TABLE 5 .
Variation rates for annotated genes and predicted effectors on primary contigs in P. coronata f. sp. avenae
| Gene or effector type | No. of variants/kbp for indicated isolate |
|
|---|---|---|
| 12SD80 | 12NC29 | |
| Heterozygous variants for all genes | 2.83 | 3.76 |
| Heterozygous variants for effectors | 2.86 | 4.55 |
| Non-synonymous heterozygous variants for all genes | 0.98 | 1.26 |
| Non-synonymous heterozygous variants for effectors | 0.93 | 1.57 |
| Inter-isolate variants for all genes | 6.37 | 5.01 |
| Inter-isolate variants for all effectors | 7.39 | 5.88 |
| Inter-isolate variants for orthologous genes | 6.20 | 4.95 |
| Inter-isolate variants for orthologous effectors | 7.76 | 5.86 |