Table 8:
Summary of R. delavayi genome annotation
| Gene | Gene numbers | Average gene | Average CDS | Average exons | Average exon | Average intron | |
|---|---|---|---|---|---|---|---|
| set | of prediction | length (bp) | length (bp) | per gene | length (bp) | length (bp) | |
| De novo | AUGUSTUS | 42 672 | 2623.41 | 974.42 | 4.76 | 204.56 | 438.16 |
| GENSCAN | 35 859 | 11 242.68 | 1186.91 | 6.35 | 186.87 | 1879.03 | |
| Homolog | A. chinensis | 45 449 | 3501.48 | 846.20 | 3.21 | 263.43 | 1200.29 |
| A. thaliana | 31 950 | 3724.50 | 994.90 | 4.07 | 244.30 | 888.41 | |
| C. annuum | 47 672 | 2558.30 | 805.26 | 3.01 | 267.50 | 872.00 | |
| M. guttatus | 34 616 | 3454.51 | 963.76 | 3.95 | 244.21 | 845.35 | |
| S. lycopersicum | 38 800 | 3324.95 | 917.11 | 3.74 | 245.47 | 880.01 | |
| S. tuberosum | 39 085 | 2958.21 | 850.18 | 3.22 | 263.79 | 948.30 | |
| GLEAN | 29 585 | 4126.65 | 1150.32 | 4.84 | 237.78 | 775.53 | |
| RNA-seq | 38 273 | 2989.97 | 828.78 | 3.45 | 240.07 | 881.29 | |
| Final set | 32 938 | 4434.22 | 1153.21 | 4.62 | 249.70 | 785.08 |