Table 2. Concordant regulated genes for both cell lines.

	Gene expression changes 3D vs 2D
	A549		Colo699
Gene	FDR	log2FC	FDR	log2FC
EFCAB4B	< 0.001	2,70	< 0.001	1,20
PDE3A	< 0.001	2,20	< 0.001	1,80
UNC13A	< 0.001	2,20	< 0.001	2,10
CEACAM1	< 0.001	1,30	< 0.001	2,50
PKDCC	< 0.001	1,20	< 0.001	2,40
AZGP1	< 0.001	2,00	< 0.001	2,10
FAM129A	< 0.001	−3,50	< 0.001	−1,50
RBM24	< 0.001	−2,70	< 0.001	−1,40
ZEB2	< 0.001	−2,50	< 0.001	−1,30
FOXM1	< 0.001	−2,30	< 0.001	−1,50
CDC20	< 0.001	−2,10	< 0.001	−1,70
FHOD3	< 0.001	−2,10	< 0.001	−1,90
JAG1	< 0.001	−2,10	< 0.001	−1,80
TNS1	< 0.001	−2,10	< 0.001	−2,60
CENPI	< 0.001	−1,60	< 0.001	−2,50
GPNMB	< 0.001	−2,00	< 0.001	−2,10
HAS2	< 0.001	−1,60	< 0.001	−2,00
GRIN2B	< 0.001	−1,50	< 0.001	−2,00

The table describes the concordant altered genes in both cell lines (A549 and Colo699) with at least a 2-fold change in expression within one cell line.

FDR is false discovery rate as used for the multiple testing correction of p-values according to the Benjamini Hochberg method; log2FC is log2 fold change.