Table 3. Estimated number of P elements identified by TEMP and normalized coverage in pool-seq samples from three worldwide populations of D. melanogaster.
Columns for TEMP labeled raw and filtered represent output generated before or after default filtering by McClintock, respectively, and data shown are the sum of the number of insertions weighted by sample frequency (see Materials and Methods for details).
| Population | # strains | TEMP raw weighted | TEMP filtered weighted | Coverage |
|---|---|---|---|---|
| N. America | 15 | 36.2 | 7.3 | 22.8 |
| N. America | 30 | 37.5 | 5.4 | 23.0 |
| Europe | 20 | 53.1 | 14.1 | 37.8 |
| Europe | 39 | 47.4 | 7.4 | 34.8 |
| Africa | 15 | 54.6 | 15.9 | 35.6 |
| Africa | 32 | 53.3 | 5 | 33.8 |