characterized by an atypical ladder of DNA fragments. EMBO J. 1986 Feb;5(2):293–300. doi: 10.1002/j.1460-2075.1986.tb04212.x. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Wallis J. W., Hereford L., Grunstein M. Histone H2B genes of yeast encode two different proteins. Cell. 1980 Dec;22(3):799–805. doi: 10.1016/0092-8674(80)90556-5. [DOI] [PubMed] [Google Scholar]
- West M. H., Bonner W. M. Histone 2B can be modified by the attachment of ubiquitin. Nucleic Acids Res. 1980 Oct 24;8(20):4671–4680. doi: 10.1093/nar/8.20.4671. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Wu R. S., Kohn K. W., Bonner W. M. Metabolism of ubiquitinated histones. J Biol Chem. 1981 Jun 10;256(11):5916–5920. [PubMed] [Google Scholar]
- van Helden P. D., Strickland W. N., Strickland M., von Holt C. The complete amino-acid sequence of histone H2B from erythrocytes of the adult domestic fowl Gallus domesticus. Biochim Biophys Acta. 1982 Apr 21;703(1):17–20. doi: 10.1016/0167-4838(82)90004-8. [DOI] [PubMed] [Google Scholar]
- van der Westhuyzen D. R., Böhm E. L., von Holt C. Fractionation of chicken erythrocyte whole histone into the six main components by gel exclusion chromatography. Biochim Biophys Acta. 1974 Aug 8;359(2):341–345. doi: 10.1016/0005-2795(74)90233-5. [DOI] [PubMed] [Google Scholar]
- von Holt C. Histones in perspective. Bioessays. 1985 Sep;3(3):120–124. doi: 10.1002/bies.950030308. [DOI] [PubMed] [Google Scholar]

