Abstract
As observed during the 2013–2016 Ebola virus disease epidemic, containment of filovirus outbreaks is challenging and made more difficult by the lack of approved vaccine or therapeutic options. Marburg and Ravn viruses are highly virulent and cause severe and frequently lethal disease in humans. Monoclonal antibodies (mAbs) are a platform technology in wide use for autoimmune and oncology indications. Previously, we described human mAbs that can protect mice from lethal challenge with Marburg virus. We demonstrate that one of these mAbs, MR191-N, can confer a survival benefit of up to 100% to Marburg or Ravn virus–infected rhesus macaques when treatment is initiated up to 5 days post-inoculation. These findings extend the small but growing body of evidence that mAbs can impart therapeutic benefit during advanced stages of disease with highly virulent viruses and could be useful in epidemic settings.
INTRODUCTION
Within the Filoviridae family, Marburg marburgvirus contains two members, Marburg (MARV) and Ravn (RAVV) viruses. The viruses are transmitted by direct contact with blood, body fluids, and tissues of infected persons or animals [bats or nonhuman primates (NHPs)], and infection can result in high fever, headache, malaise, severe diarrhea, vomiting, and hemorrhagic symptoms. The mean case fatality rate of Marburg virus disease (MVD) outbreaks in humans since the first recognized outbreak in 1967 is about 80% (1). Concerns regarding natural outbreaks and weaponization of the virus (2) have made the development of medical countermeasures for MARV and RAVV high priorities.
Because of their high potency and specificity, as well as their clinical safety and efficacy record, monoclonal antibodies (mAbs) are an appealing platform technology for addressing the public health burden posed by viral infectious diseases such as MVD. With more than 45 mAbs approved by the U.S. Food and Drug Administration and European Medicines Agency (3), many of the manufacturing, formulation, and regulatory challenges of mAb drug development are well understood. The usefulness of antibodies, both naturally occurring and passively applied, has been evident for prevention and postexposure of viral infections for over a century (4, 5). However, it is only recently that evidence has accumulated for the efficacy of mAbs as therapeutics, even for highly virulent viral pathogens such as Nipah virus (6), Hendra virus (7), and Ebola virus (8, 9).
A variety of techniques have been used for therapeutic mAb discovery, including humanization of murine mAbs, phage display, and immunization of transgenic mice containing human immunoglobulin loci (10). One productive approach has been the isolation of human mAbs from survivors of infection (11–14), with an underlying rationale that naturally occurring mAbs obtained from human survivors are likely to have desirable safety and efficacy features based on B cell selection in vivo. We described previously a panel of human mAbs against the MARV glycoprotein (GP) generated from B cells of a survivor of MARV infection (15). All neutralizing mAbs from this panel bound to the same major antigenic site on the MARV GP (the receptor-binding site), and some were shown to cross-react with the RAVV GP. Here, down-selection of this panel of mAbs was performed using guinea pig models, and a lead therapeutic candidate was identified by efficacy testing in NHPs.
RESULTS
Pilot study in guinea pigs
Human mAbs against the MARV GP receptor-binding site have been observed to bind at three distinct angles of approach (15). Thus, three mAbs (MR78, MR82, and MR191), each representing a distinct binding angle, were selected for production in the Nicotiana benthamiana transient expression system (MR78-N, MR82-N, and MR191-N) (16) and subsequent testing in the lethal guinea pig–adapted (GPA) MARV and RAVV models (17–19). For initial screening, guinea pigs received an intraperitoneal injection of 1000 plaque-forming units (PFU) of GPA MARV. Two days post-inoculation (dpi), treated animals received a 10-mg intraperitoneal dose of mAb (or about 20 mg/kg). The dose used throughout these pilot studies was selected as a convenient dose consistent with dosing of the two mAbs approved by the U.S. Food and Drug Administration for infectious disease indications; palivizumab for respiratory syncytial virus is dosed at 15 mg/kg, and raxibacumab for anthrax is dosed at 40 mg/kg. MR82-N provided significantly less protection from death (P < 0.05 by Mantel-Cox test) than MR78-N or MR191-N, which each provided 100% protection (fig. S1A). Virus could not be detected in plasma sampled 7 dpi in animals treated with MR78-N or MR191-N (fig. S1B), whereas virus was detected in the plasma of the control animal and each of the animals treated with MR82-N.
Cross-protection study in guinea pigs
To evaluate cross-protective efficacy in vivo and to further define the therapeutic window, we next tested MR78-N and MR191-N in GPA MARV- or RAVV-inoculated animals with a single 10-mg intraperitoneal dose of mAb (~20 mg/kg) 4 dpi. Sixty percent of MARV-infected animals treated with MR78-N and 100% of animals treated with MR191-N survived (Fig. 1A); low levels of virus, about 1000-fold lower than controls, were detected in plasma 7 dpi in two MR78-N–treated animals (5 × 101 and 2.2 × 102 PFU/ml) and one MR191-N–treated animal (1 × 102 PFU/ml) (Fig. 1B). All animals had an elevated body temperature, and about half experienced weight loss by 4 dpi (Fig. 1, C and D), suggesting therapeutic rather than postexposure prophylactic efficacy by the mAbs. All GPA RAVV-inoculated animals treated 4 dpi with either mAb survived (Fig. 1E), with no detectable circulating virus 7 dpi (Fig. 1F). In contrast, both control animals succumbed by 10 dpi and had plasma viral loads of 1.3 × 105 or 1.4 × 105 PFU/ml.
Pilot study in NHPs
On the basis of these guinea pig data, MR191-N was selected for advancement to a MARV NHP pilot study. Considering that initiation of treatment 3 dpi was the latest that any drug candidate had been shown to protect MARV-inoculated NHPs (20), it was decided to initiate MR191-N dosing 4 dpi. Briefly, NHPs were inoculated with MARV and then either treated (n = 3) with MR191-N (50 mg/kg) intravenously 4 and 7 dpi (table S1; MARV Tx-1-3) or received no treatment (n = 1; table S1; MARV-1). All treated animals survived infection (Fig. 2A), whereas the control animal succumbed 8 dpi (P = 0.093 by Mantel-Cox test) and experienced severe clinical disease (Fig. 2, B and C, and table S1). Historical controls (20, 21) with this virus stock had a MTD of 7.9 ± 0.6 dpi (n = 10; P < 0.005 compared with treatment group by Mantel-Cox test). On the first day of treatment 4 dpi, all NHPs were viremic and had an elevated body temperature (Fig. 2D; average, +0.5°C; range, +0.3° to 0.8°C). Treatment was associated with a decline in viral load by 7 dpi with undetectable virus levels (limit of detection = 25 PFU/ml) by 10 dpi. In contrast, the viral load in the control animal increased to almost 108 PFU/ml by 8 dpi, the day the animal met clinical euthanasia criteria (Fig. 2B).
Cross-protection in NHPs
To further define the therapeutic window of MR191-N, we performed a cross-protection study with dosing initiated 5 dpi. Groups of five animals were inoculated with an otherwise lethal dose of either MARV (Fig. 3) or RAVV (Fig. 4) and treated with MR191-N intravenously (table S1;MARVTx-4-8andRAVVTx-1-5)5and8dpi.Adoseof50mg/kg was chosen on the basis of dosing used in previous filovirus immunotherapy studies in NHPs (9, 22). Eighty percent of MARV-infected (P < 0.05) and 100% of RAVV-infected (P < 0.05) NHPs survived, whereas the control animals succumbed on 8 dpi (MARV) or 10 dpi (RAVV). Compared to historical controls with the same viral stock, protection against MARV (P < 0.005; MTD of historical controls, 7.9 ± 0.6 dpi; n = 10) and RAVV [P < 0.01; MTD of historical controls (23) = 9.0 ± 1.7 dpi; n = 3] was highly significant (Figs. 3, A and B, and 4, A and B). On day 5, before mAb treatment, MARV-infected NHPs had viral titers ranging from 8.3 × 103 to 3.8 × 105 PFU/ml by plaque assay (Fig. 3C) and from 1.9 × 105 to 8.1 × 1010 genome equivalents (GEQ)/ml by reverse transcription quantitative polymerase chain reaction (RT-qPCR) (Fig. 3D), as well as elevated body temperatures (average, +0.8°C; range, +0.2° to 1.6°C; Fig. 3E). With the exception of MARV Tx-5, all MR191-N–treated animals had undetectable levels of circulating virus by plaque assay and RT-qPCR by 11 dpi. MARV Tx-5 experienced a drop in viral load by both assays and then experienced a viral rebound detected at 14 and 15 dpi when the animal met clinical euthanasia criteria. The gross pathology and immunohistochemistry after necropsy observed for this animal were consistent with disease caused by MARV (23), whereas tissues from MR191-N–treated animals exhibited no evidence of disease (fig. S2). To assess whether the viral rebound was due to an MR191-N escape mutant, we compared the neutralization activity of MR191-N on virus isolated 15 dpi from MARV Tx-5 with the neutralization activity against the original virus used to inoculate the animals. No difference was observed, suggesting that the rebound was not associated with the emergence of an MR191-N escape mutant (fig. S3). In addition, no evidence of escape was detected by deep sequencing the viral genomic RNA 15 dpi; only a small population of genomes with a silent mutation in the GP gene was detected (table S2).
Before mAb treatment, all RAVV-inoculated animals had viral loads of 2 × 102 to 3 × 104 PFU/ml by plaque assay 5 dpi (Fig. 4C) and 1 × 106 to 1.2 × 108 GEQ/ml by RT-qPCR (Fig. 4D), and five of six NHPs had an elevated body temperature (average, +0.5°C; range, +0.1° to 0.8°C; Fig. 4E). Virus was not detected in MR191-N–treated animals by plaque assay from 8 dpi and by RT-qPCR from 11 dpi to the end of the study. The RAVV-infected control NHP had a peak viral load of 5.2 × 106 PFU/ml and 4 × 1010 GEQ/ml on 8 dpi, the day the animal met clinical euthanasia criteria. The gross pathology and immunohistochemistry after necropsy observed for this animal were consistent with disease caused by RAVV (23), with no evidence of disease in treated animals (fig. S4).
The clinical data illustrate that mAb therapy, regardless of inoculated virus, reduced observed clinical illness compared to controls (table S1 and Fig. 3B). Nonetheless, MR191-N–treated NHPs had changes in hematology and blood chemistries indicative of MARV and RAVV infection, such as reduced lymphocyte counts and elevated liver enzymes. Unlike in the control animals, the clinical pathology changes resolved after MR191-N treatment resulted in reduced viral load, with the exception of MARV Tx-5.
DISCUSSION
After multiple reports of an absence of benefit from antibody administration to NHPs infected with filoviruses (24–26), a seminal study by Dye et al. demonstrated that antibodies in the form of a concentrated polyclonal antibody preparation could affect survival of infection with EBOV or MARV in NHPs when treatment was initiated up to 2 dpi (27). Here, this initial finding has been extended to the use of a single recombinant mAb capable of protecting NHPs against both MARV and RAVV when given as late as 5 dpi. MR191 neutralizes cell-free virus weakly, with a median inhibitory concentration of ~100 μg/ml for MARV (15) and >1000 μg/ml for RAVV (15). This disparity between potency in vitro and efficacy in vivo suggests either an artifact associated with the standard MARV and RAVV neutralization assays or that neutralization may only be one of the mechanisms of action by MR191. Most recombinant mAbs and antibodies produced in vivo are fucosylated; afucosylated mAbslike MR191-N have enhancedbinding to FcγRIII receptors compared to fucosylated mAbs, which can translate to enhanced antibody-dependent cellular cytotoxicity activity, theoretically increasing the ability of the mAb to facilitate killing of infected cells by the host immune system (28).
Although it is impossible to determine with certainty why MARV Tx-5 was the only MR191-N–treated NHP to succumb to infection, the data suggest that it was not due to selection of an escape mutant to the mAb. Notably, MARV Tx-5 had the highest viral load of any of the animals before treatment with mAb. Further, the serum concentration of MR191-N in MARV Tx-5 was 10- to 100-fold less than that in the other NHPs 8 dpi (50 μg/ml; before receiving the second dose) and 2- to 6-fold less 14 dpi (70 μg/ml). These findings, together with the observation of high viral loads in circulation (>107 PFU/ml and >1011 GEQ/ml) and reported in liver and spleen tissue (20) during the course of MARV infection, are consistent with the hypothesis that insufficient concentration of MR191-N was present in MARV Tx-5. The emergence and selection of escape mutant viruses during in vivo treatment are general concerns with mAb therapeutics, but the occurrence of these depend highly on the specifics of the mAb and its epitope, as well as the nature of the infectious agent. Cocktails of mAbs are a strategy to minimize the risk of escape mutants and are likely important for some indications, such as HIV immunotherapy, where the neutralizing epitopes have great diversity between viral clades. In other cases, one mAb may be sufficient; a single mAb has been shown to be an effective therapeutic in NHPs infected with Ebola virus (29), and the anti–respiratory syncytial virus neutralizing mAb palivizumab has been in widespread clinical use for over 15 years, with escape mutants having minimal clinical relevance (30). No evidence of escape mutants was detected in the single NHP (MARV Tx-5) that succumbed to infection; the conservation of the MR191 epitope among both members of M. marburgvirus suggests that it may be critical for viral fitness.
The work presented here has several limitations. The number of neutralizing human mAbs available for evaluation was limited, and, from that small number, resource constraints only allowed testing of three mAbs in vivo. Further studies may identify superior mAbs or combinations of mAbs. Measurement of viral load by plaque assay in these studies may be confounded by the presence of the neutralizing mAb in blood, which highlights the importance of testing by the orthogonal RT-qPCR method. Finally, pharmacology and toxicology testing, as well as manufacturing under Good Manufacturing Practices, will be required before MR191 can be tested clinically.
The 2013–2016 Ebola virus disease epidemic highlighted the troubling absence of prophylactic or therapeutic options for filoviruses. Without a clinically acceptable treatment, little incentive exists for infected individuals to report to a treatment unit. This dynamic makes it difficult to track and contain outbreaks because infected individuals continue to expose family and community members to the risk of transmission. Recently, promising results in the MARV NHP model with potential medical countermeasures have been reported, including 100% protection of MARV-infected NHPs treated with seven daily doses of lipid-encapsulated small interfering RNA (siRNA) starting up to 3 dpi (20). Additionally, daily dosing for 14 days with an antisense phosphorodiamidate morpholino oligomer (PMO) starting 4 dpi provided 83 to 100% protection to NHPs infected with MARV-Musoke, a putatively less virulent MARV isolate (1, 31). The results reported here represent a significant advance in that a single drug candidate, MR191-N, provided therapeutic benefit against both MARV and RAVV with only two doses initiated 5 dpi. The observation that all treated animals were viremic before dosing suggests that this time frame is a clinically realistic treatment window. Although siRNAs and PMOs are both promising new classes of experimental molecules, the safety of mAb therapy in humans is well documented, particularly for mAbs against nonself antigens. mAbs offer the ability to confer immediate and specific immunity in all populations, including the young, the elderly, and the immunocompromised. The evidence presented here suggests that MR191 is an effective pan-marburgvirus mAb and one of the most promising approaches in development for treating disease caused by MARV and RAVV.
MATERIALS AND METHODS
Study design
Guinea pigs were used to screen candidate MARV mAbs before assessment in NHPs (n = 5 guinea pigs per treatment group). A lead candidate mAb (MR191-N) was selected from the guinea pig studies for further evaluation in NHPs. Sixteen healthy adult rhesus macaques (Macaca mulatta) of Chinese origin (4 to 7 kg) were used to conduct three separate studies to test the therapeutic efficacy of MR191-N. The experimental design included an initial study of three treated animals and one control animal to assess the efficacy against MARV when treatment was initiated 4 days after exposure. The two subsequent studies assessed the efficacy of MR191-N using groups of n = 5 treated animals and n = 1 control animal when treatment was initiated beginning 5 days after either MARV or RAVV virus exposure. Historical controls were used to supplement treatment groups. Animals were randomized with Microsoft Excel into treatment or control groups. A number of parameters were monitored during the course of the study, including survival, clinical observations, hematology, serum biochemistry, viremia and viral load in tissues by RT-qPCR and plaque assay, and tissue pathology. The primary objective of the study was to assess survival rates, with all other measurements being considered secondary objectives. This study was not blinded. Primary data are included in table S3.
mAb production
mAbs [MR78 and MR82, human immunoglobulin G1 κ (IgG1κ); MR191, human IgG1λ] (15) used in guinea pig studies were produced in tobacco (N. benthamiana) at Mapp Biopharmaceutical Inc., as described previously (32). mAbs used in NHP experiments were manufactured in N. benthamiana by Kentucky BioProcessing, as described previously (8, 22). Consistent with previous findings (33–35), the mAb was >99% afucosylated, with GnGn being the predominant N-glycoform, and significant differences were not observed between the lots produced at the two sites.
Ethics statement
Both the guinea pig and NHP research were conducted in compliance with the Animal Welfare Act and other federal statutes and regulations relating to animals and experiments involving animals and adhered to principles stated in the eighth edition of the Guide for the Care and Use of Laboratory Animals (National Research Council, 2011). The facility where this research was conducted [University of Texas Medical Branch (UTMB)] is fully accredited by the Association for Assessment and Accreditation of Laboratory Animal Care International and has an approved Office of Laboratory Animal Welfare Assurance (#A3314-01). Conducting animal studies in biosafety level 4 (BSL-4) restricts the number of animal subjects, the volume of biological samples that can be obtained, and the ability to repeat assays independently and thus limits statistical analysis. Consequently, data are presented as means calculated from replicate samples, not replicate assays, and error bars represent SD across replicates.
Guinea pig studies
MARV mAbs were down-selected for use in NHPs using female outbred Hartley strain guinea pigs (~350 to 400 g; Charles River Laboratories) that were inoculated with about 1000 PFU of GPA MARV (Angola isolate) or GPA RAVV by intraperitoneal injection (18). Three MARV mAbs (MR82-N, MR78-N, and MR191-N) (15) were tested therapeutically using a 10-mg intraperitoneal dose of individual mAb at 2 dpi (n = 5 per antibody treatment) against GPA MARV inoculation, and two MARV mAbs, MR78-N and MR191-N, were tested at 4 dpi (n = 5 per antibody per virus) against GPA MARV or GPA RAVV inoculation. Animals were bled 7 dpi and observed for signs of disease, weight loss, temperature, and survival up to 28 dpi.
NHP studies
Sixteen healthy rhesus macaques (M. mulatta) of Chinese origin (4 to 7 kg) were used to evaluate MARV mAb MR191-N (50 mg/kg per dose) in three separate studies. In two studies, animals were inoculated by the intramuscular route with a target dose of 1000-PFU MARV Angola isolate Marburg virus H.sapiens-tc/ANG/2005/Angola {passage 2; Vero E6 [American Type Culture Collection (ATCC), CRL-1586]} and were treated either at 4 and 7 dpi (control, n = 1; treated, n = 3) or at 5 and 8 dpi (control, n = 1; treated, n = 5); actual inoculum has 1050 PFU for 4 or 7 dpi and 1240 PFU for 5 or 8 dpi studies. In a separate study, NHPs were inoculated with RAVV Ravn virus H.sapiens-tc/KEN/1987/Kitum Cave-810040 (passage 3; Vero E6), 1000-PFU intramuscular target dose (actual dose, 1100 PFU), and were treated at 5 and 8 dpi (control, n = 1; treated, n = 5). All animals were given physical exams, and blood was collected at the time of inoculation and on 4 or 5, 7 or 8, 10 or 11, 14, 21, and 28 dpi. In addition, all animals were monitored daily and scored for disease progression with an internal filovirus scoring protocol approved by the UTMB Institutional Animal Care and Use Committee. The scoring changes were measured from baseline for posture/activity level, attitude/behavior, food consumption (only the absence of food consumption is scored; incomplete consumption is noted as captured in table S1) and water intake, weight, respiration, and disease manifestations such as visible rash, hemorrhage, ecchymosis, or flushed skin. A set score of greater than 9 from combined signs was used to determine criteria for euthanasia.
MARV and RAVV seed stocks were deep-sequenced and compared to prototype isolates (GenBank #DQ447653 and #DQ447649) as described below. The challenge stocks were also tested for endotoxin in the preparations using the Endosafe–Portable Test System (PTS) (Charles River Laboratories). Virus preparations were diluted 1:10 in limulus amebocyte lysate (LAL) reagent water according to the manufacturer’s directions, and endotoxin levels were tested in LAL Endosafe-PTS cartridges as directed by the manufacturer; each result was below the limit of detection, whereas positive controls showed that the tests were valid. Challenge stocks were also tested for mycoplasma contamination using the e-Myco PLUS Mycoplasma Detection Kit (Boca Scientific), and the results were found to be below the limit of detection.
Detection of viremia by plaque assay
Virus titration was performed on Vero E6 (ATCC, CRL-1586) cell monolayer cultures using a plaque assay, as previously described (36). Briefly, increasing 10-fold dilutions of the samples were adsorbed to Vero E6 monolayers in duplicate wells (200 μl), and, after 7 to 9 days, neutral red staining was used to visualize plaques; the limit of detection was 25 PFU/ml.
Detection of viremia by RT-qPCR
RNA was isolated from whole blood using Viral RNA Mini Kit (Qiagen) with 100 μl of blood into 600 μl of buffer AVL. Primers/probe targeting the nucleoprotein gene of MARV were used for RT-qPCR, with the probe used here being 6-carboxyfluorescein–5′-CCCATAAGGTCACCCTCTT-3′-6-carboxytetramethylrhodamine (Life Technologies) (18). MARV RNA was detected using the CFX96 detection system (Bio-Rad Laboratories) in One-Step Probe RT-PCR kits (Qiagen) with the following cycle conditions: 50°C for 10 min, 95°C for 10 s, and 40 cycles of 95°C for 10 s and 59°C for 30 s. Threshold cycle values representing MARV genomes were analyzed with CFX Manager Software, and data are shown as number of GEQ per milliliter. To create the GEQ standard, RNA from MARV stocks was extracted, and the number of MARV genomes was calculated using Avogadro’s number and the molecular weight of the MARV genome.
Hematology and serum biochemistry
Total white blood cell counts, white blood cell differential counts, red blood cell counts, platelet counts, hematocrit values, total hemoglobin concentrations, mean cell volumes, mean corpuscular volumes, and mean corpuscular hemoglobin concentrations were analyzed from blood collected in tubes containing EDTA using a laser-based hematologic analyzer (Beckman Coulter). Serum samples were tested for concentrations of albumin, amylase, alanine aminotransferase, aspartate aminotransferase, alkaline phosphatase, γ-glutamyltransferase, glucose, cholesterol, total protein, total bilirubin, blood urea nitrogen, creatinine, and C-reactive protein by using a Piccolo point-of-care analyzer and BioChemistry Panel Plus analyzer discs (Abaxis).
Histopathology and immunohistochemistry
Necropsy was performed on all subjects. Tissue samples of all major organs were collected for histopathologic and immunohistochemical (IHC) examination, immersion-fixed in 10% neutral buffered formalin, and processed for histopathology, as previously described (20). For IHC examination, specific anti-MARV VP40 protein rabbit primary antibody (Integrated BioTherapeutics) was used to detect MARV antigen. The secondary antibody used was biotinylated goat anti-rabbit IgG (Vector Laboratories), and LSAB2 streptavidin–horseradish peroxidase (Dako) was used to visualize antigen. Tissue sections were processed using the Dako Autostainer. Slides were developed with Dako diaminobenzidine chromogen and counterstained with hematoxylin. Non-immune rabbit IgG primary antibody was used as a negative control.
MR191-N neutralization analysis for the presence of potential virus escape mutant
Briefly, Vero E6 cells were seeded into six-well plates to generate a confluent monolayer on the day of inoculation. Neutralization assays were performed with serial dilutions of MR191-N prepared in Dulbecco’s modified Eagle’s medium and incubated with ~100 PFU of MARV in a total volume of 200 μl at 37°C for 60 min; controls with no mAb were included (102 ± 8 PFU; n = 6). Medium was removed from cells, the mAb-virus mixture was added to duplicate wells, and plates were incubated for 60 min at 37°C. The mixture was removed from the cells, and 2 ml of 0.9% agarose in Eagle’s minimum essential medium with 5% fetal bovine serum was overlaid onto each of the wells. Cells were observed 5 to 7 dpi, and plaques were visualized and counted using neutral red stain.
Deep sequencing analysis of RNA genome of MARV seed stock and NHP isolate
To analyze the potential for MR191-N escape mutants, virus was isolated (Passage 1; Vero E6) from the 15-dpi sample of MARV Tx-5 and the original stock of MARV-Angola. Briefly, viral RNA was isolated from a TRIzol LS (Invitrogen)/sample mixture using a Direct-zol RNA MiniPrep (Zymo Research) according to the manufacturer’s instructions. About 150 ng of purified RNA was used to make complementary DNA using the Ovation RNA-Seq 2.0 kit (NuGEN), and this, in turn, was used for the preparation of the double-stranded DNA library, using the Encore Ion Torrent library prep kit. Sequencing was performed by the UTMB Molecular Core on the Ion Torrent using 318-v2 deep sequencing chips. Sequence analysis was performed using SeqMan NGen software (DNASTAR) on the basis of unpaired analysis of 125–base pair overlaps.
Statistical analysis
Mantel-Cox test was used for analysis of differences in survival.
Supplementary Material
Acknowledgments
We thank V. Klimyuk and Y. Gleba for access to the magnICON expression system, Kentucky BioProcessing for their assistance, the staff of the UTMB Animal Resources Center for animal husbandry, the UTMB Research Histopathology Core for assistance with tissue processing, and the UTMB Galveston National Laboratory Molecular Core for preparing and running deep sequencing libraries.
Funding: This work was supported by the Department of Health and Human Services and NIH grants AI082744 (to L.Z.), AI109762 (to L.Z.), U19AI109711 (to T.W.G. and J.E.C.), and UC7AI094660 for BSL-4 operations support of the Galveston National Laboratory.
Footnotes
Author contributions: C.E.M., J.E.C., L.Z., and T.W.G. designed the experiments. O.B., N.B., C.G., A.H., D.H.K., M.H.P., J.V., and K.J.W. manufactured, tested, and released the mAb. J.B.G. and D.J.D. performed the guinea pig studies. C.E.M., J.B.G., D.J.D., and T.W.G. performed the NHP experiments and conducted the clinical observations of the animals. J.B.G., V.B., and K.N.A. performed the clinical pathology assays. J.B.G. performed the MARV and RAVV infectivity assays. V.B. performed the MR191-N neutralization and escape mutant assays. K.A.F. performed histological and IHC analysis of the data. H.S., K.J.W., and L.Z. contributed the reagents for this study. A.I.F. and J.E.C. determined and provided the sequences for the antibodies. C.E.M., J.B.G., V.B., K.A.F., K.N.A., A.I.F., D.J.D., O.B., N.B., C.G., A.H., D.H.K., M.H.P., J.V., K.J.W., J.E.C., L.Z., and T.W.G. analyzed the data. C.E.M., L.Z., and T.W.G. wrote the manuscript.
Competing interests: K.J.W. and L.Z. are the owners of Mapp Biopharmaceutical Inc., which develops mAb-based drugs. A.I.F. and J.E.C. are co-inventors on a patent applied for that includes claims about the human antibodies described in this paper. All other authors declare that they have no competing interests.
Data and materials availability: Reagents described here are accessible via material transfer agreement with Mapp Biopharmaceutical Inc. or UTMB.
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