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Proceedings of the National Academy of Sciences of the United States of America logoLink to Proceedings of the National Academy of Sciences of the United States of America
. 2017 Nov 7;114(47):E10074–E10082. doi: 10.1073/pnas.1712309114

Cell-to-cell variation sets a tissue-rheology–dependent bound on collective gradient sensing

Brian A Camley a,b,c,1, Wouter-Jan Rappel c
PMCID: PMC5703308  PMID: 29114053

Significance

Cells cooperate to sense the direction of a chemical gradient by communicating with each other, which may be important when clumps of cancer cells metastasize or embryos develop. However, because each cell is distinct, we find these clumps are biased toward cells that are “loud”—sending inappropriately large signals. Cell clusters can reduce this bias by rearranging themselves so loud cells change their locations. This means the mechanical dynamics of the cluster matter—fluid, squishy clumps of cells are better at sensing than solid ones. If a single cell’s motion gets noisier, it will make the cluster more fluid—so adding noise can actually make a cluster of cells a better sensor.

Keywords: fundamental bounds, collective motion, chemotaxis, cell-to-cell variability, rheology

Abstract

When a single cell senses a chemical gradient and chemotaxes, stochastic receptor–ligand binding can be a fundamental limit to the cell’s accuracy. For clusters of cells responding to gradients, however, there is a critical difference: Even genetically identical cells have differing responses to chemical signals. With theory and simulation, we show collective chemotaxis is limited by cell-to-cell variation in signaling. We find that when different cells cooperate, the resulting bias can be much larger than the effects of ligand–receptor binding. Specifically, when a strongly responding cell is at one end of a cell cluster, cluster motion is biased toward that cell. These errors are mitigated if clusters average measurements over times long enough for cells to rearrange. In consequence, fluid clusters are better able to sense gradients: We derive a link between cluster accuracy, cell-to-cell variation, and the cluster rheology. Because of this connection, increasing the noisiness of individual cell motion can actually increase the collective accuracy of a cluster by improving fluidity.


Many cells follow signal gradients to survive or perform their functions, including white blood cells finding a wound, cells crossing a developing embryo, and cancerous cells migrating from tumors. Chemotaxis, sensing and responding to chemical gradients, is crucial in all of these examples (1, 2). Chemotaxis is traditionally studied by exposing single cells to gradients—but cells often travel in groups, not singly (3, 4). Collective cell migration is essential to development and metastasis (5) and can have remarkable effects on chemotaxis. Even when single cells cannot sense a gradient, a cluster of cells may cooperate to sense it. While collective chemotaxis is our primary focus, this “emergent” gradient sensing is found in response to many signals, including soluble chemical gradients (chemotaxis) (68), conditioned substrates (haptotaxis) (9), substrate stiffness gradients (durotaxis) (10), and electrical potential (galvanotaxis) (11, 12).

Cells can cooperate to sense gradients—but the physical principles limiting a cluster’s sensing accuracy are not settled. For single cells, the fundamental bounds on sensing chemical concentrations and gradients are well studied (1323), showing unavoidable stochasticity in receptor–ligand binding limits chemotactic accuracy. Is this true for cell clusters? Is a cell cluster simply equivalent to a larger cell? The answer is no! There is an essential difference between many clustered cells and a single large cell: Even clonal populations of cells can have highly variable responses to signals, due to many factors, including intrinsic variations in regulatory protein concentrations (2426). These cell-to-cell variations (CCVs) can be persistent over timescales much larger than the typical motility timescale of the cell (26). CCV has not been addressed in models of collective chemotaxis and it is not clear whether collective gradient sensing is limited by CCV or by stochastic receptor–ligand binding (7, 8, 2733).

Using a combination of analytics and simulations, we show that unless CCV is tightly controlled, collective guidance of a cluster of cells is limited by these variations: Gradient sensing is biased toward cells with intrinsically strong responses. This bias swamps the effects of stochastic ligand–receptor binding. Cell clusters may reduce this error by time averaging their gradient measurements only if the cells rearrange their positions, creating an unavoidable link between the mechanics of the cell cluster and its gradient-sensing ability. As a result, surprising new tradeoffs arise: Clusters must balance using motility to follow a biased signal with using motility to reduce error and compromise between reducing noise and increasing cluster fluidity.

Gradient-Sensing Error Is Dominated by Cell-to-Cell Variation, Not Receptor Noise

We study a 2D model of gradient sensing with CCV and ligand–receptor dynamics where cells sense a chemoattractant with concentration gradient 𝐠. Each cell at position 𝐫 measures local concentration, c(𝐫)=c0(1+𝐠𝐫), via ligand–receptor binding, which is stochastic. This noise leads to unavoidable errors in the cluster’s estimate of 𝐠. In addition, even if concentration is perfectly sensed, each cell responds differently to a fixed c, which models known CCV in signal response (34, 35). As a result, when the cluster combines measurements from its cells, it may develop a drift in the direction of stronger-responding cells (Fig. 1). To combine these effects, we specify the “measured” signal in cell i, Mi, which is what the cluster believes the chemoattractant signal in cell i to be, including ligand–receptor binding and CCV,

Mi=[c(𝐫i)+δciηi]/c¯+Δi, [1]

where c¯ is the mean concentration over the cluster, c¯=N1ic(𝐫i), ηi are uncorrelated Gaussian noises with zero mean and unit variance, and Δi are uncorrelated Gaussian noises with zero mean and variance σΔ2. Stochastic fluctuations in ligand–receptor binding are taken into account in the term δci, where (δci/c(𝐫i))2=1nr(ci+KD)2ciKD. This is the error in concentration sensing from a single snapshot of nr receptors with simple ligand–receptor kinetics and dissociation constant KD (ref. 14 and Review of Concentration Sensing Accuracy). Eq. 1 assumes that cell–cell variance additively corrupts the measurement of the concentration c(𝐫) after an adaptation to the overall level of signal across the cluster c¯. This is natural if the primary cell-to-cell variation is downstream of adaptation, as found to be a reasonable model in ref. 34. We expect similar results for CCV upstream of adaptation in certain limits (Cell-to-Cell Variation Upstream of Adaptation). We have also assumed that the CCV Δi is uncorrelated between different cells; this is a useful initial model describing large variations in protein levels that remain localized within each cell. Extensions of the model could potentially address correlations arising from, e.g., extracellular vesicle transport or cell division, where daughter cells’ Δi may be correlated.

Fig. 1.

Fig. 1.

Cell-to-cell variation creates systematic biases that can be significantly larger than the effects of receptor–ligand binding. (A) Schematic of how cell-to-cell variation can create bias in gradient sensing toward high-signaling and away from low-signaling cells. (B) Gradient-sensing error σ𝐠2=|𝐠^𝐠|2, derived from numerical maximum likelihood (symbols), is well approximated by Eq. 2 (dashed lines) at low gradient strengths. Symbols are plotted for four cluster sizes: N=7,19,37, and 61 cells (hexagonally packed clusters of unit spacing with Q=1,2,3,4 layers, illustrated in Computation of χ for Cells in Hexagonally Packed Cluster). In A–D, we use nr=105 and g=0.05, in units where the cell–cell spacing is 1. (C) Gradient-sensing error decreases as cluster size increases as σ𝐠2N2. In C, σΔ=0.23 and c¯=KD. (D) Strong CCV can mask concentration dependence of accuracy. In absence of CCV, gradient-sensing accuracy is maximized when c¯KD; this effect is screened when CCV dominates gradient sensing. D is shown for N=7 cells.

To determine gradient-sensing accuracy, we perform maximum-likelihood estimation (MLE) of 𝐠 in Eq. 1, as in past approaches for single-cell gradient sensing (16). We obtain the MLE 𝐠^ numerically (Materials and Methods and MLEs of Gradient Direction via Collective Guidance in the Presence of Cell–Cell Variation and Ligand–Receptor Noise) and thus the uncertainty σ𝐠2|𝐠^𝐠|2 (Fig. 1B, symbols), where is an average over CCV and ligand–receptor binding. For fixed and roughly circular (isotropic) cluster geometry, if the concentration change across the cluster is small, gRcluster1, σ𝐠2 can be approximated by assuming δci is constant across the cluster, resulting in

|𝐠^𝐠|22χ(σΔ2+1nr(c¯+KD)2c¯KD). [2]

Here, χ=12i|𝜹𝐫i|2 is a shape parameter, and 𝜹𝐫i=𝐫i𝐫cm is cell position relative to cluster center of mass. Evaluating this expression reveals that it is an excellent approximation to the numerically obtained uncertainty (dashed lines, Fig. 1B).

The approximate expression for the uncertainty, Eq. 2, allows us to quantify the relative contribution of receptor–ligand fluctuations and CCV to the gradient-sensing error. For background concentrations c¯ near the receptor–ligand equilibrium constant KD and for typical receptor numbers in eukaryotic cells [nr105 (36, 37)], δc/c¯ can be smaller than 0.01. Protein concentrations, on the other hand, often vary between cells to 10–60% of their mean (25)—hence we estimate σΔ0.10.6. Thus, we expect CCV to dominate gradient-sensing error and that the error from concentration sensing and receptor binding can be neglected completely if σΔ>0.1 (Fig. 1B). Eq. 2 also reveals that CCV masks the impact of changing background concentration. When σΔ=0, gradient sensing is limited by ligand–receptor fluctuations and increases as c¯ moves away from KD (Fig. 1D)—accuracy decreases if either few receptors are bound or receptors are saturated. As CCV increases, σ𝐠2 no longer depends strongly on c¯ (Fig. 1D). Finally, Eq. 2 shows that gradient-sensing accuracy depends on the shape parameter χ and, therefore, on cluster size. For hexagonally packed clusters of cells with unit spacing (we measure in units of the cell diameter; Materials and Methods), a cluster with Q layers has N=1+3Q+3Q2 cells and χ(Q)=(5/8)Q4+(5/4)Q3+(7/8)Q2+(1/4)Q (Computation of χ for Cells in Hexagonally Packed Cluster); i.e., χ(Q)Q4N2. Clusters of increasing size then have an error that decreases as 1/N2 (Fig. 1C); this scaling is similar to earlier results for single cells (Computation of χ for Cells in Hexagonally Packed Cluster).

Reducing Estimation Error by Time Averaging

If a cluster made n independent measurements, it could reduce σ𝐠2 by a factor of n. In single-cell gradient sensing, independent measurements can be made by averaging over time—improving errors by a factor T/τcorr, where T is the averaging time and τcorr the measurement correlation time. At first glimpse, time averaging seems unlikely to help with CCV, when correlation times for protein levels can be longer than cell division times, reaching 48 h in human cells (26). However, since gradient-sensing bias from CCV depends on the locations of strong- and weak-signaling cells within the cluster, time averaging can be successful if it is over a time long enough for the cluster to rearrange. This is true even if, as we initially assume, CCV biases Δi are time independent. We expect gradient sensing error with time averaging, σ𝐠,T2, will decrease by a factor of T/τr from σ𝐠,02, where τr is a correlation time related to cell positions (Fig. 2). Is this true, and how should we define τr?

Fig. 2.

Fig. 2.

Time averaging links fluidity and accuracy. (A) Schematic drawing of how cell–cell rearrangement can change bias due to CCV. Shades of gray indicate measured signal M; a cell with strong response (marked with X) moves through the cluster, leading to biases in gradient estimate (blue arrow). The characteristic relaxation time for this bias is τr (main text). (B) This leads to a link between the timescale τr, which is a measure of the cluster’s rheology, and chemotactic accuracy σ𝐠,T (box). (C) Different rearrangement mechanisms will depend on cluster size in different ways (main text and Characteristic Timescales of Different Rearrangement Mechanisms).

Our earlier results suggest that CCV dominates the gradient-sensing error. Ligand–receptor noise will also be even less relevant in the presence of time averaging, as the receptor relaxation time [seconds to minutes (38)] is much faster than that for cluster rearrangement (tens of minutes or longer). We therefore completely neglect ligand–receptor binding fluctuations, allowing an analytical solution for the MLE 𝐠^ (Materials and Methods and MLEs of Gradient Direction via Collective Guidance in the Presence of Cell–Cell Variation and Ligand–Receptor Noise).

How much does time averaging reduce error? If we average the MLE 𝐠^ over a time T by applying a kernel KT(t), i.e., we define 𝐠^T(t)𝐠^(t)KT(tt)dt and σ𝐠,T2|𝐠^T𝐠|2, we can derive (Detailed Derivation of Time-Averaged Gradient-Sensing Error)

σ𝐠,T2=σ𝐠,02×dω2π|KT(ω)|2Crr(ω), [3]

where Crr(tt)𝜹𝐫(t)𝜹𝐫(t)/|𝜹𝐫|2 is the normalized cell position–position correlation function, Crr(ω) is its Fourier transform, and σ𝐠,02=2σΔ2/χ is the error in the absence of time averaging. To derive Eq. 3, we make two approximations: (i) The cluster has a constant and isotropic shape and (ii) rearrangement of cell positions relative to the center of mass is independent of the particular values of Δ. The first approximation is not necessary, but is a useful simplification; a generalized result is given in Detailed Derivation of Time-Averaged Gradient-Sensing Error. The second approximation assumes that averaging over CCV and averaging over cell positions are independent. This decoupling approximation is necessary to characterize cluster fluidity and mechanics separately from the details of signaling. It excludes, e.g., models where cells with larger-than-average Δ sort out from the cluster. We discuss potential errors due to this approximation later in this paper.

For exponential position–position correlation functions and averaging, Crr(t)=exp(t/τr) and KT(t)=θ(t)1Tet/T, where θ(t) is the Heaviside step function, Eq. 3 is simple:

σ𝐠,T2=σ𝐠,021+T/τr. [4]

In other words, gradient-sensing accuracy can be improved by taking T/τr independent measurements in a time T. [The assumption of exponential averaging here is not crucial, and many averaging functions can be used in Eq. 3. We choose this average because it can be computed easily by a combination of accumulation and decay; i.e., t𝐠^T=T1(𝐠^T𝐠^).]

Crucial in this reduction is the position–position correlation time τr which depends on the cluster rearrangement mechanism. Two natural mechanisms are persistent cluster rotation and neighbor rearrangements within the cluster (Fig. 2C). These mechanisms may coexist, as when cells slide past one another during cluster rotation (39). τr can depend on cluster size; for diffusive rearrangements, we expect τrR2/Deff, and for persistently rotating clusters, τrR/vcell (Characteristic Timescales of Different Rearrangement Mechanisms).

We have assumed that the CCV is time independent over our scale of interest—consistent with the long memory found in ref. 26. If Δ changes faster than the cluster rearranges, our results can be straightforwardly modified. Generalizations of Eqs. 3 and 4 to this case are provided in Detailed Derivation of Time-Averaged Gradient-Sensing Error.

Tradeoffs in Collective Accuracy and Motility: Cluster Rotation

Our central result (Eq. 3) shows that clusters can improve their chemotactic accuracy by changing cell positions. The simplest mechanism to do this is cluster rotation, which occurs in border cell clusters (40) and transiently in leukocyte clusters (7). When should a cluster actively rotate to increase its accuracy? Rotation creates an important tradeoff: More work must be put into rotating and therefore less into crawling up the gradient. [We note that this is most relevant if motility is a large portion of the cluster’s energy budget, a complex question that may be cell-type dependent (4143).]

For constant work of motility, the maximum speed of a cluster of radius R that rotates with angular speed Ω is (Materials and Methods)

v(Ω)=vmax112Ω2τrot2, [5]

where τrot=R/vmax and vmax the maximum cluster speed absent rotation. The cluster cannot rotate faster than Ωmax=2/τrot.

If a cluster follows its best estimate 𝐠^T with speed v(Ω) given by Eq. 5, it can improve its velocity in the gradient direction by rotating when the averaging time T is long compared with τrot (Fig. 3A). (The cluster’s directionality is always improved by rotating, so there is no tradeoff unless speed of motion matters.) We find that the optimal rotation speed Ω that maximizes the up-gradient speed depends only on the signal-to-noise ratio (SNR) without rotation, SNR012g2/σ𝐠,02 and T/τrot (Fig. 3B and Materials and Methods). Mammalian cells have speeds in the range of micrometers per minute and radii of tens of micrometers, so to benefit from averaging (Tτrot), T must be longer than tens of minutes. The timescale τrot and SNR0 both depend on cluster size—larger clusters with more cells are both better gradient sensors and more difficult to drive to large angular speeds. As a consequence, the optimal Ω is highly cluster-size dependent: As cluster size decreases, there is a continuous transition to nonzero optimal Ω if T is sufficiently long (Fig. 3C).

Fig. 3.

Fig. 3.

Cluster rotation can improve directed cluster motility. (A) As the averaging time T is increased above the characteristic rotational timescale τrot=R/vmax, the mean cluster velocity in the gradient direction vx is maximized for nonzero rotational speed. SNR0=1 in A. ω=Ωτrot is the unitless rotational speed. (B) Rotation improves chemotaxis at long averaging times T and low SNR0 (bad gradient sensing in the absence of rotation). Color map shows the value of ω that maximizes vx, found by numerical evaluation; black line shows the ω0 contour. (C) Cluster rotation is preferred at small cluster radii. In this graph, SNR0 is estimated by using χπ4ρcR4, where ρc3.2×103μm2 is the number of cells per unit area in the cluster (Materials and Methods).

Linking Chemotactic Accuracy and Fluidity

Clusters with more cell rearrangement are more accurate by Eq. 4. To further quantify the consequences of cell rearrangements, we model a cluster of cells as self-propelled particles that follow the cluster estimate 𝐠^T with a noise characterized by angular diffusion Dψ and with cell–cell connections modeled as springs of strength κ between Delaunay neighbors (Materials and Methods). We emphasize that the angular diffusion parameterized by Dψ is an additional source of noise: As Dψ increases, cells are less accurate in following the cluster’s estimate of the gradient. These two parameters are systematically varied to study the effects of cluster fluidity on chemotactic accuracy.

Cluster Fluidity Improves Cluster Chemotaxis.

Within our model, increasing cell–cell adhesion κ makes clusters more ordered, moving between fluid-like and crystalline states (Fig. 4A). As a consequence, rearrangement slows significantly (Fig. 4C) with τrexp(κ/2) [Crr(t) is single exponential].

Fig. 4.

Fig. 4.

Cluster fluidity increases cluster accuracy. (A) Typical configurations of cell clusters (plotted from simulations with T=0.2). Color indicates measured signal Mi, lines connect neighboring cells, and the arrows indicate the polarity 𝐩. (B) When time averaging is significant, chemotactic index of clusters decreases as cell–cell adhesion stiffness is increased; this behavior is captured by the upper bound computed using Eq. 3. (C) Positional relaxation time τr increases with stiffness κ roughly as τreκ/2; τr does not strongly depend on averaging time T. (D) Cluster size parameter χ is not strongly dependent on κ in this range of κ. All plots are computed by averaging over 600 simulations of N=50 cells, each composed of 2×104 time steps with Δt=0.02. σΔ=0.3, Dψ=1, τ=1, =1, and g=0.025. The first 2×max(τ,T) time units of the simulation are discarded, to allow the system to reach a steady state. Error bars indicate 68% CIs.

Cluster structure and size change when clusters fluidize (Fig. 4A), which may in principle affect the shape parameter χ, which also strongly affects the chemotactic accuracy (Eq. 2). However, in our simulations χ is not significantly dependent on κ, changing by under 10% (Fig. 4D). Averaging time T also has only a weak effect on cluster shape and dynamics—changes in τr and χ when the averaging time T is increased by orders of magnitude are small (Fig. 4). This is consistent with our assumption decoupling the gradient estimate and cell rearrangements, suggesting clusters should obey the bound [3].

We can, using the results in Reducing Estimation Error by Time Averaging, predict the cluster chemotactic index, CIVx/|𝐕|, where 𝐕 is the cluster velocity. Assuming 𝐕𝐠^T, we can compute the CI from σ𝐠,T given by Eq. 4 (Materials and Methods). This requires parameters τr and χ (measured from simulations) and 𝐠, T, and σΔ (known). We note that our approach, which extracts τr and χ from cell trajectories, could also be applied to experimental data; in that case, 𝐠 would still be known, but the extent of time averaging (T) and the error due to CCV (σΔ) would have to be determined by fitting to the data. This prediction should be an upper bound to the measured CI, because our model includes additional noise beyond the assumptions of Eq. 4, via Dψ. As expected, the cluster CI decreases significantly as clusters solidify and the relaxation time τr increases. The simulation data qualitatively follow the predicted upper bound (Fig. 4B). When the averaging time T is reduced below typical relaxation times, the CI significantly decreases. In addition, for this short time averaging, changing cluster stiffness no longer strongly affects the CI.

Our model describes cell–cell adhesion by controlling the stiffness of springs connecting circular cells. Within this scheme, increasing adhesion reduces cluster fluidity; other models and experiments have suggested adhesion increases jamming and decreases rearrangement (44). However, descriptions of epithelial sheets using models that resolve cell shape, including vertex and cellular Potts models, suggest that increasing adhesion actually promotes a more fluid state (4548). With this in mind, whether adhesion increases or decreases cluster fluidity may be an open question. We use adhesion in our model as a simple control knob to adjust cluster fluidity; our results in Eq. 4 do not depend on the origin of the tissue’s fluidity, only on its characteristic relaxation time τr.

Increasing the Stochasticity of Single-Cell Motility Can Increase Cluster Accuracy.

Any mechanism that fluidizes the cluster can decrease the correlation time τr. Because of this, increasing motility noise can improve cluster chemotactic accuracy (Fig. 5). We increase single-cell angular noise Dψ and see an initial sharp increase in cluster CI as Dψ>0 (Fig. 5B). At larger values of Dψ, cluster CI decreases below the bound set by Eq. 4, as the additional noise added degrades the gradient-following behavior. Without significant time averaging (T=0.2), additional noise primarily impedes chemotactic accuracy.

Fig. 5.

Fig. 5.

Finite levels of stochasticity in single-cell motility increase accuracy. (A) Typical configurations of cell clusters (plotted from simulations with T=100). Color indicates measured signal Mi, lines connect neighboring cells, and the arrows indicate the polarity 𝐩. (B) When time averaging is significant, the CI of clusters first increases as increasing single-cell noise Dψ fluidizes the cluster and then falls below the upper bound computed using Eq. 3. We also plot an extended theory not assuming cluster isotropy, derived in Detailed Derivation of Time-Averaged Gradient-Sensing Error. Simulations for small Dψ may slightly exceed the upper bound (main text). (C) Positional relaxation time τr first decreases and then increases as Dψ is increased; the point Dψ=0, which has τr effectively infinite, is not shown. τr does not strongly depend on averaging time T. (D) Cluster size parameter χ weakly depends on fluidization by Dψ. All plots are computed by averaging over 600 simulations of N=50 cells, each composed of 2×104 time steps with Δt=0.02. σΔ=0.3, κ=1, τ=1, =1, and g=0.025. The first 2×max(τ,T) time units of the simulation are discarded, to allow the system to reach a steady state. Error bars indicate 68% CIs.

Why can extra noise Dψ help sensing? For Dψ=0, all cells follow the best estimate 𝐠^T precisely, leading to an ordered cluster (Fig. 5A) with τr effectively infinite. As Dψ is increased, the cluster fluidizes, and the relaxation time decreases strongly (Fig. 5C), resulting in more independent measurements. As in Fig. 4, this fluidization is relevant only if the averaging time T exceeds the relaxation time, so when T=0.2, the effect of increasing Dψ is solely detrimental to chemotaxis.

In deriving our bound, we made two key approximations: cluster isotropy and decoupling. These approximations are exact for the rigid cluster rotation in Tradeoffs in Collective Accuracy and Motility: Cluster Rotation, but only approximate for this self-propelled particle model. As a consequence, at small Dψ, simulated clusters have chemotactic indexes slightly exceeding our predictions (Fig. 5B). This error likely arises from emergent couplings between cluster shape and Δi—clusters may spread perpendicular to 𝐠^T, weakening the decoupling approximation (Fig. 5A). The approximation of cluster isotropy can be removed (Detailed Derivation of Time-Averaged Gradient-Sensing Error) and does not resolve the violation of the bound (Fig. 5B). Despite this potential error source, the model captures CI variation over a broad range of parameters (Bounds Capture Variation of CI over a Large Range of Parameters).

Discussion

Our study results in several predictions and suggestions for experiments that investigate collective chemotaxis. For example, we predict that, when CCV is large, gradient-sensing error is insensitive to background concentration (Fig. 1C). This is consistent with recent measurements on developing organoids that show that the up-gradient bias is not strongly dependent on mean concentration (8), although in contrast with results on lymphocyte clusters (7). Furthermore, if CCV limits collective chemotaxis, clusters that gradient sense in vivo should have tightly regulated expression of proteins relevant to the signal response. Interestingly, measurements of zebrafish posterior lateral line primordium (49) show tightly controlled Sdf1 signaling, measured by Cxcr4b internalization, suggesting that CCV may be small enough to allow for accurate collective gradient sensing.

We also show that there is a direct link between fluidity and chemotaxis as illustrated by Eq. 3. Verifying this expression in experiments requires simultaneous measurement of several quantities, including cluster size, cluster rearrangement, and signal gradient. Therefore, care has to be taken when modifying experimental conditions as these might change many key quantities simultaneously. Altering adhesion, for example, changes both cluster fluidity and spreading as shown in a recent study using neural crest clusters (50), creating a confounding factor. Nevertheless, these types of experiments may be successful in setting bounds on possible time averaging and the link between fluidity and chemotaxis. In principle, given detailed cell position tracks, our analysis could be performed on experimental data. However, there are significant technical details to be worked out. In comparing theory and simulation, we have full tracks of every cell in the cluster over every time point, allowing simple computations; experimental data, however, may have only transient or partial tracks or show clusters that fragment or merge. Critical in this comparison will be assessing potential sources of bias from missing data or including more complex cluster dynamics.

Our results suggest that many recent experiments may need reinterpretation. Measured chemotactic accuracies can depend on cluster size (6, 7, 31); these results have been modeled without time averaging or CCV (7, 27, 28, 31). Our results show that rearrangement times τr also influence chemotaxis—and that τr depends on cluster size. Cluster relaxation dynamics are therefore an unexplored potential issue for interpreting collective gradient-sensing experiments.

Essential in the reduction of gradient-sensing errors due to CCV is the existence of a biochemical or mechanical memory that can perform a time average over tens of minutes. There are several possibilities. First, memory could be external to the cluster—e.g., stored in extracellular matrix structure or a long-lived trail (51). Second, supracellular structures like actin cables influence cell protrusion and leader cell formation (52), suggesting that collective directional memory could be kept by regulating actin cable formation and maintenance. Third, memory may be kept at the individual cell level by cells attempting to estimate their own bias level Δi and compensating for it. This contrasts with our straightforward average of the collective estimate 𝐠^, but could be an important alternative mechanism.

Our model states that the cluster can take its information about signal levels, modulated only by CCV and ligand–receptor noise, and make the optimal computation of the gradient estimator 𝐠^. We do not explicitly identify a biochemical or mechanical mechanism by which the cluster can compute this estimate. However, at least in the limit where receptor noise is negligible and 𝐠^=(χ1)iMi𝜹𝐫i, the estimate depends simply on the cluster geometry. To compute 𝐠^, the cluster would have to be able to estimate only the cell location relative to the cluster center of mass 𝜹𝐫i; this could potentially be done by secreting and sensing a signal. Other possibilities could include generalizing the tug-of-war scheme proposed in ref. 27 so that cells farther away from the cluster center exert larger forces. We also note that, even if cell clusters use a different estimator than the optimal MLE 𝐠^ we have described here [e.g., estimators derived from local excitation, global inhibition (LEGI), or tug-of-war models (7, 27, 28, 30)], similar qualitative results will hold: Relaxation of any position-dependent estimator 𝐠^ will be faster if the cluster is more fluid.

We have so far addressed gradient sensing in only two dimensions. In higher dimensions, we expect some aspects of our results to be relatively unchanged; for instance, Eq. 2 will change only by a prefactor, and the results of Eq. 3 straightforwardly generalize to three dimensions. However, the scaling laws that determine how the shape factor χ changes with cluster size and the relaxation times τr change with cluster size will naturally differ in three dimensions. For instance, we would expect χi|𝜹𝐫i|2Rcluster5N5/3.

Our results are critical for understanding the ubiquitous phenomenon of collective gradient sensing. The importance of CCV provides a valuable design principle: CCV must either be tightly controlled or be mitigated by time averaging. We also established a surprising link between a central mechanical property of a cluster—its rheology—and its sensing ability. This connects mechanical transitions like unjamming (47) to sensing, opening up more areas of study. In addition, our results show cluster accuracy depends strongly on cluster rearrangement mechanism. Finally, our results show that noise in cell motility can be beneficial for collective sensing.

Materials and Methods

MLE of Gradient Direction in the Presence of Cell–Cell Variation and Ligand–Receptor Noise.

We compute the MLE of gradient direction given the measured signal at cell i, Mi, given by Eq. 1. If the cluster of cells is in a shallow linear gradient, with concentration c0 at the cluster’s center of mass 𝐫cm=N1i𝐫i, then c(𝐫)=c0[1+𝐠(𝐫𝐫cm)] and thus c¯=c0. Mi is then Mi=1+𝐠𝜹𝐫i+(δci/c0)ηi+Δi with 𝜹𝐫i=𝐫𝐫cm and (δci/ci)2=1nr(ci+KD)2ciKD; i.e., (δci/c0)2=1nr(1+𝐠𝜹𝐫i+KD/c0)21+𝐠𝜹𝐫iKD/c0.

Δi are uncorrelated between cells, with a Gaussian distribution of zero mean and SD σΔ; i.e., ΔiΔj=σΔ2δij with δij the Kronecker delta function. As ηi and Δi are both Gaussian, the sum of these variables is also Gaussian, and the likelihood of observing a configuration of measured signals {Mi} is L(𝐠;{Mi})=P({Mi}|𝐠), where P({Mi}|𝐠) is the probability density function of observing the configuration {Mi} given parameters 𝐠. The likelihood is

L(𝐠;{Mi})=i12πhiexp[(Miμi)22hi], [6]

where μi=1+𝐠𝜹𝐫i is the mean value of Mi and hi=(δci/c0)2+σΔ2 is its variance. We want to apply the method of maximum likelihood by finding the gradient parameters 𝐠^ that maximize this likelihood; i.e.,

𝐠^=argmax𝐠L(𝐠;{Mi}). [7]

However, because of the complex dependence of hi on the gradient 𝐠, this is not possible analytically. We perform this optimization numerically, using a Nelder–Mead method (Matlab’s fminsearch), with an initial guess set by the maximum for nr (i.e., neglecting concentration-sensing noise), which can be found exactly. For numerical convenience, we maximize the log-likelihood lnL(𝐠;{Mi}), lnL(𝐠;{Mi})=12ilnhii(Miμi)22hi up to an additive constant.

In the limit of nr (neglecting concentration noise), our model becomes a simple linear regression, and the log likelihood can be maximized analytically by finding 𝐠^ such that 𝐠lnL(𝐠;{Mi})|𝐠^=0 (MLEs of Gradient Direction via Collective Guidance in the Presence of Cell–Cell Variation and Ligand–Receptor Noise). The result is 𝐠^=A1iMi𝜹𝐫i, where Aαβiδrαiδrβi. This estimator is simplest in the limit of roughly circular (isotropic) clusters, where i(δxi)2i(δyi)2iδxiδyi. In this case, 𝐠^=(χ1)iMi𝜹𝐫i, where χ=12i|𝜹𝐫i|2.

Cluster Rotation Dynamics.

How much speed does a cluster lose by rotating? One possibility is to assume the power expended in generating motility is constant. Consider a circular cluster propelling itself over a surface, with the cells having velocity 𝐯(𝐫); we expect that the frictional force per unit area between the cluster and substrate will be 𝐟drag=ξ𝐯, where ξ is a friction coefficient with the substrate. If all of the power available for motility is going into driving the cluster over the substrate, then we can write P=d2r𝐯𝐟drag=ξd2r|𝐯|2. If the cluster is traveling as a rigid, circular cluster with its maximum possible velocity, 𝐯=vmax𝐱^, then P=ξπR2vmax2γtvmax2, where γt=ξπR2 is the translational drag coefficient of the cluster. If, instead, the cluster puts its entire power into rigid-body rotation with 𝐯(𝐫)=Ωmaxr(sinθ,cosθ) (in polar coordinates), then P=ξΩmax2d2rr2=ξπ2R4Ωmax2γrΩmax2, where γr=ξπ2R4 is the rotational drag coefficient of the cluster. In general, the power dissipated if the cluster is moving rigidly with velocity 𝐯 and angular speed Ω is P=γtv2+γrΩ2 and hence we find that the speed v(Ω) that a cluster rotating with angular velocity Ω is able to travel to obtain is

v(Ω)=vmax2γrγtΩ2. [8]

This quantifies one reasonable tradeoff between speed and angular velocity for a cluster. If the power available for cell motility is a small amount of the cell’s energy budget (4143), other tradeoffs may be more important and additional modeling will be necessary.

We consider a circular cluster traveling toward its best estimate of the gradient with speed v(Ω) given by Eq. 8 and traveling in the direction of the estimator 𝐠^T. We can then determine when the cluster maximizes its mean velocity in the direction of the increasing gradient, which we choose to be x, vx, as a function of Ω. This average is

vx=vmax2γrγtΩ2×𝐠^T,x|𝐠^T|. [9]

We know from our results above and in Detailed Derivation of Time-Averaged Gradient-Sensing Error that, for a fixed configuration, 𝐠^T has a Gaussian distribution with mean 𝐠=g𝐱^ and variance given by Eq. 3. The average of 𝐠^T,x|𝐠^T| depends only on SNRT12(g2/σ𝐠,T2), with 𝐠^T,x|𝐠^T|=C(SNRT1/2) (Computing Chemotactic Indexes, below).

Given the angular velocity Ω, we can work out the distribution of 𝐠^T by Eq. 3. We know 𝐫(t)𝐫(0)=|𝐫(0)|2cosΩt, and hence Crr(t)=cosΩt and its Fourier transform Crr(ω)=π[δ(ωΩ)+δ(ω+Ω)], and thus σ𝐠,T2=σ𝐠,02×|KT(Ω)|2=σ𝐠,02/(1+Ω2T2).

By rescaling to unitless parameters, we then find that

vx/vmax=112ω2×C([SNR0(1+ω2T2)]1/2), [10]

where ω=ΩR/vmax is the unitless angular velocity, SNR0=σΔ2g2χ is the usual SNR with no averaging, T=Tvmax/R is the ratio of the averaging time to the characteristic rotational time R/vmax, and C(σ) is the function given by Eq. 18. When SNR0 is sufficiently small and T sufficiently large, vx/vmax has a maximum at finite ω (Fig. 3).

In the limit of low SNR, C(σ)π/8σ1, and we find vx/vmax is maximized by ω=±112T2 when T>1/2 and ω=0 otherwise. For the large SNR limit, C(σ)1σ2/2 and rotation will increase the mean velocity in the direction of the gradient when T2>SNR0/21/4. More generally, it is possible to find the value of ω that maximizes vx numerically. We show the complete phase diagram in Fig. 3B.

Particle-Based Model of Collective Cell Migration.

We use a minimal model of collective cell migration, describing cells as self-propelled particles connected by springs,

ddt𝐫i=𝐩i+ji𝐅ij [11]
𝐩i=(cosθi,sinθi) [12]
θi=arctan(g^T,y/g^T,x)+ψi [13]
ddtψi=τ1sinψi+2Dψξi(t), [14]

where ξi(t) is a Gaussian Langevin noise with zero mean and ξi(t)ξj(t)=δijδ(tt), with δij the Kronecker delta. In this model, the orientation of an individual cell θi is the cluster’s best estimate of the gradient direction, arctan(g^T,y/g^T,x), plus a noise ψi which varies from cell to cell. τ here controls the persistence of this noise and Dψ its amplitude; when Dψ is increased, each individual cell is worse at following the estimate 𝐠^T. The cell–cell forces are

𝐅ij=κ(|dij|)𝐫^ij, [15]

where dij=|𝐫i𝐫j| and 𝐫^ij=(𝐫i𝐫j)/dij. The forces are only between neighboring cells ji, where we define neighboring cells as any cells connected by the Delaunay triangulation of the cell centers (Fig. 4A); this approach resembles that of ref. 53. We use the Euler–Maruyama method to integrate Eqs. 1114.

Simulation Units.

We have chosen our parameters in the simulation and throughout the paper to be measured in units where the equilibrium cell–cell separation =1 (i.e., the cell diameter is unity), and the velocity of a single cell in the absence of cell–cell forces 𝐯=𝐩=(cosθ,sinθ) has unit magnitude. For, e.g., neural crest cells, the cell diameters are of order 20 μm and the cell speeds on the order of micrometers per minute—so a unitless time of T corresponds to roughly 20min×T in real time. However, cell size and speed vary strongly from cell type to cell type, so we prefer to present these results in their unitless form so that they can be more easily converted.

Computing Chemotactic Indexes.

If we use the maximum-likelihood method to make an estimate for the direction in which the cell moves, how do we translate between the uncertainty σ𝐠2 and the distribution of velocities? We found that the MLE for the gradient is 𝐠^=𝐠+𝚲, with 𝚲 a Gaussian random variable with zero mean and variance Λx2=Λy2=σ𝐠2/2—and similar results for the time-average 𝐠^T. One measure of this estimate’s accuracy is the instantaneous chemotactic index—or the cosine of the angle between the estimate and the gradient direction. To compute this, if 𝐠=g𝐱^ without loss of generality, we find

𝐠^x|𝐠^|=g+Λx(g+Λx)2+Λy2 [16]
=dxdy2πσ1+x[(1+x)2+y2]1/2e(x2+y2)2σ2 [17]
C(σ), [18]

where σ=SNR1/2, with SNR=12(g2/σ𝐠2) (Fig. 6). These results carry over naturally to the time-averaged case if 𝐠^T remains Gaussian—we find 𝐠^T,x|𝐠^T|=C(SNRT1/2).

Fig. 6.

Fig. 6.

Relationship between instantaneous CI and SNR. C(σ) is plotted numerically from definition in Eq. 18.

The integral for C(σ) cannot be solved analytically, but we can find asymptotic forms for C(σ) or evaluate it numerically. For σ1, we find C(σ)π/8σ1, and C(σ)112σ2 for σ1.

Supplementary Material

Supplementary File
pnas.201712309SI.pdf (731.7KB, pdf)

Acknowledgments

We thank Albert Bae and Monica Skoge for useful discussions and many scientists from the Gordon Research Conference on Directed Cell Motility for interesting questions and reference suggestions. B.A.C. also thanks Kristen Flowers for several useful suggestions. This work was supported by NIH Grant P01 GM078586.

Footnotes

The authors declare no conflict of interest.

This article is a PNAS Direct Submission.

Data deposition: MATLAB simulation code for the MLE method, self-propelled particle simulations, and subsequent analysis as well as simulation output sufficient to reproduce the relevant figures is available online via the github repository: https://github.com/bcamley/celltocellreproduce.

This article contains supporting information online at www.pnas.org/lookup/suppl/doi:10.1073/pnas.1712309114/-/DCSupplemental.

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