L-securinine inhibits the proliferation of A549 lung cancer cells and promotes DKK1 promoter methylation

Abstract

L-securinine is a natural product extracted and isolated from the leaf of dried Securinega suffruticosa. The aim of the present study was to explore the effects of L-securinine on proliferation, and the methylation profile of the dickkopf-related protein 1 (DKK1) gene in human lung cancer cells and fibroblasts. L-securinine was extracted, isolated and the structure was identified. The cytotoxicity of L-securinine in A549 cells was evaluated by Cell Counting Kit-8 assays. The expression and DNA methylation profile of DKK genes was analyzed by reverse transcription-quantitative polymerase chain reaction and bisulfite sequencing polymerase chain reaction, respectively. L-securinine inhibited the proliferation of lung cancer cells; the half-maximal inhibitory concentration values were 8.92, 4.73 and 3.81 µg/ml, at 24, 36 and 48 h post-treatment, respectively. DKK1, 2 and 3 expression was significantly increased in A549 cells compared with HLF-a cells. L-securinine induced the downregulation of DKK1 in A549 cells in a dose-dependent manner and induced methylation changes at CpG sites in the DKK1 promoter region. L-securinine may be a potential anticancer drug that mediates its effects by altering DKK1 gene methylation.

Introduction

Lung cancer remains the primary cause of cancer-associated mortality worldwide with a 5-year survival rate of <15% (1), despite advances in diagnostic and therapeutic approaches. Significant advances have been made in understanding cancer biology, including lung cancer, with the identification of oncogenic drivers of the disease (2).

In the present study, the cytotoxicity of L-securinine in human lung cancer A549 cells was evaluated. Securinines, including the two optical isomers L-securinine and D-securinine, are a class of natural products isolated from the plants of the Euphorbiaceae family. Securinine was extracted and isolated from Securinega suffruticosa (3) and structurally characterized in 1963 (4). Securinine has been applied as a treatment for blood (5,6) and nervous system diseases (7–9). Previous publications have reported that L-securinine can induce cell apoptosis in human breast cancer MCF-7 cells (10) and human promyelocytic leukemia HL-60 cells (11).

The Wnt signaling pathway is involved in a wide range of developmental and physiological processes, including cell fate specification, tissue morphogenesis and homeostasis (12). The loss or gain of function of Wnt pathway components can result in the development of hepatocellular, lung or colon cancer (13). Certain factors of the Wnt signaling pathway have been considered as potential therapeutic targets for cancer treatment (14). Dickkopf-related proteins (DDKs) are Wnt signaling pathway inhibitors that are frequently inactivated in certain types of human cancer (12). In the present study, the expression of DKK genes in A549 cells treated by L-securinine was determined by reverse transcription-quantitative polymerase chain reaction (RT-qPCR).

Epigenetics is defined as the mechanism by which cells transfer environmental change-induced phenotypes to their daughter cells (15). Epigenetic changes are heritable changes in gene expression that do not alter the primary DNA sequence (16). Emerging evidence suggests that epigenetic changes, including genomic methylation, serve crucial regulatory roles in X-chromosome inactivation, mammalian development, gene silencing, retrotransposon silencing and genomic imprinting (17). Aberrant methylation profiles of genes are associated with cancer, in addition to autoimmune disease, psychiatric and neurodegenerative disorders, diabetes and heart disease (18). The addition of a methyl group to the carbon-5 position of the cytosine present in the CpG dinucleotides is a common methylation event of DNA in eukaryotes (19). These CpG dinucleotides act as either CpG islands or as dispersedly distributed CpG motifs within gene promoter regions. Multiple methods, including methylation-specific PCR, methylation-sensitive restriction enzyme PCR, pyrosequencing and bisulfite sequencing PCR (BSP), can be used to detect the CpG islands and motifs (20). Nevertheless, BSP is the gold standard for detecting DNA methylation (21). BSP was used to detect the DNA methylation profile of DKK1 genes in the present study.

Material and methods

Extraction, isolation and structure identification of L-securinine

A total of 700 ml H₂SO₄ solution (pH 1–2) was added to a leaf of dried Securinega suffruticosa (obtained from Traditional Chinese Medicine and Natural Products, Jinan University, Guangzhou, China) in a 1,000 ml beaker to be moistened sufficiently for 20 min before being transferred to a percolator and percolated at a rate of 4–5 ml/min. The acidic extract was collected and passed through a cationic exchange column, which was packed with 80 g wet resin, at the rate of 4–5 ml/min. The resin was then washed and dried at room temperature. The dried resin was alkalified with ammonia water (pH 8–9). Benzin was used to elute the resin for 2.5 h at 60°C. The resin petroleum extract was parboiled with agitation at 50°C, then filtered until the crystals were separated out. Spectral techniques, including infra-red spectroscopy, ultraviolet-visible spectroscopy, mass spectrometry and nuclear magnetic resonance spectroscopy were used to identify the structure of the crystal, and X-ray crystallography, circular dichroism and Mosher chiral reagents were used to determine the absolute configuration of the product, as previously described (22,23). Finally, L-securinine was extracted and isolated, as described in the previous studies (Fig. 1).

Figure 1.

Structure of L-securinine. L-securinine was extracted and isolated from the leaf of dried Securinega suffruticosa. Spectral techniques, including infra-red spectroscopy, ultraviolet-visible spectroscopy, mass spectrometry and nuclear magnetic resonance were used to identified the structure of the crystal, and X-ray crystallography and circular dichroism were used to determine the absolute configuration.

Cell culture

The human lung cancer A549 cell line and human lung fibroblast HLF-a cell line (Cell Bank of Type Culture Collection of Chinese Academy of Sciences, Shanghai, China) were cultured in RPMI-1640 supplemented with 10% heat-inactivated fetal bovine serum (FBS) (both from Thermo Fisher Scientific, Inc., Waltham, MA, USA), penicillin (10 U/ml) and streptomycin (10 µg/ml), in a humidified incubator (Sanyo XD-101; Sanyo Electric Co., Ltd., Osaka, Japan) with 5% CO₂ at 37°C.

Cell cytotoxicity

The exponentially growing human lung cancer cell suspension (5,000 cells/100 µl) was seeded into each well of 96-well plates. The cells were pre-incubated for 24 h in the humidified incubator at 37°C with 5% CO₂. Various concentrations of L-securinine from 0 to 160 µg/ml (10 µl) were added into each well. The cells were then incubated for 24, 36 and 48 h in the incubator. CCK-8 solution (10 µl; cat no. KGA317; Nanjing KeyGen Biotech Co., Ltd., Nanjing, China) was added to each well and incubated for 3 h. The absorbance of the wells at 450 nm was measured using a microplate reader (ELx800; BioTek Instruments, Inc., Winooski, VT, USA). The inhibition rate (IR) of cell proliferation was calculated according to the following formula: IR = [1 - (average A450 values of the experimental group - average A450 values of the blank group)/(average A450 values of the control group-average A450 values of the blank group)] ×100%. The experimental groups and the control groups refer to the cells in the 96-well plates treated with or without L-securinine, respectively. The blank groups refer to the lung cancer cell suspension in the wells of 96-well plates replaced by physiological saline.

RT-qPCR

The RT-qPCR assays were performed on HLF-a and A549 cells treated with or without L-securinine to determine the expression of the DKK genes. Total RNA was extracted from the cells using TRIzol reagent (cat no. 15596-026; Invitrogen; Thermo Fisher Scientific, Inc.). Complementary DNA (cDNA) was synthesized from the extracted RNA using a cDNA synthesis kit (cat no. PC0002; Fermentas; Thermo Fisher Scientific, Inc.), according to the manufacturer's protocol. Each PCR reaction was performed in a final volume of 20 µl that contained 2 µl cDNA, 10 µl SYBR-Green Master Mix (cat no. QPK-201; Takara Bio, Inc., Otsu, Japan), 0.8 µl of the primer mixture (forward and reverse; 10 µmol) and 7.2 µl DEPC water. PCR reactions were performed using the FTC-3000 real-time fluorescence quantitative PCR system (Funglyn Biotech, Inc., Ontario, Canada). The thermocycling conditions were as follows: 95°C for 180 sec, followed by 40 cycles of 95°C for 5 sec and 60°C for 30 sec. The experiment was repeated three times and all data were compared with GAPDH gene using the 2^−∆∆Cq method (24). The sequences of specific primers for GAPDH and target genes were as follows: GAPDH forward, 5′-TGTTGCCATCAATGACCCCTT-3′ and reverse, 5′-CTCCACGACGTACTCAGCG-3′; DKK1 forward, 5′-GGGGTGAAGAGTGTTAAAGGTTT-3′ and reverse, 5′-CCCAAAATCCTAACTACAAAAAACA-3′; DKK2 forward, 5′-GCTGTGCTCGTCATTTCTGGA-3′ and reverse, 5′-TTGGAGGAGTAGGTGGCATCTT-3′; DKK3 forward, 5′-GCGAGGTTGAGGAACTGATGG-3′ reverse, 5′-CCTTCGTGTCTGTGTTGGTCTC-3′.

DNA extraction and bisulfite treatment

The A549 cells were treated with 5.0 µg/ml L-securinine and 10.0 µg/ml 5-azacytidine (cat no. A2385; Sigma-Aldrich; Merck KGaA, Darmstadt, Germany). Genomic DNA was extracted from HLF-a and A549 cells using a DNA extraction kit (Aidalb Biotechnologies Co., Ltd., Beijing, China) according to the manufacturer's protocol. Then the genomic DNA was treated with sodium bisulfite using the EZ DNA Methylation™-GOLD kit (Zymo Research, Irvine, CA, USA) following the manufacturer's protocol.

BSP amplifiction

The BSP primer of DKK1 was designed using ABI Methyl Primer Express 1.0 software (Applied Biosystems; Thermo Fisher Scientific, Inc.). The primer sequence was as follows: Forward, 5′-GGGGTGAAGAGTGTTAAAGGTTT-3′ and reverse, 5′-CCCAAAATCCTAACTACAAAAAACA-3′. The PCR reaction was performed on the ABI 7500 Fast Real-Time PCR platform (Applied Biosystems; Thermo Fisher Scientific, Inc.) in a volume of 50 µl containing 5 µl buffer (10X), 5 µl dNTPs (2 mM), 3 µl MgSO₄ (25 mM), 1.5 µl forward primer (10 pmol/µl), 1.5 µl reverse primer (10 pmol/µl), 1 µl KOD-Plus-Neo (1.0 U/µl), 31 µl ddH₂O and 2 µl DNA template. The thermocycling conditions were as follows: 94°C for 2 min, 98°C for 10 sec for 25–45 cycles, 68°C for 30 sec, followed by 94°C for 2 min, 98°C for 10 sec, T_m°C for 30 sec for 25–45 cycles, 68°C for 30 sec. The amplified products were sent to Sangon Biotech Co., Ltd. (Shanghai, China) for sequence analysis.

Statistical analysis

The data were processed using Microsoft Excel 2007 (Microsoft Corporation, Redmond, WA, USA) and SPSS 16.0 software (SPSS, Inc., Chicago, IL, USA) and presented as the mean ± standard deviation. Statistically significant differences between two groups were analyzed using the Student's t-test, and pairwise comparison among the groups was performed using the Student-Newman-Keuls test. P<0.05 was considered to indicate a statistically significant difference.

Results

L-securinine inhibited the growth of A549 cells

The CCK-8 assay was used to determine the effects of L-securinine on the proliferation of A549 cells. L-securinine decreased the proliferation of A549 cells in a dose- and time-dependent manner (Fig. 2), with half maximal inhibitory concentration (IC₅₀) values of 8.92, 4.73 and 3.81 µg/ml at 24, 36 and 48 h post-treatment, respectively. An extract is considered cytotoxic when it possesses an IC₅₀ value ≤20 µg/ml (25); therefore L-securinine is cytotoxic against A549 cells.

Figure 2.

L-securinine inhibits the growth of A549 cells. A CCK-8 assay was used to determine the effects of L-securinine on the proliferation of A549 cells. The IR of cell proliferation was calculated according to the following formula: IR = [1 - (average A450 values of the experimental group-average A450 values of the blank group)/(average A450 values of the control group-average A450 values of the blank group)] ×100%. L-securinine decreased the viability of A549 cells in a dose-and time-dependent manner, with half-maximal inhibitory concentration values of 8.92, 4.73 and 3.81 µg/ml, at 24, 36 and 48 h, respectively. IR, inhibition rate.

DDK expression in A549 and HLF-a cells

The A549 and HLF-a cell lines represent human lung cancer cells and lung fibroblasts, respectively. RT-qPCR assays were used to measure the expression of DKK1, 2 and 3 in HLF-a and A549 cell lines. DKK1, DKK2 and DKK3 expression was significantly increased in A549 lung cancer cells compared with HLF-a lung fibroblasts (P≤0.001; Table I and Fig. 3).

Table I.

Reverse transcription-quantitative polymerase chain reaction analysis of DKK expression in A549 and HLF-a cell lines.

Human lung cell lines	DKK1/GAPDH	DKK2/GAPDH	DKK3/GAPDH
HLF-a	1.003±0.02	1.004±0.07	1.005±0.12
A549	2.33±0.17	15.71±0.55	759.45±141.15
t-value	13.08	45.64	9.31
P-value	<0.001	<0.001	0.001

DKK, dickkopf-related protein.

Figure 3.

Expression of (A) DKK1, (B) DKK2 and (C) DKK3 in HLF-a cells and A549 cells. Reverse transcription-quantitative polymerase chain reaction assays were used to measure the expression of DKK1, 2 and 3 genes in HLF-a cells and A549 cells treated without or with 2.5, 5, 10 µg/ml L-securinine. DKK1, DKK2 and DKK3 expression in the A549 cells were significantly increased compared with that in HLF-a cells. DKK1 gene expression, but not DKK2 or 3 expression, was significantly downregulated following treatment with L-securinine. ^▲P<0.05 vs. HLF-a (t-test); *P<0.05 vs. A549, ^#P<0.05 vs. A549 + 2.5 µg/ml L-sec and ^&P<0.05 vs. 5 µg/ml L-sec (Student-Newman-Keuls test). DKK, dickkopf-related protein.

DDK expression in A549 cells treated with L-securinine

A549 cells were treated without or with L-securinine at 2.5, 5.0 and 10.0 µg/ml for 48 h. DKK1, DKK2 and DKK3 expression were then measured using RT-qPCR. DKK1 expression was significantly decreased in a dose-dependent manner following treatment with L-securinine compared with untreated cells (P<0.05); however, no significant differences were observed in DKK2 or 3 expression levels in treated compared with untreated cells (Table II and Fig. 3).

Table II.

Reverse transcription-quantitative polymerase chain reaction analysis of DKK expression in A549 cell lines.

Concentration of L-securinine (µg/ml)	DKK1/GAPDH	DKK2/GAPDH	DKK3/GAPDH
0	2.33±0.17	15.71±0.55	759.45±141.15
2.5	1.53±0.08a	17.28±5.07	838.16±31.67
5.0	1.26±0.02b	13.26±2.06	784.56±227.69
10.0	1.14±0.05c	14.53±2.74	845.29±151.86
F value	85.33	0.94	0.217
P-value	<0.001	0.467	0.882

DKK, dickkopf-related protein.

^aP<0.05 vs. 0 µg/ml;

^bP<0.05 vs. 2.5 µg/ml;

^cP<0.05 vs. 5 µg/ml (Student-Newman-Keuls test).

Methylation profile at CpG sites within the DKK1 promoter region

The DKK1 gene was extracted from HLF-a cells, A549 cells, A549 cells treated with L-securinine and A549 cells treated with 5-azacytidine. The methylation profiles at 11 CpG sites of the DKK1 promoter region were detected using BSP (Fig. 4). 5-azacytidine is a demethylating agent typically used in methylation research for a comparison with other sources of methylation or demethylation (26). The third, the sixth and eleventh CpG sites were methylated specifically in the DKK1 gene extracted from the A549 cells treated with L-securinine compared with untreated A549 cells. However, only the third and eleventh CpG sites were methylated specifically in A549 cells treated with L-securinine compared with cells treated with 5-azacytidine. Combined with the aforementioned RT-qPCR results, there may be an association between the methylation changes at CpG sites in the DKK1 promoter region and changes in the expression level of DKK1 gene following treatment with L-securinine.

Figure 4.

Methylation profile at CpG sites within the DKK1 promoter region. Methylation profile at 11 CpG sites of the DKK1 promoter region were detected using B bisulfite sequencing polymerase chain reaction. Grey indicates where DKK1 gene variation may have occurred in HLF-a cells. Blue indicates where no methylation was detected in the promoter of the DKK1 gene from the A549 cells. Yellow indicates the third, the sixth and the eleventh CpG sites were methylated specifically in the DKK1 gene in the A549 cells treated with L-securinine. DKK, dickkopf-related protein.

Discussion

Lung cancer remains the leading cause of cancer-associated mortalities worldwide, despite improved tools for early detection. Therapeutic stratification would be expected to increase the survival rate (27,28). Although certain targeted drugs, including epidermal growth factor receptor tyrosine-kinase and anaplastic lymphoma kinase/proto-oncogene tyrosine-protein kinase ROS inhibitors (29) have been used in the clinic, their cost (30) and acquired resistance (31) remain challenges for their use in the treatment of lung cancer. Therefore further studies are required to identify alternative treatment strategies. Securinine has previously been used in the clinic for the treatment of blood and nervous system diseases (32); therefore, the pharmacokinetic and pharmacodynamics properties of securinine are well understood.

Identifying alterations in the signal transduction pathways that promote lung cancer, including epigenetic modifications, may reveal biomarkers that can be used for the diagnosis and treatment of lung cancer (33). The proteins encoded by the DKK genes represent the dickkopf family of proteins, which negatively regulate the Wnt signaling pathway (12). Data from the present study demonstrated that DKK1, DKK2 and DKK3 expression is significantly increased in lung cancer cells compared with lung fibroblasts. A previous meta-analysis revealed that DKK1 is a potential biomarker for lung cancer diagnosis (34). It has previously been reported that DKK1, as a secreted protein with two cysteine rich regions, negatively regulates the Wnt signaling pathway (35).

Epigenetic changes are prevalent in all types of cancer, serve central roles in DNA replication and repair, protein structure and function, and can be regulated with chemical agents (36,37). However, the anticancer drugs that can target gene methylation have not yet been applied to clinical therapy. The present study revealed that L-securinine regulates DNA methylation in the DKK1 promoter, therefore L-securinine may be a potential therapeutic agent that can target changes in gene methylation in lung cancer cells.

In the present study, the IC₅₀ values and growth-inhibitory curves of A549 cells treated by L-securinine were analyzed. According to the IC₅₀ values and growth-inhibitory curves, the appropriate concentration of L-securinine was selected to treat A549 cells and analyze of the expression of DKK genes following treatment. DKK1 expression was demonstrated to be significantly decreased in A549 cells treated with L-securinine compared with that in untreated cells. The methylation profile of the DKK1 promoter was explored to identify the molecular mechanisms underlying the effect of L-securinine on DKK1 expression. Compared with 5-azacytidine, L-securinine promoted the methylation of the DKK1 promoter.