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. 2017 Aug 7;12(8):e0183088. doi: 10.1371/journal.pone.0183088

Correction: Whole-Genome Saliva and Blood DNA Methylation Profiling in Individuals with a Respiratory Allergy

Sabine A S Langie, Katarzyna Szarc vel Szic, Ken Declerck, Sophie Traen, Gudrun Koppen, Guy Van Camp, Greet Schoeters, Wim Vanden Berghe, Patrick De Boever
PMCID: PMC5546635  PMID: 28787008

There is a typographical error in Table 2. Table 2 reports averaged values of multiple CpG sites in the reported gene regions instead of the average of the single CpG site corresponding to the validated cg-probes. For instance, for cg19754622 in the STK32C gene region (S1 Dataset), the authors reported the average of the 6 CpG sites that were analyzed along with the CpG-site of interest (cg19754622 = CpG1). A similar switch of data for the other two gene regions is also present.

Table 2. Comparison of methylation differences between RA cases and controls in PBMC and saliva as assessed by Illumina 450K bead chips and bisulfite pyrosequencing.

Assay cg-probe gene Blood PBMC Saliva
Mean β (%) ±SD Δβ (%) Mean β (%) ±SD Δβ (%)
RA cases Controls RA cases Controls
450K1 cg19754622 STK32C 52.39 ± 5.3 72.17 ± 21.0 -19.78* 30.62 ± 13.0 64.82 ± 28.5 -34.21*
cg08899523 FGFR2 45.15 ± 10.5 58.47 ± 9.5 -13.32* 39.52 ± 15.2 59.81 ± 9.5 -20.30*
cg11965913 PM20D1 55.24 ± 36.6 18.65 ± 17.6 36.58* 62.63 ± 33.7 21.69 ± 20.4 40.94*
pyroseq.2 cg19754622 STK32C 52.00 ± 9.8 72.00 ± 18.6 -20.00 25.20 ± 14.6 61.20 ± 27.8 -36.00*
cg08899523 FGFR2 39.80 ± 9.0 53.27 ± 11.4 -13.47 31.20 ± 14.9 51.60 ± 13.2 -20.40^
cg11965913 PM20D1 59.00 ± 32.6 25.20 ± 24.3 33.80 64.70 ± 33.9 24.80 ± 21.5 39.90*

Statistics were performed: 1using M-values with Limma package, or 2Mann-Witney U test to study differences between RA cases and controls (*P≤0.05; ^P<0.1).

The statistical analyses were performed with the correct values, so this error does not affect the results or conclusions of this study. Please see the corrected Table 2 here.

Supporting information

S1 Dataset. Pyrosequencing Data.

(XLSX)

Reference

Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

S1 Dataset. Pyrosequencing Data.

(XLSX)


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