Table 3.
A | Agonist CRF | Agonist Ucn1 | |||||
---|---|---|---|---|---|---|---|
No | CRF-CRF1R residue pair | Position in the ligand | Position in CRF1R | Cβ-Cβ [Å] constraint |
Cβ-Cβ [Å] in the CRF model |
Cβ-Cβ [Å] in the Ucn1 model |
|
1 | H13-F330 | N-term | Helix VI | 10.0 | 5.1 | H12-F330 | 5.3 |
2 | H13-F344 | N-term | Helix VII | 10.0 | 9.4 | H12-F344 | 8.7 |
3 | L15-Q173 | N-term | Helix II | 10.0 | 7.1 | L14-Q173 | 6.5 |
4 | E17-I345 | N-term | Helix VII | 10.0 | 9.2 | T16-I345 | 6.0 |
5 | V18-V120 | C-term | Helix I | 10.0 | 6.4 | L17-V120 | 4.1 |
6 | A31-E104 | C-term | Hinge | 10.0 | 8.6 | A30-E104 | 12.3 |
7 | S33-Y73 | C-term | ECD | 10.0 | 6.7 | Q32-Y73 | 10.1 |
B | Agonist Ucn1 | Agonist CRF | |||||
No | Ucn1-CRF1R Residue Pair | Position in the ligand | Position in CRF1R | Cβ-Cβ [Å] Constraint |
Cβ-Cβ [Å] In the Ucn1 model |
Cβ-Cβ [Å] In the CRF model |
|
1 | D8-Q273 | N-term | Helix V | 9.0 | 8.6 | D9-Q273 | 9.0 |
2 | D8-F330 | N-term | Helix VI | 9.0 | 4.5 | D9-F330 | 4.2 |
3 | H12-L329 | N-term | Helix VI | 9.0 | 8.0 | H13-L329 | 8.5 |
4 | H12-F330 | N-term | Helix VI | 9.0 | 5.3 | H13-F330 | 5.1 |
5 | H12-N333 | N-term | Helix VI | 9.0 | 6.9 | H13-N333 | 6.1 |
6 | H12-I345 | N-term | Helix VII | 9.0 | 8.4 | H13-I345 | 9.3 |
7 | H12-N348 | N-term | Helix VII | 9.0 | 6.5 | H13-N348 | 6.8 |
8 | H12-S349 | N-term | Helix VII | 9.0 | 9.4 | H13-S349 | 10.7 |
9 | L14-S349 | N-term | Helix VII | 9.0 | 9.0 | L15-S349 | 9.6 |
Bold – residue pairs tested in both models.
Blue – residue pairs that satisfied distance restraints.
Red – residue pairs that did not exactly satisfiy distance restraints.