Abstract
Anatomical connectivity and lesion studies reveal distinct functional heterogeneity along the dorsal-ventral axis of the hippocampus. The immediate early gene Arc is known to be involved in neural plasticity and memory and can be used as a marker for cell activity that occurs, for example, when hippocampal place cells fire. We report here, that Arc is expressed in a greater proportion of cells in dorsal CA1, CA3 and dentate gyrus (DG), following spatial behavioral experiences compared to ventral hippocampal subregions (dorsal CA1= 33%; ventral CA1= 13%; dorsal CA3 = 23%; ventral CA3 = 8%; and dorsal DG = 2.5%; ventral DG = 1.2%). The technique used here to obtain estimates of numbers of behavior-driven cells across the dorsal-ventral axis, however, corresponds quite well with samples from available single unit recording studies. Several explanations for the two-to-three-fold reduction in spatial behavior-driven cell activity in the ventral hippocampus can be offered. These include anatomical connectivity differences, differential gain of the self-motion signals that appear to alter the scale of place fields and the proportion of active cells, and possibly variations in the neuronal responses to non-spatial information within the hippocampus along its dorso-ventral axis.
Introduction
Early studies examining the behavioral effects of lesions to the dorsal versus ventral regions of the hippocampus suggested that these regions are functionally distinct (e.g., Kimura and Douglas, 1958; Hughes, 1965; Nadel, 1968). Studies since then have confirmed and extended these initial observations and suggest that there are both gradual and discrete transitions of functional organization across the long axis of the hippocampus (e.g., Fanselow and Dong, 2010; Small et al., 2011; Strange et al., 2014) that divide it into at least three separate domains. Lesions that are restricted to the dorsal hippocampus impair spatial memory in small environments (Moser et al., 1993; Moser et al., 1995), while ventral hippocampal lesions do not. It has been proposed that the most ventral region is more critical for emotional behavior and stress responses including contextual fear learning (Hunsaker et al., 2008; Bannerman et al., 2004).
Electrophysiological data are also consistent with the idea that the hippocampus does not function as a unitary, homogeneous structure with respect to its dorso-ventral axis (John and Killam, 1959; Hughes, 1965; Moser and Moser 1998; Strange et al., 2014). Recordings from neurons in the dorsal hippocampus have revealed that the firing of the principle cells in this structure is tuned to specific locations in the environment (O'Keefe and Dostrovsky, 1971), and this elevated activity has been called a “place field”. In the intermediate third to ventral pole region, fewer neurons are active during foraging and those that are responsive exhibit larger place fields (Jung et al., 1994; Maurer et al., 2005; Kjelstrup et al., 2008). Therefore, the ventral hippocampus may perform spatial functions similar to dorsal hippocampus but at a larger spatial scale. Consistent with the idea that the hippocampus can represent environments at multiple spatial scales, Kjelstrup et al. (2008) have shown that the relative size of place fields in area CA3 expands almost linearly from a scale of < 1 m in size near the dorsal hippocampal pole to ~ 10 m near the ventral pole.
There are also gradients in hippocampal-cortical-subcortical connectivity in rats along the dorso/ventral axis of the hippocampus (Amaral and Witter, 1989) consistent with the idea of gradated functional organization. For example, inputs from infralimbic and prelimbic cortices reach the ventral parts of the hippocampus via the ventromedial entorhinal cortex (EC), whereas, projections from the prelimbic cortex primarily influence the intermediate-dorso-ventral hippocampus via intermediate EC (Dolorfo and Amaral, 1998; Witter et al., 2000; Strien et al., 2009). The dorsal hippocampus receives visuo-spatial inputs from the dorsolateral entorhinal cortex (Swanson and Cowan, 1977), while the ventral hippocampus receives afferent projections from the ventromedial entorhinal cortex and subcortical inputs from hypothalamus and amygdala (Hargreaves et al., 2005). Therefore, cingulate areas involved in spatial processing (retrosplenial cortex) project to more dorsal regions and cingulate areas involved in emotional regulation (infralimbic and prelimbic) project primarily to ventral hippocampal regions, as do hypothalamic and amygdalar projections. Furthermore, neuromodulatory projections also show changes in density along the long axis, with stronger projections of monoamine systems to the ventral hippocampus (Strange et al., 2014).
The differences in gene transcription along the dorsal-ventral axis of the hippocampus also supports the notion of functional differentiation of this structure (Leonardo et al., 2006; Lein et al., 2007; Frisoni et al., 2008; Dong et al., 2009; Christensen et al., 2010). Using next- generation RNA sequencing it was revealed that there is a continuous gene-expression gradient resulting in prominent heterogeneity of CA1 pyramidal cells along the dorsal-ventral axis (Cembrowski et al., 2016). A handful of studies have compared gene expression differences in dorsal versus ventral hippocampal subregions, (Czerniawski et al., 2011) including in response to altered cognitive demands, which results in remapping in dorsal CA1 but not ventral CA1, (Schmidt et al., 2012) in response to fear conditioning (Czerniawski et al., 2011), in response to recent and remote spatial memory retrieval (Gusev et al., 2005) or following spatial versus non-spatial recognition memory tasks (Beer et al., 2014).
Based upon behavioral, anatomical and gene expression studies, Fanselow and Dong (2010) suggest that the hippocampus can be functionally segregated into 3 compartments along its longitudinal axis (Thompson et al., 2008; Dong et al., 2009): the dorsal region primarily performs functions associated with spatial exploration, navigation and locomotion, while the ventral compartment performs functions related to stress, emotion and affect. According to these authors, the intermediate zone has partly overlapping functions involved in translating cognitive and spatial information into motivation and survival behaviors.
The IEG Arc is rapidly induced following exploratory behaviors and has been widely used as a marker of neuronal activity (e.g., Guzowski et al., 1999; Guzowski et al., 2005; Kubik et al., 2007; Bramham et al., 2008; Miyashita et al., 2008). The proportions of cells that express Arc in the dorsal hippocampus, following spatial foraging tasks in environments of a size typically used in recording experiments (e.g., Muller and Kubie, 1987; Jeffery et al., 1997; Leutgeb et al., 2004; Rich et al., 2014; Witharana et al., 2016) is similar to the proportions of cells that express place fields. Furthermore, there are several experiments that suggest a lower proportion of active cells in the ventral hippocampus than in the dorsal region using both recording and gene expression methodology (Jung et al., 1994; Maurer et al., 2005; Kjelstrup et al., 2008).
The present study is the first to examine activity-induced gene expression in CA1, CA3 and dentate gyrus of the same rats following spatial exploratory behavior, in both the dorsal and more ventral regions of the hippocampus.
Materials and Methods
Subjects and behavioral procedures
Adult male (9–12 mo old) Fisher 344 rats (Harlan Sprague Dawley, Indianapolis, IN) were used in accordance with NIH guidelines and Animal Care and Use Committee at the University of Arizona. Animals were individually caged with free access to food and water. Rats (n=30) were assigned to one of the three groups: caged controls (n=10), spatial exploration group (n=10) and maximal electroconvulsive shock (n=10). The rats assigned to exploration group sampled the same environment twice for 5 min with either a 30, 60 or 120 min rest interval in their home cages. The rest interval time was different as these rats were also used for another experiment (assessing the time-course of Arc expression). The size of the environment was 61×61cm2 with a 30 cm high surrounding wall, the floor of the box was divided into a 3×3 grid. Each rat was moved to the center of a new square every 15 sec in a pseudorandom way to ensure adequate spatial sampling of the entire environment. Another group of rats were allowed to explore a rectangular track (6×24 inch) for 5 min, allowed a 20 min rest interval and given another 5 min exploration on the track different room (n=3). Lastly, another cohort of animals received maximal electroconvulsive shock treatment using a UGO Basile ECT unit (Via Giuseppe Di Vittorio 2–21036, Gemonio-Varee, Italy). The duration of shock was 1sec, at 85 mA current, 100Hz with a 0.5ms square wave pulse. Rats were sacrificed 30 min later after receiving MECS.
Brain extraction and dissection
Following the behavioral treatment rats were anesthetized with 5% isoflurane and decapitated with a rodent guillotine. Brains were rapidly removed, hemisected with the right hemisphere quickly frozen in isopentane cooled over an ethanol/dry ice bath and stored at –70° C until sectioning for in situ hybridization. Twenty micron thick sections were cut after blocking the hemi-brains such that all the experimental groups and negative controls (caged) and positive controls (MECS) were included on the same slide to minimize technical variability.
Fluorescence in situ hybridization
Riboprobes were generated from the full length Arc c-DNA (~ 3 K bp in length, described in Lyford et al. (1995) using a commercial RNA transcription kit (Maxiscript; Ambion, Austin, Texas) and RNA labeling nucleotide mix containing digoxigenin-tagged UTP (Roche Molecular Biochemicals, Nutley, N.J.). Fluorescence in situ hybridization was performed as described in detail by (Guzowski et al., 1999). Briefly, slides containing the sections were thawed to room temperature, fixed with freshly prepared buffered paraformaldehyde (4%) and treated with 0.5% acetic anhydride/1.5% triethanolamine. Incubated in methanol and acetone (1:1) for 5 min and equilibrated in 2× SSC. Sections were incubated with 100 µl 1× prehybridization buffer (Sigma, St. Louis, MS) for 30 min at room temperature. Approximately 100 ng of riboprobe was diluted in 1× hybridization buffer (Amersham, Piscataway, NJ), heat denatured at 90° C, chilled on ice and applied to each section. A coverslip was placed on each slide and incubated overnight at 56° C. Post hybridization washes started with 2× SSC, increased in stringency to 0.5× SSC at 56° C. RNase A (10 µg/ml) at 37° C was used to dissociate any single stranded RNA. After quenching the endogenous peroxidases with 2% H2O2, slides were blocked with NEN blocking agent (Perkin Elmer, Boston, MA) and incubated with an anti-digoxigenin Ab conjugated with HRP (Roche Molecular Biochemicals, Nutley, NJ) overnight at 4° C. Slides were washed with Tris-buffered saline containing 0.05% Tween-20 and the HRP-antibody conjugate was detected using a Cyanine-3 (CY3) tyramide signal amplification kit (Perkin Elmer, Boston, MA). Coverslips were applied to the slides after counterstaining with Sytox (Molecular Probes, Eugene, OR) with a small amount of Vectashield antifade media (Vector Labs, Burlingame, CA) and sealed with nail polish.
Confocal microscopy and cellular analysis
Stained sections were imaged using a Zeiss 510 Metaseries laser confocal microscope with a Plan Apo 40× oil immersion objective, N.A. 1.3 or a Plan Neofluar 10× objective. Laser settings, detector gain and offsets were kept constant after initial optimization for each slide. Three different subregions (CA1, CA3 and dentate gyrus) of the right hemisphere of the hippocampus from the dorsal (ranging from −2.64 mm to −3.48 relative to Bregma) and ventral (ranging from −5.64 mm to −6.12 relative to Bregma) regions were imaged (Figure 1). At these coordinates the “dorsal” region sampled corresponds to Fanselow and Dong’s (2010) “dorsal” region, and the more ventral coordinates used here to their “intermediate” region which overlaps with the ventral hippocampus as described by Bannerman (1999) and Moser et al. (1995). Areas of analysis from the CA1 or CA3 subregion were optically sectioned at ~ 0.75 µm in the z-plane. Three different CA1 and CA3 sites within each of the pyramidal cell fields were imaged in triplicate for each animal. On average, the number of dorsal CA1 and CA3 cells counted per animal was 450. The number ventral CA1 and CA3 cells counted per animal was also approximately 450 on average. Cells were counted by an experimenter blind to the conditions using Metamorph image analysis software. Image analysis was done as described earlier (Penner et al., 2011; Guzowski et al., 1999; Chawla et al., 2005) using Metamorph imaging software (Universal Imaging). Only whole neurons found in the middle 20% of the confocal stack were included in the analysis. Cells were classified as either 1) negative or 2) intranuclear Arc-positive only with one or two intense foci present in at least 3 planes.
Because Arc expression in the dentate gyrus (DG) is so sparse, the entire region was imaged from two to three slides per animal using the 10× objective and the confocal pinhole opened wide such that all the labeled cells were visible in a single optical plane. Images were connected via a montaging procedure. Specifically, the overlapping confocal images were first collected and used for offline reconstruction using MetaMorph image analysis software to prune common areas between images as follows: Two reconstructed dentate gyrus sections/rat from the middle planes of overlapping 10× Z-stacks were used for the analysis. The area of the granule cell layer and the total number of neurons was assessed in each reconstructed flat image. Approximately, 2500 cells in the suprapyramidal blade and ~ 2000 cells in the infrapyramidal blade were analyzed in the dorsal hippocampus and ~ 2000 suprapyramidal blade cells and ~2000 infrapyramidal blade cells were analyzed in the ventral hippocampus for each rat. The area was used to estimate the total number of neurons using a correction factor that represented the total neurons per square micron. This factor was derived from 92 Z-stacks from 10 different rats collected with a 40× objective for the dorsal hippocampus. The factor for ventral hippocampus was derived from 57 stacks from 5 different animals. The total number of neurons/stack was counted and the area of the granule cell layer (in µm2) from the middle plane was calculated (Chawla et al., 2005; Ramirez-Amaya et al., 2005). Utilizing this factor, the percent of neurons with Arc mRNA in the dentate gyrus of each rat was calculated according to the following formula:
p= the number of Arc (+) neurons in a given reconstructed flat image,
Ap= the area (in µm2) of the DG, as measured from the reconstructed flat image,
N= the total number of cells from all 40× Z-stacks,
A= the total area (in µm2) of the DG from the middle planes of all 40× Z-stacks.
Statistical Analysis
The average % cells showing Arc expression in the nuclear compartment for CA1and CA3 pyramidal cells, and DG granule cells was used as the dependent measure. A two-way ANOVA was conducted on these data using behavior (exploration vs control) and region (dorsal vs ventral) as the two factors.
Results
Spatial behavior induced more Arc mRNA expression in the dorsal as compared to more ventral hippocampal CA1 and CA3 subregions
Although we analyzed Arc-positive cells using the catFISH method (Guzowski et al., 1999), the rest intervals between the first 5 min behavior and the second 5 min exposure was greater than the usual 20 min, Arc mRNA translocate to cytoplasm within 5–15 min of transcription. Therefore, Arc mRNA induced by the second exploration session was measured as transcription foci in the nucleus, rather than cytoplasmic Arc signal. First of all there was no difference in the proportion of cells that expressed Arc as a function of behavioral treatment. All rats were sacrificed 5 min after the last exploratory treatment, and only the nuclear compartment was analyzed for Arc expression in this study. Some animals, however, had an initial exposure to this treatment at 30, 60 and 120 min prior to the last exploration. There was, however, no effect of differential timing of prior exploration treatment on the numbers of cells that expressed Arc 5 min before sacrifice (dorsal CA1, 60 vs 120min [F [1, 16] = 2.10; p = 0.17]; ventral CA1 only had one earlier time point at 30 min; dorsal CA3, 60 vs 120min [F [1, 14] = 1.18; p = 0.30]; ventral CA3 only had one earlier time point at 30 min).
Following exploration, dorsal CA1 expressed significantly more Arc mRNA positive cells (32%+/− 1.5) compared to the ventral CA1 (13% +/− 0.9); A two-way ANOVA revealed that there was a significant main effect of behavior relative to caged controls (F [1,41] = 67.83, p < 0.0001) and a main effect of region (F [1,41] = 26.43, p < 0.0001) (Figure 2A). Similarly, dorsal CA3 had 22% +/−1.8 Arc positive cells whereas the ventral CA3 expressed 8.1% +/− 0.9 Arc mRNA positive cells. A two-way ANOVA revealed a main effect of behavior vs caged controls (F [1, 36] = 15.13; p < 0.0004) and a main effect of region, (F [1,36] = 23.44; p < 0.00041) (Figure 3A).
More granule cells express Arc mRNA in the dorsal than ventral hippocampus in response to spatial behavior
Spatial behavior resulted in a greater number of Arc positive cells in both dorsal and ventral hippocampus suprapyramidal blade (sp) compared to caged controls. There was no difference between behavior-treated animals and caged rats in the infrapyramidal blade (ip) of DG in the ventral hippocampus, Figure 4A. The percentage of granule cells that expressed Arc mRNA in the present experiment in the dorsal DG (suprapyramidal and infrapyramidal blades) is comparable to previous reports (Chawla et al., 2005; Ramírez-Amaya et al., 2005; Alme et al., 2010; Gheidi et al., 2012). A significant difference in the proportions of granule cells that express Arc mRNA in the suprapyramidal blade (2.5% +/− 0.2) was seen compared with ventral DG ub (1.2%+/− 0.13); (F [1,28] = 48.87, p < 0.0001) (Figure 4A). A significant effect of suprapyramidal vs infrapyramidal DG blade was also seen (F [1,28] = 22.04, p < 0.0001). In addition, in the dorsal region we visually observed more Arc mRNA expression in the crest of the DG, where the suprapyramidal and infrapyramidal blades meet as has been previously described (Chawla et al., 2005).
Discussion
The main finding of the present study is that behavioral induction of Arc expression differs along the dorsal-ventral axis of the hippocampus in all 3 subregions examined - CA1, CA3 and DG. The general finding was a 2–3 fold reduction in the proportion of cells that express Arc in response to exploratory behavior in more ventral regions. This finding held within all individual animals, providing a direct comparison of behavior-driven expression. Consistent with previous reports, spatial behaviors induce robust Arc mRNA expression in dorsal hippocampal pyramidal cells compared to caged control animals (e.g., Guzowski et al., 1999; Guzowski et al., 2001; Vazdarjanova et al., 2002; Ramírez-Amaya et al., 2005; Guzowski et al., 2006; Penner et al., 2011; Hartzell et al., 2013). More ventrally located pyramidal cells did show behaviorally-induced Arc expression above that of caged control animals, but proportionally fewer cells were active compared to dorsal regions. The extent to which Arc expression differences in more ventral regions of the hippocampus arise from lower firing rates in those regions (Maurer et al., 2005), remains to be examined.
Our results are in agreement with Van et al. (2000). In this experiment performance on a 8-arm radial maze was used in combination with immunohistochemistry for cFos to examine protein levels during a spatial working memory task. In their study all hippocampal subfields showed increased cFos activation in response to task performance, with the dorsal hippocampus revealing increased cFos protein levels relative to the ventral hippocampus. Our study confirms that this difference in cFos protein also occurs at the RNA for the immediate early gene Arc along the longitudinal axis. Arc expression differences between the dorsal and most temporal subregions was also reported by Beer et al. (2014) following a spontaneous object recognition task that included both spatial and non-spatial components of recognition memory. Similar to our data, the number of cells that expressed Arc in their study was reduced in the ventral CA1 and CA3 regions compared to dorsal hippocampal subregions in the spatial version of the task. Interestingly, in the non-spatial version of the task Arc expression was similar across dorsal and ventral CA3 subregions.
Several factors may contribute to the difference observed between the dorsal and more ventral regions of the hippocampus. First, there are substantial connectivity differences along the dorsal/ventral axis. Afferents from cortical and subcortical areas differ, with the dorsal hippocampus receiving inputs from the dorso-lateral entorhinal cortex while the ventral hippocampus receives fibers from the ventro-medial entorhinal cortex along with subcortical inputs from the hypothalamus and amygdala (e.g., Hargreaves et al., 2005; McNaughton et al., 2006). Second, hippocampal efferents to the subiculum, entorhinal perirhinal, retrospenial, and cingulate cortices, may contribute to the regional dissociation along the septo-temporal axis (Swanson and Cowan, 1977; Jay and Witter, 1991). Moreover, non-spatial factors like reward and emotion may have a more powerful effect on activity in the more temporal regions of the hippocampus.
In addition, data from lesions to the dorsal or ventral hippocampus show different effects on a number of behaviors such as those in the Morris water maze task, linear track and fear conditioning (Moser et al., 1993; Hock and Bunsey, 1998; Bannerman et al., 1999; Kjelstrup et al., 2002; Jarrard et al. 2012; Nadel et al., 2013). This is consistent with the idea that detailed representation in the dorsal hippocampus is essential for precise spatial navigation while the coarse representation in the ventral hippocampus can additionally reflect non-spatial aspects of behavior. Furthermore, there is a spatial scaling gradient in the firing of CA1 pyramidal cells along the dorsal/ventral axis of the hippocampus (Jung et al., 1994; Maurer et al., 2005) similar to the gradient found in entorhinal cortex (Sargolini et al., 2006). Neurons in the more dorsal regions show smaller firing fields and greater spatial resolution, which decreases towards ventral hippocampal regions. Admittedly, neither extreme dorsal or ventral hippocampal regions have been extensively sampled in either recording studies or in behavior-driven gene expression experiments including the present study. It will be necessary to evaluate extreme septal and temporal poles in order to determine whether there is a true functionally relevant gradient along the longitudinal axis.
Additionally, analysis of the functional and structural connectivity of the hippocampus suggests a distinction between a posterior medial cortical system and an anterior temporal cortical system (Ranganath and Richey; 2012). The posterior medial system includes the parahippocampal and retrosplenial cortices and the anterior temporal system includes the perirhinal cortex. The anatomical and functional characteristics of these systems suggest that they are core components of two separate large-scale networks that support different types of memory. This organization supports functional dissociations along the longitudinal axis of the hippocampus, with unique topographical gradients across its long axis (Small et al., 2001), including differences in contributions to emotional processing (Fanselow and Dong, 2010) and scale of contextual representation (Strange et al., 2014). Furthermore, reviews of the role that the hippocampus has been shown to play hippocampal in memory (e.g., Eichenbaum et al., 2016) identify a broad range of dimensions by which the hippocampal region can map cognition. These include egocentric visual space, social context, conceptual space and non-spatial dimensions, and each of these may be differentially mapped along the long axis of the hippocampus.
The finding that there is a two to three-fold reduction in more ventral regions of the hippocampus in the proportion of pyramidal cells in CA1 and CA3 and granule cells in the dentate gyrus that express Arc in response to exploratory behavior, provides a framework to further explore possible transcriptomic and functional differences along the long axis of the hippocampus.
Acknowledgments
Grant Sponsor: Supported by the Evelyn F. McKnight Brain Institute, the National Institutes of Health AG09219 and MH060123 and NSF1631465
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