Abstract
Triple-negative breast cancer (TNBC) has high rates of local recurrence and distant metastasis, partially due to its high invasiveness. The Forkhead box C1 (FOXC1) transcription factor has been shown to be specifically overexpressed in TNBC and associated with poor clinical outcome. How TNBC’s high invasiveness is driven by FOXC1 and its downstream targets remains poorly understood. In the present study, pathway-specific PCR array assays revealed that WNT5A and matrix metalloproteinase-7 (MMP7) were upregulated by FOXC1 in TNBC cells. Interestingly, WNT5A mediates the upregulation of MMP7 by FOXC1 and the WNT5A-MMP7 axis is essential for FOXC1-induced invasiveness of TNBC cells in vitro. Xenograft models showed that the lung extravasation and metastasis of FOXC1-overexpressing TNBC cells were attenuated by knocking out WNT5A, but could be restored by MMP7 overexpression. Mechanistically, FOXC1 can bind directly to the WNT5A promoter region to activate its expression. Engineered DNA-binding molecule-mediated chromatin immunoprecipitation (enChIP), coupled with mass spectrometry, identified FOXC1-interacting proteins including a group of heterogeneous nuclear ribonucleoproteins involved in WNT5A transcription induction. Finally, we found that WNT5A activates NF-κB signaling to induce MMP7 expression. Collectively, these data demonstrate a FOXC1-elicited non-canonical WNT5A signaling mechanism comprising NF-κB and MMP7 that is essential for TNBC cell invasiveness, thereby providing implications toward developing an effective therapy for TNBC.
Introduction
Triple-negative breast cancer (TNBC) is a heterogenous group of tumors that lack immunohistochemical staining or overexpression of the estrogen receptor (ER), progesterone receptor (PR), and human epidermal growth factor receptor 2 (HER2).1 Compared with ER-positive or HER2-positive breast cancer, TNBC is associated with a high histologic grade, frequent distant metastasis, and high mortality rate.1,2 Although it has been intensively studied, the mechanism underlying the poor prognosis of TNBC remains to be elucidated.
The WNT signaling pathway has been demonstrated to be involved in tumorigenesis.3 WNT signaling is frequently activated in TNBC as opposed to other subtypes of breast cancer.4,5 Recent studies have established the transcription factor forkhead box C1 (FOXC1) as a pivotal diagnostic and prognostic biomarker for basal-like breast cancer (BLBC), a subtype of breast cancer which is characterized by basal cytokeratin expression and shares many similar clinicopathologic traits with TNBC.6,7 Elevated FOXC1 expression is associated with a worse overall survival of breast cancer patients.6,8 In this study, we explored the FOXC1-associated mechanism underlying the invasiveness of TNBC cells. Our results show that WNT5A, a ligand that mediates non-canonical β-catenin-independent WNT signaling, was markedly induced by FOXC1 in TNBC cells. Upregulated WNT5A activated NF-κB signaling, which in turn induced matrix metalloproteinase-7 (MMP7) expression. This WNT5A-NF-κB-MMP7 axis elicited by FOXC1 is essential for the invasiveness of TNBC cells, and may be further exploited to develop new treatment for TNBC.
Results and Discussion
WNT5A is up-regulated by FOXC1 in TNBC cells
Because FOXC1 expression and WNT signaling are associated with TNBC, we tested whether FOXC1 regulates WNT pathways. Given that FOXC1 does not activate β-catenin-dependent WNT signaling in TNBC cells,9 we performed the WNT signaling pathway PCR array assay using control and FOXC1-overexpressing MDA-MB-231 human TNBC cells to explore the potential effect of FOXC1 on WNT signaling in an unbiased manner. WNT ligands, WNT5A and WNT7A, and the WNT target gene MMP7 were significantly up-regulated in FOXC1-overexpressing cells, whereas VANGL2, a receptor of WNT ligands, was down-regulated (Fig. 1A). The up-regulation of WNT5A and MMP7 mRNA by FOXC1 was subsequently confirmed by PCR assays (Fig. 1B), but the expression of WNT7A and VANGL2 mRNA was undetectable in the same assays when testing different amplification cycles (Fig. 1B). This discrepancy might be caused by the extremely low endogenous levels of WNT7A and VANGL2 mRNA in MDA-MB-231 cells, which resulted in the very large variation of the Ct (cycle threshold) values in the PCR array assay (data not shown).
Consistent with our results, earlier studies showed that MMP7 is up-regulated by FOXC1 and their expression is positively correlated with each other in breast cancer cells.10 WNT5A has also been shown to be expressed in TNBC samples.11 Here, we examined the association between the expression of FOXC1 and WNT5A in normal human mammary epithelial and breast cancer cells. As shown in Fig. 1C, the expression of FOXC1 positively correlated with WNT5A in both mRNA and protein levels in breast cancer cells. This positive correlation was also observed in a microarray dataset of 51 breast cancer cell lines12 (Fig. 1D). The regulation of WNT5A by FOXC1 was further confirmed in other TNBC cell lines, subgrouped by Lehmann et al.13 and Neve et al.,14 except SUM149 cells (Supplementary Fig. 1A–C). Notably, FOXC1 induced WNT5A mRNA, but not protein expression in MDA-MB-468 cells (Supplementary Fig. 1A and B). We speculate that the discrepancy between detected WNT5A protein and mRNA levels in MDA-MB-468 cells might be attributed to protein translation and stability, as well as secretion of WNT5A protein. The positive correlation between FOXC1 and WNT5A protein levels was further validated by immunohistochemistry assays performed in a TNBC tissue microarray (Fig. 1E). Taken together, these results demonstrate that WNT5A is up-regulated by FOXC1 in TNBC cells.
Because MMP7 is a downstream target of tumor-associated macrophage-derived WNT5A,15 we tested whether FOXC1 induction of MMP7 is in fact mediated by WNT5A in TNBC. To do so, WNT5A was knocked out by CRISPR/Cas9 in FOXC1-overexpressing MDA-MB-231 cells (Supplementary Fig. 1D). We found that the FOXC1-induced MMP7 gene expression was attenuated in the WNT5A-knockout cells (Fig. 1F). Moreover, the expression of MMP7 in BT549 and HCC1806 cells, which have high levels of endogenous FOXC1, was suppressed after knocking out FOXC1 and restored by recombinant WNT5A protein treatment (Fig. 1G; Supplementary Fig. 1A and E). These results suggest that MMP7 is regulated by a FOXC1-WNT5A signaling axis in TNBC cells.
WNT5A promoter is activated by a FOXC1 transactivator complex
To test whether FOXC1 directly binds to the WNT5A promoter, we analyzed the sequence of the WNT5A promoter region and found two potential FOXC1-binding sites with the core consensus sequence of GTAAA16 (Fig. 2A). Accordingly, two 177bp fragments of the WNT5A promoter containing wild-type or mutant FOXC1-binding sites were cloned into a pGL4 reporter construct and luciferase reporter assays were performed. As shown in Fig. 2B, FOXC1 dramatically increased WNT5A luciferase activity in TNBC cells. This result was further confirmed by a ChIP assay in which the WNT5A promoter fragment was enriched by an immunoprecipitation assay using an anti-FOXC1 antibody (Fig. 2C). To gain insight into the molecular mechanism by which FOXC1 upregulates WNT5A transcription, we adopted the engineered DNA-binding molecule-mediated chromatin immunoprecipitation (enChIP) assay17 (Fig. 2D). Subsequent mass spectrometry analysis identified proteins that bind to the WNT5A promoter together with FOXC1 (Fig. 2E and Supplementary Table 1). The interaction between FOXC1 and several representative proteins (i.e., KHSRP, HNRNPH1, TRIM28, and DDX5) from the proteomics analysis was further confirmed by reciprocal co-immunoprecipitation assays (Co-IP) (Fig. 2F). ChIP assays also demonstrated the binding of the FOXC1-interacting proteins to the WNT5A promoter region containing FOXC1-binding sites (Fig. 2G). In addition, these binding interactions were enhanced when FOXC1 was increased (Fig. 2G). The binding of KHSRP and HNRNPH1 to the WNT5A promoter was also confirmed by biotinylated oligonucleotide precipitation assays (Supplementary Fig. 2A). Individual knockdown of these proteins reduced FOXC1-induced WNT5A mRNA expression to a varying extent (Fig. 2H and I). Taken together, these data suggest that FOXC1 binds directly to the promoter of WNT5A and collaborates with other nuclear proteins to induce WNT5A expression.
Of note, some of the top enriched proteins have been shown to be involved in gene transcription. For example, ACTN4 can function as a transcriptional co-activator to promote the invasiveness of breast cancer cells.18 TRIM28 and ERH have been found to promote the accumulation of RNA polymerase II (PolII) to the transcriptional start site to initiate gene transcription.19,20 As a helicase, DDX5 can induce the recruitment of PolII to gene promoters to regulate breast cancer cell proliferation.21 Interestingly, KHSRP, HNRNPH1, PTBP1, and FUBP1 are heterogeneous nuclear ribonucleoproteins (HNRNPs), which typically bind to pre-mRNA and participate in gene splicing.22 Recent studies suggest that HNRNPs may also bind to DNA to regulate gene transcription. For example, FUBP1 can bind to an upstream element of the c-MYC promoter to regulate c-MYC mRNA expression.23
WNT5A activates NF-κB signaling in TNBC cells
WNT5A exerts its function mainly through activating β-catenin-independent signaling,24 which also has been observed in TNBC cells.25 However, it can simultaneously activate both β-catenin-independent and -dependent WNT signaling in TNBC cells to promote tumorigenicity.11 Since our previous study showed that FOXC1 does not activate β-catenin-dependent WNT signaling in TNBC cells,9 we next focused on the non-canonical pathways of WNT5A.
WNT5A can activate PKC and JNK pathways to promote the invasiveness of melanoma26 and breast cancer cells,15 respectively. However, we found that FOXC1 did not induce but, rather reduced the phosphorylation levels of PKC and JNK in TNBC cells (Fig. 3A). Surprisingly, FOXC1 increased SRC activation, which is partially dependent on WNT5A as WNT5A knockout reduced SRC activation (Fig. 3A and Supplementary Fig. 3A). SRC is a well-known proto-oncogene that is involved in multiple aspects of tumorigenesis. We found that the SRC inhibitor Dasatinib showed no effect on the FOXC1-induced MMP7 expression (Supplementary Fig. 3B) despite inhibiting SRC phosphorylation in FOXC1-overexpressing cells (Supplementary Fig. 3C), suggesting SRC signaling is not involved in MMP7 induction by the FOXC1-WNT5A axis. The functions of the FOXC1-induced activation of SRC signaling in TNBC cells need to be further characterized.
NF-κB signaling, which is highly active in TNBC cells and can be activated by FOXC1,27 mediates the functions of WNT5A in human dental pulp cells,28 so we tested the involvement of NF-κB signaling in the effect of FOXC1 on WNT5A in TNBC cells. We found that knocking out WNT5A impaired the FOXC1 induction of NF-κB-responsive luciferase activity, and WNT5A treatment abolished this reduction (Fig. 3B). In line with these results, FOXC1 knockout inhibited the NF-κB-responsive luciferase activity in HCC1806 cells, which was reversed by WNT5A treatment (Supplementary Fig. 3D). All these data suggest that FOXC1-induced WNT5A can activate NF-κB signaling in TNBC cells. Next, we treated FOXC1-overexpressing TNBC cells with different concentrations of the NF-κB inhibitor Bay 11-7082. As shown in Fig. 3C, inhibition of NF-κB substantially lowered the FOXC1-induced MMP7 expression. Similar results were also found in HCC1806 cells (Supplementary Fig. 3E). Of note, expression of KHSRP, the top factor identified in the enChIP-proteomics assay (Fig. 2E), was not affected by Bay 11-7082 treatment (Supplementary Fig. 3F), suggesting that the effect of Bay 11-7082 on MMP7 mRNA expression is selective. In agreement with the above results, p65 overexpression elevated MMP7 expression in WNT5A-KO TNBC cells (Fig. 3D and Supplementary Fig. 3G). These data suggest that NF-κB signaling mediates the effect of WNT5A on MMP7 expression in TNBC cells, which is supported by previous reports showing that NF-κB regulates MMP7 expression in cholangiocarcinoma and chondrosarcoma cells.29,30
WNT5A mediates the FOXC1-induced invasiveness of TNBC cells
WNT5A has been shown to promote cancer cell migration and invasion and distant metastasis in many cancer subtypes.31 It can induce a mesenchymal phenotype and thus enhance the migration and invasion ability of human mammary epithelial cells.32 To test whether WNT5A mediates FOXC1-induced migration and invasion of TNBC cells, we first performed a wound healing assay. As shown in Fig. 4A, knocking out WNT5A significantly attenuated the migration of FOXC1-overexpressing MDA-MB-231 cells. This effect was further confirmed by the transwell migration assay (Fig. 4B). The Matrigel invasion assay also showed that WNT5A mediates FOXC1-induced invasion of TNBC cells (Fig. 4C). Of note, FOXC1-induced proliferation in TNBC cells was not affected by WNT5A knockout (Supplementary Fig. 4A).
Because MMP7 is regulated by the FOXC1-WNT5A axis, we tested whether MMP7 mediates the effect of WNT5A on migration and invasion in TNBC cells. FOXC1+/WNT5A-KO MDA-MB-231 cells were treated with different concentrations of the recombinant MMP7 protein. MMP7 treatment restored the WNT5A-KO-mediated inhibition of migration and invasion (Fig. 4D–F), to different extents. In addition, the inhibition of migration and invasion was restored by WNT5A treatment in FOXC1-knockout HCC1806 cells (Supplementary Fig. 4B and C). We also knocked down MMP7 expression in FOXC1-overexpressing MDA-MB-231 cells (Supplementary Fig. 4D). As shown in Fig. 4G and H, MMP7 reduction dramatically suppressed cell migration and invasion, which was not affected by WNT5A treatment. Similar results were also found in HCC1806 cells (Supplementary Fig. 4E–G). These data demonstrate the involvement of FOXC1-WNT5A-MMP7 signaling in regulating the invasiveness of TNBC cells.
The effect of FOXC1-WNT5A-MMP7 signaling on TNBC cell invasiveness was further confirmed in vivo. Tail vein injection of MDA-MB-231 cells in nude mice showed that knocking out WNT5A inhibited the FOXC1-induced lung extravasation and metastasis, while MMP7 overexpression reversed this inhibition (Fig. 4I and J; Supplementary Fig. 4H and I). Matrix metalloproteinase proteins have been shown to be involved in tumor progression in multiple processes, including cell migration and invasion.33 MMP7 is highly expressed in BLBC/TNBC compared with other breast cancer subtypes.34 Based on previous and our present findings, we herein propose that a FOXC1-WNT5A-MMP7 signaling axis plays an important role in the migration, invasion, and distant metastasis of TNBC cells.
In summary, our study reveals a novel FOXC1-mediated regulatory mechanism of non-canonical WNT5A signaling pathways in TNBC. This WNT5A-NF-κB-MMP7 signaling is essential for FOXC1-induced invasiveness of TNBC cells (Fig. 4K), suggesting new interventional strategies to inhibit and treat metastasis of TNBC.
Supplementary Material
Acknowledgments
Financial Support: This work was supported by the National Institutes of Health (CA151610), the Avon Foundation for Women (02-2014-063), and David Salomon Translational Breast Cancer Research Fund to Xiaojiang Cui, and the Fashion Footwear Charitable Foundation of New York, Inc., the Entertainment Industry Foundation, the Margie and Robert E. Petersen Foundation, and the Linda and Jim Lippman Research Fund to Armando Giuliano.
Footnotes
Disclosure of Potential Conflicts of Interest
The authors declare no conflict of interests.
Authors’ Contributions
Conception and design by BC Han and XJ Cui. Development of methodology by BC Han, B Zhou, H Tanaka, W Yang, and XJ Cui. Acquisition of data (provided animals, acquired and managed patients, provided facilities, etc.) by BC Han, B Zhou, BW Gao, YL Xu, W Yang, and XJ Cui. Analysis and interpretation of data (e.g., statistical analysis, biostatistics, computational analysis) by BC Han, B Zhou, Y Qu, S Chung, H Tanaka, W Yang, AE Giuliano, and XJ Cui. Writing, review, and/or revision of the manuscript by BC Han, B Zhou, Y Qu, BW Gao, S Chung, H Tanaka, W Yang, AE Giuliano, and X Cui. Administrative, technical, or material support (i.e., reporting or organizing data, constructing databases) by BC Han, B Zhou, Y Qu, BW Gao, S Chung, W Yang, and XJ Cui. Study supervision by BC Han, AE Giuliano, and XJ Cui.
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