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. 2017 Sep 14;7:11624. doi: 10.1038/s41598-017-11454-z

Use of anthropogenic linear features by two medium-sized carnivores in reserved and agricultural landscapes

Georgina E Andersen 1,, Christopher N Johnson 1,2, Leon A Barmuta 1, Menna E Jones 1
PMCID: PMC5599595  PMID: 28912508

Abstract

Many carnivores are threatened by habitat loss and fragmentation. These changes create linear features and habitat edges that can facilitate foraging and/or travel. To understand the significance of anthropogenic linear features in the ecology of carnivores, fine-scaled studies are needed. We studied two medium-sized carnivores: the endangered Tasmanian devil (Sarcophilus harrisii) and the near threatened spotted-tailed quoll (Dasyurus maculatus), in a mixed landscape of conservation and agricultural land. Using GPS tracking, we investigated their use of intact habitat versus linear features such as roads, fences and the pasture/cover interface. Both species showed a positive selection for anthropogenic linear features, using the pasture/cover interface for foraging and roads for movement and foraging. Devils travelled along fence lines, while quolls showed little preference for them. Otherwise, both species foraged in forest and travelled through pasture. While devils and quolls can utilise anthropogenic linear features, we suggest that their continued survival in these habitats may depend on the intensity of other threats, e.g. persecution, and providing that sufficient intact habitat remains to sustain their ecological needs. We suggest that the management of both species and probably many other species of carnivores should focus on controlling mortality factors associated with human use of landscapes.

Introduction

Carnivores are vulnerable to habitat loss and fragmentation because they typically have low population densities, large area requirements, and are often persecuted by humans1, 2. Anthropogenic landscape alteration creates linear features which can have complex effects on carnivores, such as the ecotone between native vegetation and livestock pasture, roads, fences, and power lines. Negative effects can derive from roads and fences which obstruct movement35. Roads can also increase mortality from vehicle collisions, increase hunting and poaching by providing access to previously inaccessible habitats, and can cause stress due to noise and visual stimuli4, 5.

Linear features can also benefit carnivores. Roads and tracks may facilitate travel, enabling foraging carnivores to move further, faster6, 7. Roads, fences and power lines can also provide opportunities for hunting and scavenging, because they create edges and barriers that trap prey and furnish carcasses of animals that have died in collisions with vehicles or power lines8, 9. Agricultural landscapes frequently contain remnant patches of native vegetation that create edges; these are often rich in small vertebrates and thus concentrate prey for medium-sized carnivores10, 11. Many carnivore species, which have become invasive outside their native ranges, flourish in human-altered habitats. This is true of red foxes (Vulpes vulpes) and feral cats (Felis catus), and is also the case for some carnivores in their native range, including red foxes, raccoons (Procyon lotor) and grey foxes (Urocyon cinereoargenteus)12, 13.

Understanding how anthropogenic landscapes, and particularly the linear features they often contain, affect movement, foraging efficiency and ultimately survival is especially important for threatened and declining species. Around a quarter of extant mammalian species are threatened with extinction and the extinction risk has accelerated over the last forty years14. To evaluate the significance of linear features in the ecology of carnivores, we need detailed behavioural studies showing the extent to which they exploit or avoid them.

We examined the habitat use and fine-scaled movement within home ranges (i.e. third-order resource selection)15 of two medium-sized carnivores in a mixed conservation and agricultural landscape in Tasmania, Australia. The Tasmanian devil (Sarcophilus harrisii) is a hypercarnivorous pounce-pursuit predator and specialist scavenger with morphological specialisations for eating bone16. It weighs 5–14 kg and has a large home range (2145 ha; G. Andersen, unpublished data). The spotted-tailed quoll (Dasyurus maculatus) is a hypercarnivorous pounce or ambush predator16, that has specialised morphological adaptions to utilise arboreal habitats. It weighs 0.9–5 kg and has a smaller home range than devils (528 ha; G. Andersen, unpublished data). Both are diet generalists but primarily feed on mammals17. At our study site in northwest Tasmania, the Tasmanian devil is not yet affected by Devil Facial Tumour Disease (DFTD), that has caused severe population decline elsewhere in its range18 leading to its Endangered status on the IUCN red list19. In Tasmania, the north western part of the state is the stronghold for the spotted-tailed quoll, which is listed as Near Threatened on the IUCN red list20. To investigate the habitat use of sympatric devils and quolls, we examined only nocturnal habitat use, as while quolls can be active during the day21, devils are predominately nocturnal22. We asked the following questions: (1) how do these species utilise landscapes modified by agricultural land use? (2) to what extent do they use edges between pasture and natural vegetation? And, (3) how do roads and tracks affect movement?

Results

We GPS-collared seven adult devils (three males and four females) and four adult quolls (two males and two females) between November 2012 and February 2013, and twelve adult devils (six males and six females) and six adult quolls (five males and one female) between October 2013 and January 2014. All animals were re-trapped and their collars removed before the degradable link had corroded. One devil was collared in both years and its data in the second year were not included in analyses. Devils were collared on average for 50 days (range: 40–77 days) and quolls for 28 days (range: 10–49 days). A total of 26 361 successful GPS fixes were obtained, 19 549 for devils and 6812 for quolls. The overall GPS success rate (i.e. the number of successful fixes by an individual GPS collar in proportion to the total number of programmed fixes) was 60 ± 13% (mean ± SD) following the removal of zero fixes and GPS errors. The GPS success rate was higher for quolls (69.9 ± 11%) than devils (49.51 ± 7%). The GPS success rate for the stationary collar in scrub/heath and grass was 95%, 92.5% in pasture, and 87.5% in forest. Higher temperatures that indicated the animal was in a den were recorded on the collars for 49.95% of the devil zero fixes (temperatures over 31.3 °C) and for 23.04% of the quoll zero fixes (temperatures over 33.5 °C) (Supplementary Fig. S1). The GPS collars accurately recorded ambient temperature 74% of the time.

Habitat Selection

The final model set of habitat selection for devils included two models; the model with all covariates except for ‘Veg same’ (ωi = 73%) and the full model (ΔAIC = 1.92; ωi = 27%). Model-averaged parameter estimates revealed that devils did not select natural vegetation over pasture except for male devils which selected forest over pasture (Table 1 and Supplementary Table S1). They were eight and a half times more likely to be along a sealed road, six times more likely to be along an unsealed road and almost three times more likely to be along a 4WD track than away from a road (Table 1). Devils were ten times more likely to be along a fence and more than two and a two third times more likely to be along a pasture/cover ecotone than away from an ecotone (Table 1). Male and female devils showed a similar positive selection for all road and ecotone types (Supplementary Table S1). In addition, devils regardless of sex selected to be close to their core area (Table 1 and Supplementary Table S1).

Table 1.

Odds ratio and 95% confidence intervals of the top ranked model of Tasmanian devil (n = 18) and spotted-tailed quoll (n = 10) habitat selection.

Covariates Tasmanian devils Spotted-tailed quolls
Odds ratio 95% CI Odds ratio 95% CI
Lower Upper Lower Upper
VegForest 1.21 0.92 1.59 1.16 0.53 2.54
VegGrass 0.84 0.65 1.09 1.53 0.68 3.44
VegScrub/heath 1.12 0.87 1.43 0.89 0.40 1.95
RoadSealed 8.51 7.10 10.17 1.60 1.14 2.23
Road4WD 2.93 2.41 3.56 0.96 0.71 1.27
RoadUnsealed 6.22 4.80 8.04 2.18 1.29 3.65
EcotoneFence 10.06 7.92 12.69 1.92 0.99 3.69
EcotonePasture/cover 2.64 2.21 3.13 1.84 1.07 3.12
Veg sameYes 1.00 0.88 1.13 1.15 0.93 1.41
D core 0.99 0.99 0.99 0.99 0.99 0.99

The reference level for vegetation type was pasture, the reference level for road and ecotone type were steps away from these features and the reference level for ‘Veg same’ was no.

The most parsimonious model for habitat selection of quolls was the full model (ωi = 100%). The second best alternative model performed poorly in comparison with a ΔAIC of 14.48 for the model with all covariates except for Veg same. Quolls, regardless of sex, did not select natural vegetation over pasture (Table 1 and Supplementary Table S1). Quolls exhibited positive selection for sealed and unsealed roads compared to being away from roads (Table 1). They were almost twice as likely to be along a fence or along a pasture/cover ecotone than away from an ecotone (Table 1). Females showed a positive selection for all road and ecotone types, whereas males only showed a positive selection for unsealed roads (Supplementary Table S1). Results for females should be interpreted with caution due to the low sample size.

Effect of habitat on movement rate and turn angles

Both species moved more slowly in forest, grass (quolls only) and scrub/heath than in pasture (n = 9006 steps for devils and n = 4462 steps for quolls) (Fig. 1 and Table 2). The full model was the top model for devils along roads and the model with just road type was the top model for quolls (n = 7127 steps for devils and n = 3965 steps for quolls). Road type had a relative importance of 1 for both species (Table 2). Vegetation type and the interaction term had a relative importance of 1 for devils (Table 2). When the adjacent vegetation type was forest, grass or scrub/heath, devils moved more quickly along roads than in these vegetation types away from roads (except when forest was along 4WD tracks) (Fig. 2a). Devils moved more slowly through pasture adjacent to roads/tracks than through pasture away from roads/tracks (Fig. 2a). Quolls moved more slowly along 4WD tracks and unsealed roads but faster along the sealed road compared to movement away from roads (Fig. 2b).

Figure 1.

Figure 1

Mean (±standard error) movement rate based on 15 min fixes by vegetation type for devils (n = 18 devils, n = 9006 steps) and quolls (n = 10 quolls, n = 4462 steps).

Table 2.

Model averaged results of GLMM analyses for movement rate (log m/min) for Tasmanian devils and spotted-tailed quolls.

Fixed effects Devils RI Quolls RI
Estimate ± SE Estimate ± SE
Vegetation type Intercept 1.794 ± 0.112 1.041 ± 0.101
Veg 1 1
  Forest −0.885 ± 0.078 −0.342 ± 0.082
  Scrub/heath −0.269 ± 0.065 −0.461 ± 0.073
  Grass −0.154 ± 0.080 −0.585 ± 0.072
Road type Intercept 1.724 ± 0.100 0.550 ± 0.099
Road 1 1
  4WD −2.806 ± 0.477 −0.630 ± 0.187
  Sealed −0.783 ± 0.345 0.493 ± 0.188
  Unsealed −0.485 ± 0.248 −0.418 ± 0.127
Veg 1 na
  Forest −1.144 ± 0.089
  Scrub/heath −0.879 ± 0.074
  Grass −0.468 ± 0.089
Road * Veg 1 na
  4WD*Forest 2.280 ± 0.551
  Sealed*Forest 1.218 ± 0.393
  Unsealed*Forest 2.320 ± 0.909
  4WD*Grass 3.265 ± 0.539
  Sealed*Grass 1.194 ± 0.420
  Unsealed*Grass 1.333 ± 0.406
  4WD*Scrub/heath 4.198 ± 0.495
  Sealed*Scrub/heath 0.919 ± 0.366
  Unsealed*Scrub/heath 2.886 ± 0.289
Ecotone type Intercept 1.504 ± 0.140 1.110 ± 0.129
Ecotone 1 1
  Pasture/cover −0.494 ± 0.207 −1.206 ± 0.176
  Fence −0.289 ± 0.114 0.312 ± 0.498
Veg 1 1
  Cover 0.238 ± 0.077 −0.540 ± 0.076
Ecotone * Veg 0.58 1
  Pasture/cover*cover −0.492 ± 0.268 0.635 ± 0.669
  Fence*cover 0.283 ± 0.290 −0.653 ± 0.677
Random effect (ID) Variance Variance
Vegetation type 0.41 0.26
Road type 0.32 0.30
Ecotone type 0.36 0.25

SE = standard error and RI = relative importance of variables.

Figure 2.

Figure 2

Mean (±standard error) movement rate based on 15 min fixes for (a) devils (n = 18 devils, n = 7127 steps) and (b) quolls (n = 10 quolls, n = 3965 steps) along roads compared to movement away them.

The final model set for movement rate in ecotones included two models for devils (n = 8448 steps); the full model (ωi = 57%) and the model without the interaction term (ΔAIC = 0.62; ωi = 42%). The most parsimonious model for quolls (n = 2816 steps) was the full model (ωi = 93%). Ecotone type and vegetation type had a relative importance of 1 for both species (Table 2). The interaction between ecotone and vegetation had a relative importance of 1 for quolls and 0.58 for devils (Table 2). Both species moved slower along a pasture/cover ecotone compared to when they were moving through the landscape away from ecotones (Fig. 3). There was no difference in movement rate of devils and quolls along fences compared to movement away from any ecotone (Fig. 3). Quolls moved slower in cover compared to pasture when moving away from any ecotone and slower along the cover side of a fence (Fig. 3b and Table 2).

Figure 3.

Figure 3

Mean (±standard error) movement rate based on 15 min fixes for (a) devils (n = 14 devils, n = 8448 steps) and (b) quolls (n = 5 quolls, n = 2816 steps) along ecotones compared to movement away them.

There was a wide distribution of turning angles for both species as demonstrated in the mean vector length (r) that ranged from 0.02–0.47 and the standard error of mean(s) that ranged from 1.82–141.95° (Table 3). Devils exhibited significant directional movement in all vegetation types (except in forest where movement was tortuous), and roads and ecotones and away from roads and ecotones (Table 3). They exhibited tortuous movement when they were moving in the cover side of an ecotone (Table 3). In contrast, quolls exhibited directional movement along sealed roads and when they were moving away from an ecotone and road (Table 3). Their movement was tortuous along fences, and in a pasture/cover ecotone, regardless of whether they were moving in the cover or pasture side (Table 3). They also exhibited tortuous movement along unsealed and 4WD tracks (Table 3). Quolls exhibited directional movement in pasture, grass and scrub/heath but tortuous movement in forest (Table 3).

Table 3.

Summary statistics of Kuiper’s test for turn angle distribution near each vegetation, road and ecotone type for Tasmanian devils and spotted−tailed quolls.

n Mean turn angle (µ) Mean vector length (r) Standard error (s) k P
Devils Vegetation
 Pasture 1344 12.32° 0.27 4.08° 7.32 <0.05
 Forest 1359 289.74° 0.06 18.07° 3.07 >0.15
 Grass 1638 0.46° 0.25 3.97° 7.35 <0.05
 Scrub/heath 4665 355.18° 0.23 2.51° 13.15 <0.05
Road
 Away 5920 354.08° 0.12 4.25° 8.92 <0.05
 Sealed 518 354.10° 0.24 7.29° 5.88 <0.05
 Unsealed 297 1.27° 0.47 4.70° 6.21 <0.05
 4WD 392 356.87° 0.35 5.75° 5.30 <0.05
Ecotone
 Away 7924 0.89° 0.27 1.69° 17.88 <0.05
 Fence 287 9.38° 0.19 12.64° 2.99 <0.05
 Pasture/cover 237 340.34° 0.14 18.38° 2.02 <0.05
  Cover 111 325.98° 0.09 39.92° 1.40 >0.15
  Pasture 126 346.76° 0.19 19.14° 2.00 <0.05
Quolls Vegetation
 Pasture 1300 0.84° 0.27 4.12° 6.92 <0.05
 Forest 713 10.82° 0.02 66.63° 1.81 >0.15
 Grass 950 189.87° 0.08 15.84° 3.47 <0.05
 Scrub/heath 1499 210.38° 0.02 64.50° 2.92 <0.05
Road
 Away 5122 354.69° 0.04 13.08° 5.38 <0.05
 Sealed 97 1.12° 0.34 11.64° 2.75 <0.05
 Unsealed 232 352.35° 0.10 25.73° 2.37 >0.15
 4WD 96 112.13° 0.10 41.13° 1.32 >0.15
Ecotone
 Away 2590 356.93° 0.07 11.73° 4.29 <0.05
 Fence 31 352.96° 0.07 107.24° 0.79 >0.15
 Pasture/cover 195 8.24° 0.05 62.44° 1.30 >0.15
  Cover 118 19.63° 0.13 29.17° 1.52 >0.15
  Pasture 77 215.90° 0.08 55.77° 1.08 >0.15

Bold numbers indicates significant results (P < 0.05).

Discussion

Our results provide a clear example of medium-sized carnivores favouring certain landscape features created by humans. Devils and quolls can be regarded as generalist carnivores exhibiting habitat plasticity and the ability to use edge habitats and linear features, traits that facilitate adaptation to fragmented landscapes11, 13. Despite differing ecomorphological specialisations, we demonstrate that both a pounce-pursuit predator that is a specialised scavenger (the devil) and an ambush predator that has morphological specialisations for arboreal activity (spotted-tailed quoll) can respond to anthropogenic modification of intact landscapes in ways that enable movement and foraging opportunities. They appear use the pasture/cover interface for foraging, roads for movement and foraging and fence lines (devils only) for movement.

The creation of additional linear features in landscapes may enhance what are already natural behaviours. Natural linear features occur in the form of animal trails, creek lines, and edges between closed and open vegetation types. Carnivores, including devils and quolls, use these to hunt, to move through vegetation (for example, following trails created by wombats (Vombatus ursinus) and macropods (M Jones, pers. obs.), and to position latrines in areas of high animal traffic23, 24. Human-altered landscapes and the linear features they contain are likely to benefit many species of medium-sized carnivores, including devils and quolls, by improving prey acquisition, either by enhancing opportunities for foraging or for travel to foraging areas6, 25.

Both species exhibited slow and tortuous movements in native forest vegetation, indicating that they are possibly foraging in these areas. Faster, straight movements across pasture suggest that while they use anthropogenic vegetation they do so for directional travel. A study, approximately 60 km north of our study site, found that female spotted-tailed quolls also exhibited linear and directional movement at night in pasture21, further supporting that quolls likely travel rather than forage in pasture. This study is limited to nocturnal movement patterns when both species are active, although quolls and occasionally devils also show diurnal activity21. The two species are likely to have different habitat requirements during the day. Devils den in intact habitats during the day, such as in the coastal scrub and patches of forest (G Andersen, unpublished data) and quolls also need complex vegetation structures for dens21.

The capacity of carnivores to respond positively to fragmentation is influenced not only by landscape structure but indirectly by the responses of prey species to fragmentation and the increased length of edges or ecotones between native vegetation and pasture26. On several continents, including Australia, vertebrate prey reach high population densities in fragmented landscapes that provide a diversity of habitat types10, 27. Many species, particularly the medium-sized herbivores that are often the major prey for medium-sized carnivores, favour edges where they can take refuge in intact native vegetation during the day and emerge through the cover/pasture ecotone to forage on pasture at night28. Edges thus provide carnivores with a rich prey source10 and prey individuals are especially vulnerable to predation when they cross the ecotone twice daily29. This high concentration of prey could support higher densities of medium-sized carnivores in fragmented agricultural landscapes10, 30. Slow and tortuous movement near the pasture/cover interface suggest that devils and quolls could be foraging. This interface provides ideal conditions to ambush their primary prey species, Tasmanian pademelon (Thylogale billardierii) and Bennett’s wallaby (Macropus rufogriseus) (G Andersen, unpublished data), as they emerge from their daytime refuges in cover through the pasture/cover ecotone to feed at night on pasture28. Troy (2014) also suggested that female quolls might be using this interface for foraging.

Roads are highly attractive to carnivores because they offer food, faster travel and sites for olfactory communication, although vehicle strike can also cause significant carnivore mortality6, 7, 13. Roads provide carcasses of animals killed by vehicles, as well as concentrations of herbivores attracted to feed on green grass that grows on roadside verges where run-off from the road provides additional moisture31. The linear path of the road and the edges between the road and the surrounding vegetation creates possibilities for ambushing prey. Reflecting their specialist scavenger niche, devils show a stronger selection than quolls for sealed roads, on which there is significant road mortality of prey species32. The fast and directed movement of both devils and quolls along the sealed road, where there are often road-killed animals suggests that they use spatial memory to revisit a profitable area. Quolls, which are ambush predators, show strong selection for unsealed roads, and their slow and tortuous movement patterns on unsealed roads and 4WD tracks suggest that they may be hunting. Unsealed roads, including 4WD tracks, create a linear open space which can act as a barrier to the movement of small mammals33 which may be vulnerable to carnivores if they linger in the adjacent vegetation.

Roads provide a linear corridor that could increase the distance travelled and extent of foraging by carnivores in a night. Commuting along roads to foraging areas is documented in several medium-sized carnivores, including red foxes, raccoons and striped skunks (Mephitis mephitis)6 and may explain road use by devils and quolls. Roads also offer prominent open locations for chemical communication and many carnivores, including wolves (Canis lupus)34 and black-backed jackals (Canis mesomelas)35, as well devils and quolls, deposit faeces and scent mark with para-anal or para-cloacal gland secretions on roads. Devils deposit faeces on all road types at the study site (G Andersen, pers. obs.), and quolls have been found to deposit faeces more frequently on maintained roads than on overgrown logging tracks or within the adjacent forest36.

Fences can impede movement of wildlife and contribute to habitat fragmentation3, 37. Devils travel extensively along fence lines and their low turning angles indicate directional travel. As the fences at our study site are designed to prevent macropods from moving onto pasture to graze at night, they have been built around two of the patches of forest; macropods rest and devils den in both of these patches during the day. Constructed of 150 mm × 80 mm wire mesh with an electric wire at ground level, they are impenetrable to macropods and devils alike, unless breached by animals such as wombats digging under the fence. It is, therefore, plausible that devils are traveling along fence lines looking for a way through (G Andersen, unpublished data). They could also use fence lines as roads to quickly move through the landscape. In addition, prey species become entangled and die in these fences and devils have been observed scavenging along them (G Andersen, unpublished data).

While we have demonstrated the positive response of devils and quolls to moderate landscape fragmentation, both fences and roads also have negative effects on carnivores and other wildlife. Understanding how fences affect movement of carnivores and other wildlife, and working with landowners to develop structures to facilitate movement of key species through fences, is important to ensure connectivity among populations. The impact of roads on wildlife is of global concern4 and many carnivores are highly susceptible to mortality from vehicles5. Devils and quolls are both listed on the IUCN Red List, devils as Endangered19 and spotted-tailed quolls Near Threatened20. Road mortality is a demonstrated cause of local population decline for devils and eastern quolls38. Spotted-tailed quolls are also subject to road mortality32. Potential measures to reduce road mortality include wildlife crossing structures39, and virtual fences, consisting of flashing light and sound alarm units set out at 100 m intervals which are triggered by the headlights of approaching vehicles, which show promise in reducing road mortality of wildlife40.

Medium-sized carnivores, more than large carnivores, are thought to be better able to adapt to anthropogenic landscape alteration and fragmentation, probably because of their smaller size and area requirements and generalist ecologies12. Our study demonstrates that two species of medium-sized carnivores with contrasting ecomorphological specialisations and hunting modes can adapt to moderate landscape modification in their native range in Tasmania, Australia. Such adaptability is well known in successful invaders such as red foxes but also in some medium-sized carnivores in their native range. Our results contribute to an increasing body of literature that demonstrates such adaptability is widespread across different taxa (including marsupial as well as placental carnivores), continents and ecomorphological types (specifically hypercarnivores and scavengers in this study, as well as generalist insectivore/carnivores). Agents of mortality for carnivores abound in anthropogenic landscapes, however, and include collisions with vehicles, persecution by humans1, 5 and restrictions on movement from fences37. Carnivores also need species-specific minimum areas of structurally complex vegetation for den sites and for refuge41. Retaining linear remnants and small patches of native vegetation in agricultural landscapes is important to facilitate animal movement through the matrix42. Identifying thresholds in the degree of anthropogenic landscape modification that carnivore species can benefit from and persist within, with respect to denning and foraging habitat, and ensuring that these are not exceeded, will aid the ongoing conservation of carnivores in these habitats.

Material and Methods

Study area

The study area covered approximately 100 km2 of the Arthur-Pieman Conservation Area (Fig. 4). It encompassed native and modified vegetation, and a network of roads consisting of a 12 km section of sealed road running through the centre of the area and gravel, dirt and 4WD minor roads and tracks. Areas to the west of the sealed road were dominated by coastal scrub/heath (Leptospermum scoparium, Acacia longifolia, Melaleuca squarrosa and Leucopogon collinus) and moorland (Gymnoschoenus sphaerocephalus). The east was a mosaic of forest (Eucalyptus obliqua, Eucalyptus nitida, Melaleuca ericifolia and Leptospermum lanigerum) and agricultural land with cattle grazing on pasture. The climate is temperate, with monthly mean temperatures ranging from 9.4–16.1 °C, and mean annual rainfall of 1069 mm43.

Figure 4.

Figure 4

The study area in northwest Tasmania, Australia. Vegetation and road types are displayed. Esri ArcGIS 10.2 (https://esriaustralia.com.au/products-arcgis-software-102) and Microsoft Powerpoint (Microsoft, Seattle, WA) was used to create this figure. The vegetation layer was created using TASVEG 3.0 (Department of Primary Industries, Parks, Water and Environment, Tasmania, TASVEG 3.0, Sourced on 13th October 2013, http://dpipwe.tas.gov.au/conservation/flora-of-tasmania/monitoring-and-mapping-tasmanias-vegetation-(tasveg)/tasveg-the-digital-vegetation-map-of-tasmania) and the road layer using LIST transport (Department of Primary Industries, Parks, Water and Environment, Tasmania, LIST transport, Sourced 27th of March 2015, https://data.gov.au/dataset/list-transport-segments).

GPS telemetry

Animals were trapped in PVC pipe traps (diameter 315mm × length 875mm) and fitted with GPS collars (Quantum 4000E, Telemetry Solutions Ltd, Concord, USA) from November 2012-February 2013 and October 2013-January 2014. These periods covered times when both species are in late lactation with young in dens and when they are weaned (devils early February; quolls December). Collars weighed 185 g (devils) and 60 g (quolls), less than 3% of body weight. Animals were not sedated before collaring. Collars were fastened with corrodible links which degrade over time and eventually allow the collar to fall off44. Collar schedules were set to collect simultaneous fixes of both species. Because devils are mainly active at night22 collars were programmed to record a GPS fix every 15 min from 2030 to 0630 hours to conserve battery and to extend the duration of data collection. This study was approved by the Animal Ethics Committee at the University of Tasmania, Australia. The methods were carried out in accordance with the approved guidelines and regulations.

GPS data screening

Animal locations obtained through GPS contain errors due to missing location fixes or location errors of successfully acquired fixes45. These must be removed. First, we visually screened for GPS errors and spikes using ‘adehabitatLT’46 in R version 3.1.3 (R Development Core Team 2015). Second, because Horizontal Dissolution of Precision (HDOP) is related to location error47, we determined an appropriate HDOP threshold to ensure that positional accuracy was similar to the resolution of our vegetation data (±5 m). A low HDOP value represents a higher level of precision as the satellites used to generate the fix are widely dispersed across the sky45. We placed a stationary test collar in our study site that was left recording 15 minute fixes for two days. The Euclidean distance between each recorded location and the true location, which was measured with a handheld GPS unit (Garmin GPSMAP 78, Garmin Ltd, USA) was calculated and we noted the corresponding HDOP value. The mean linear error for each HDOP value (prior to fix clean up) was then calculated and we retained only GPS fixes with a dilution of precision (HDOP) of <7. Mean GPS error was 7.12 ± 0.41 m.

To investigate whether vegetation type influenced the success rate of location fixes obtained by the GPS units in tracking collars, we conducted two tests. First, we placed a stationary test collar, which was programmed to record 15 minute fixes for two nights, in each of the four vegetation types. Second, we plotted the temperature (ambient temperature measured by GPS collars) of zero fixes (GPS failed to record a fix) and active fixes (step length >20 m for 15 min fixes) for both species. Devils have a minimum body temperature of 31.3 °C22, therefore if the temperature of zero fixes is >31.3 °C we have assumed that the devil is resting on the collar (most likely in a den) and the lack of a fix was not due to vegetation type. The minimum body temperature of spotted-tailed quolls is unknown but we assumed it to be the same as eastern quolls (Dasyurus viverrinus), which is 33.5 °C22. A study by Jones et al. (1997)22 and Andersen et al. (unpublished data) found that devils spend half of the night resting in a den, where the GPS collar will be unable to get a fix. Therefore, we expect a high number of zero fixes associated with high temperatures recorded on the collars for devils. We conducted a test of the accuracy of the GPS units in recording temperature at higher and lower ambient temperatures, and during zero fixes when the collar could not obtain a satellite connection. Ten GPS collars were programmed to record fixes every 10 minutes for an hour at various temperatures and ambient temperature was measured with a mercury thermometer.

Habitat selection

A vegetation and road map of the study site was created in ArcGIS 10.2 (ESRI, Redlands, CA) using the Tasmanian vegetation mapping spatial database TASVEG 3.048 and LIST Transport49, and verified through high resolution (1:2000) digital orthophotographs (Department of Primary Industries, Parks, Water and Environment, Tasmania, Australia). We combined structurally similar vegetation communities into four categories and categorized roads and tracks according to structure and amount of traffic (Table 4). Home-range (the area containing 100% of the locations) and core-area size (the area containing 50% of the locations) for each animal were determined using movement-based kernel density estimation methods (MKDE)50. As MKDE benefits from serial autocorrelated data50 we used data at 15 min intervals.

Table 4.

Description of the habitat covariates used in analyses of anthropogenic habitat use of Tasmanian devils and spotted-tailed quolls.

hbp Variable Description
Vegetation type Pasture Grass paddocks with cattle (height <0.5 m)
Forest Eucalyptus obliqua, E. nitida, Melaleuca ericifolia and M. squarrosa swamp forest
Scrub/heath Leptospermum lanigerum, costal heathland, Acacia longifolia and M. squarrosa scrub
Grass Native grassland, buttongrass moorland and wetlands (height > 0.5 m)
Road type Away Steps not on a road
Sealed The main road that runs through the centre of the study site
Unsealed Receives moderate amount of traffic
4WD Receives limited or no traffic
Ecotone type Away Steps not in an ecotone
Pasture/cover Interface between vegetation and pasture
Fence Wildlife-proof fences that were placed on ecotones between cover and pasture

We used step selection functions (SSF)51 based on sequential successful 15 minute fixes to examine habitat selection for devils and quolls and for each sex. For each observed step, 14 random steps were generated within each animal’s 100% MKDE home range polygon, to compare the habitat or feature selected by the animal to a range of ‘available’ habitats/features. To create the random steps, we first created probability distributions of a devil or quolls step length and turn angle based on 15 minute fixes and then used these probability distributions to randomly select 14 points. Random points were then assigned the habitat variable of interest using the vegetation map. Home range polygons did not include the ocean, so no random fixes were located at implausible locations. We created a 20 m buffer either side of a road or track and categorised steps that fell within this buffer to be in the vicinity of and therefore potentially influenced by the road. Similarly, we created a 20 m buffer either side of an interface between vegetation and pasture (‘pasture/cover’) and either side of wildlife-proof fences (‘fence’) to account for any influence of ecotones. We used steps ‘away’ from an ecotone or road type as a reference level (Table 4), as we aimed to characterize changes in habitat selection or movement rate near these features to habitat selection/movement rate away from them.

Models were created using case-control logistic regression52 using the package ‘survival’53 in the statistical programme R version 3.1.354. The animal’s selection is measured as an odds ratio, which is a measure of effect size and describes the strength of association between two binary data values. It represents the magnitude of change in the odds selection for each unit of the predictor variable. Devil and quoll individual ID was treated as a random effect in models. We included vegetation type, road type, ecotone type and distance to the nearest core area polygon edge (‘D core’) (continuous variable) as parameters in the model selection analysis. Because the animal’s selection of vegetation type in successive GPS fixes may be dependent on the last vegetation type it was in, we fitted a binary ‘carry-over’ variable (‘Veg same’), describing whether the vegetation type was equal to the previous fix. We tested for collinearity among explanatory variables using chi-squared tests. An information theoretic framework was used to rank competing models based on Akaike’s information criterion corrected for small sample sizes (AICc)55; models within a ΔAICc of two were considered the most plausible, with substantial empirical support. In addition, we used Akaike weights (ωi) to gauge the relative importance of variables that influence habitat selection.

Effect of habitat on movement rate and turn angles

We constructed separate generalized linear mixed models (GLMMs) for each of the three habitat covariates described in Table 1 for devils and quolls based on 15 minute fixes. Movement between two successive locations was defined as a step and average step rate per minute was calculated. For all analyses, we log-transformed (loge) movement rate (m/min) to meet the assumptions of normality and fitted it as the response term. Following Troy (2014), active fixes (step length ≥ 21 m) and inactive fixes (step length ≤ 20 m) were included in analyses but long periods of rest (≥6 hours where all step lengths and the total net displacement ≤ 20 m) were excluded from analysis21. Inclusion of inactive fixes allows for short periods of rest and prey handling. Devil and quoll individual ID was included as a random variable to account for repeated observations of the same individual. In the devil and quoll model containing ecotone type, we combined forest, grass and scrub/heath into a category called ‘cover’ to contrast movement in the vegetation side of an ecotone to movement in the pasture side of an ecotone. Vegetation type (‘cover’ or ‘pasture’), ecotone type and their interaction were included as fixed factors. The devil road type model included vegetation type, road type and their interaction as fixed factors. The quoll road type model included only road type, as there were not enough steps in some vegetation types near roads to include vegetation type. Only steps that had both locations within an ecotone, road type or vegetation type were used in all models. Statistical analyses for movement rates were undertaken using the ‘nlme’ package56 in R version 3.1.354. Parameter estimates were averaged across the final model set and the relative importance of predictor variables was assessed by summing Akaike weights across all models in which the variable appeared55.

We examined the turning angle of steps within a vegetation type, road type and ecotone type using circular statistics57 using the ‘circular’ package58 in R version 3.1.354. We also examined the turning angle of steps within the cover and pasture side of the pasture/cover ecotone. Turn angles were calculated as the clockwise angle relative to the movement trajectory. We computed the mean turning angle (µ), mean vector length (r) and standard error (s) for the distribution of turning angles. The mean vector (r) is a measure of directionality for circular data that ranges from 0 (angles are distributed randomly) to 1 (all angles are identical). We tested for directionality of movement within each ecotone type, road type and vegetation type using Kuiper’s test of uniformity. The null hypothesis in the Kuiper’s test states that angles are uniformly distributed around the circle, which corresponds to tortuous movement. Directional travel is commonly associated with movement behaviours such as movement between patches, maintenance of territory, and mate seeking behaviours, whereas tortuous movement is often indicative of foraging59, 60.

Data availability

The datasets generated during and analysed during the current study are available from the corresponding author on reasonable request.

Electronic supplementary material

Acknowledgements

We thank the Tasmanian Parks and Wildlife Service for permission to conduct this study in the Arthur-Pieman Conservation Area and Westmore Pastoral Company for permission to trap on their land. We also thank the many volunteers who kindly assisted with field work and Hugh McGregor for statistical advice. Funding was provided by an Australian Research Council Discovery Scheme grant, a Holsworth Wildlife Research Endowment and a Dr Eric Guiler research grant from the Save the Tasmanian Devil Appeal, University of Tasmania Foundation.

Author Contributions

G.E.A., M.E.J. and C.N.J. conceived the ideas and designed methodology; G.E.A. collected the data; G.E.A., M.E.J. and L.A.B. analysed the data; G.E.A., M.E.J. and C.N.J. led the writing of the manuscript. All authors reviewed and approved the manuscript.

Competing Interests

The authors declare that they have no competing interests.

Footnotes

Electronic supplementary material

Supplementary information accompanies this paper at doi:10.1038/s41598-017-11454-z

Publisher's note: Springer Nature remains neutral with regard to jurisdictional claims in published maps and institutional affiliations.

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Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Data Availability Statement

The datasets generated during and analysed during the current study are available from the corresponding author on reasonable request.


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