Skip to main content
. 2018 Feb 22;6:e4392. doi: 10.7717/peerj.4392

Table 3. Experimental screening of the candidate clusters unique to species or group of taxa.

Targeted taxa # tested targeted taxa # tested non-targeted taxa # candidate genes tested # success
Phytophthora
P. ramorum 11 P. ramorum 40 Phytophthora spp. 28 5 (17.9%)
P. lateralis 4 P. lateralis 40 Phytophthora spp. 16 6 (37.5%)
P. kernoviae 1 P. kernoviae 22 Phytophthora spp. 12 9 (75.0%)
P. ramorum+P. lateralis 11 P. ramorum, 4 P. lateralis 39 Phytophthora spp. 19 5 (26.3%)
Dothideomycetes
Sphaerulina musiva 2 S. musiva 14 Mycosphaerella spp. 51 14 (27.5%)
S. populicola 2 S. populicola 14 Mycosphaerella spp. 65 16 (24.6%)
Phaeocryptopus gaeumannii 10 P. gaeumannii 14 Mycosphaerella spp. 10 3 (30%)
S. musiva+S. populicola 2. S. musiva, 2 S. populicola 12 Mycosphaerella spp. 39 13 (33.3%)
S. musiva+S. populicola+Mycosphaerella sp. STON1 2. S. musiva, 2 S. populicola, 1 Mycosphaerella sp. STON1 11 Mycosphaerella spp. 6 2 (33.3%)
Rusts
Melampsora larici-populina 13 M. larici-populina 15 Melampsora spp., 1 Coleosporium sp., 1 Pucciniastrum sp., 1 Cronartium sp., 2 Chrysomyxa spp. 10 2 (20%)
M. medusae f. sp. deltoidae 10 M. medusae 15 Melampsora spp., 1 Coleosporium sp., 1 Pucciniastrum sp., 1 Cronartium sp., 2 Chrysomyxa spp. 10 2 (20%)
Cronartium ribicola 10 C. ribicola 10 Cronartium spp., 5 Melampsora spp., 3 Coleosporium spp., 3 Pucciniastrum spp., 2 Chrysomyxa spp. 20 3 (15%)
Melampsora genus 19 Melampsora spp. 2 Coleosporium spp., 3 Pucciniastrum spp., 3 Cronartium spp., 3 Chrysomyxa spp. 5 3 (60%)
Cronartium genus 11 Cronartium spp. 8 Melampsora spp., 4 Coleosporium spp., 5 Pucciniastrum spp., 7 Chrysomyxa spp. 8 2 (25%)