Table 1. LAMP primers set used in this study.
Name | Sequence 5′–3′ | Position | Length |
---|---|---|---|
C. psittaciLAMP primers | |||
F3 | AGAACCGGATTAGGAGTCTT | 286 | 20 |
B3 | GCTGCTAAAGCGAGTATTGA | 548 | 20 |
FIP(F1c + F2) | TCCGCAGTTTGTTCCATCACCCAA GGGTTATTCGACAACTACT | 43 | |
BIP(B1c + B2) | ACTATGGATCGGCCACACATGGG TATGTTGCTTTGAATGGG | 41 | |
LoopF | TTCAGGTAATCACGCACTTGA | 350 | 21 |
LoopB | TTCCCCACACTATTAAACAGCA | 431 | 22 |
F2 | CAAGGGTTATTCGACAACTACT | 307 | 22 |
F1c | TCCGCAGTTTGTTCCATCACC | 387 | 21 |
B2 | GGTATGTTGCTTTGAATGGG | 472 | 20 |
B1c | ACTATGGATCGGCCACACATG | 410 | 21 |
C. pecorumLAMP primers | |||
F3 | ATCGGGACCTTCTCATCG | 22 | 18 |
B3 | GCTGTTGTAAGGAAGACTCC | 230 | 20 |
FIP(F1c + F2) | GACTAACAGTATAAGCAGTGCTG TTAGTCTGCTGTCCAACTACA | 44 | |
BIP(B1c + B2) | TTATCTCTCGTTGCAATGATAGGAG CCAACAGGATCAAACCAACTT | 46 | |
LoopF | CTGAATTCGTTGAC | 93 | 14 |
LoopB | TACTGTCTTCACC | 165 | 12 |
F2 | AGTCTGCTGTCCAACTACA | 47 | 19 |
F1c | GACTAACAGTATAAGCAGTGCTGTT | 129 | 25 |
B2 | CAACAGGATCAAACCAACTT | 210 | 20 |
B1c | TTATCTCTCGTTGCAATGATAGGAGC | 130 | 26 |