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International Journal of Molecular Medicine logoLink to International Journal of Molecular Medicine
. 2018 Feb 5;41(5):2704–2714. doi: 10.3892/ijmm.2018.3457

Long noncoding RNA ENSRNOG00000037522 is involved in the podocyte epithelial-mesenchymal transition in diabetic rats

Li Ling 1,*, Zhen Tan 2,*, Changning Zhang 1, Shuyan Gui 1, Yuanyuan Hu 1, Libo Chen 1,✉
PMCID: PMC5846646  PMID: 29436579

Abstract

Diabetic nephropathy (DN) is one of the most common complications associated with type I and II diabetes mellitus. Long noncoding RNAs (lncRNAs) have been implicated in various physiological and pathological processes, and recent evidence has demonstrated that they are involved in the process of the epithelial-mesenchymal transition (EMT). In the present study, the potential functions of lncRNA ENSRNOG00000037522 during the EMT process in DN were investigated. The results identified that the level of the lncRNA ENSRNOG00000037522 was significantly increased in kidney tissues collected from rats with streptozocin (STZ)-induced DN accompanied by impairment of the glomerular podocytes. It was further demonstrated that the silencing of lncRNA ENSRNOG00000037522 by small interfering RNA transfection partially restored the podocyte function. In addition, knockdown of lncRNA ENSRNOG00000037522 repaired the damage to the podocytes via regulating vimentin, podocalyxin-like 1 and nephrin expression. In conclusion, the current results demonstrated that lncRNA ENSRNOG00000037522 serves a pivotal role in the podocyte EMT in DN.

Keywords: diabetic nephropathy, long noncoding RNA, ENSRNOG00000037522, podocytes, epithelial-mesenchymal transition

Introduction

The incidence of diabetes mellitus (DM) has markedly increased over the past few decades due to unhealthy diet, lack of exercise and deteriorating environmental conditions (1,2). Among the various microvascular complications of the disease, diabetic nephropathy (DN) is frequently observed and is the leading cause of end-stage renal disease (3). Podocytes are a key component of the kidney filtration barrier, and podocyte injury has been indicated to serve an important role in the pathogenesis of DN, according to a number of studies (4–8). Podocytes are terminally differentiated visceral epithelial cells that are located outside the glomerular capillaries and form the final filtration barrier to protein loss (9–11). In DN, podocyte injury leads to the disruption of the filtration barrier and to protein leakage. In addition, podocyte depletion has been indicated as an important early pathologic marker of DN (7,12,13). Accumulating evidence also suggested that the epithelial-mesenchymal transition (EMT) is a possible cause of podocyte depletion in DN. During EMT, epithelial cells are transformed to mesenchymal cells in response to injurious stimuli (10,13,14). Cells lose their original features when the pathological process of EMT occurs, consequently reducing cell-to-cell contact, damaging cell polarity and recapturing the characteristics of the mesenchymal markers, such as α-smooth muscle actin (α-SMA) and vimentin (15).

Long noncoding RNAs (lncRNAs) are non-protein-coding transcripts with a length of >200 nucleotides that serve important roles in tumorigenesis (16,17), RNA transcription (18,19) and mRNA translation (20,21). Furthermore, evidence has suggested that lncRNAs may be functionally important in DM progression through the modulation of renal responses to hyperglycemia and the progression of DN (22,23). Several IncRNAs have been implicated in diabetic retinopathy, including MALAT1 (24), a potential biomarker for the prognosis and diagnosis of this disease. Wang et al (25) reported that a novel lncRNA, CYP4B1-PS1-001, was significantly downregulated in response to early DN in vivo and in vitro, and that overexpression of CYP4B1-PS1-001 inhibited the proliferation and fibrosis of mesangial cells. In addition, the lncRNAs H19 and HULC are known to be upregulated by oxidative stress, as well as to regulate cholangiocarcinoma migration and invasion (26). EMT is a potential pathway leading to podocyte depletion and proteinuria in diabetic kidney disease (27). However, the association of lncRNAs with the EMT in DN remains unclear.

In order to understand the functions of lncRNAs during the EMT process in streptozocin (STZ)-induced DN, lncRNA microarrays were initially used in the present study to identify the lncRNAs with differential expression between normal and DN rats. The results indicated that ENSRNOG00000037522 was the most upregulated lncRNA between normal and DN rats, and that the knockdown of ENSRNOG00000037522 affected the progression of EMT in DN. The current study provides novel insight into the mechanism linking lncRNA function with DN, and lncRNA ENSRNOG00000037522 may serve as a novel target for the development of DN.

Materials and methods

Rat model of diabetes

A total of 24 male Sprague Dawley rats (age, 8 weeks; weight, 180–200 g) were purchased from Forevergen Biotechnology Co., Ltd. (Guangzhou, China; http://www.forevergen.cn/). All animal studies were conducted under the review and approval of the Ethics Committee of Shenzhen Nanshan Hospital (Shenzhen, China). Rats were randomly allocated into three groups, including the control group, and two diabetes groups with rats examined at 1 or 6 weeks after STZ injection (n=8 per group). Each group was subjected to controlled conditions of 20–22°C, relative humidity of 50–55%, and a 12-h light/dark cycle. After 24 h of fasting, diabetes in the two groups was induced by a single intraperitoneal injection of STZ (50 mg/kg) (Sigma-Aldrich, Merck KGaA, Darmstadt, Germany) that was dissolved in 5 mmol/l citrate buffer (pH=4.5) within 30 min, while rats in the control group received intraperitoneal injection of the same dose of citrate buffer alone within 30 min (28). Rats were fed with Purina Rat Chow (Ralston Purina Company, Barcelona, Spain) throughout the experimental period. All rats had free access to food and water. Venous blood was collected at 24, 48 or 72 h after STZ injection in order to assess whether the diabetes model had been successfully established (blood glucose level of ≥16.7 mmol/l). Rats with STZ-induced diabetes were treated with 2 U/kg protamine zinc insulin at 24 h after STZ injection to avoid high glucose-induced mortality. At the end of 1 and 6 weeks after STZ or citrate buffer injection, all rats were euthanized with an intraperitoneal overdose of pentobarbital (200 mg/kg), and the kidneys were rapidly harvested and stored at −80°C for use in subsequent experiments.

Cell culture

A total of 8×107 inactivated dynabeads were suspended in Hank's balanced salt solution (HBSS; Gibco; Thermo Fisher Scientific, Inc., Waltham, MA, USA). Next, the minced kidney specimens were digested with 1 mg/ml collagenase A at 37°C for 30 min and gently pressed through a 100-µm cell strainer using a flattened pestle. Then the kidney lysate was mixed into HBSS and dynabeads. The mixture containing kidney lysate and dynabeads was centrifuged at 200 × g for 5 min at 4°C, and the precipitates were resuspended in 5 ml HBSS. Subsequent to washing three times with HBSS, the isolated glomeruli containing dynabeads were gathered by a magnetic particle concentrator and cultured in Dulbecco's modified Eagle medium (DMEM)/F12 (Gibco; Thermo Fisher Scientific, Inc.) at 37°C and 5% CO2. After 7 days of culture, the glomeruli were digested in HBSS containing 1 mg/ml collagenase A and 0.2 mg/ml deoxyribonuclease I at 37°C for 60 min, followed by centrifugation for 5 min at 1,500 × g. The podocytes were then resuspended in DMEM/F12 medium and counted with a blood cell counter. Finally, the morphology of the podocytes was examined at day 3, 5 and 7 with a scanning electron microscope (Nikon Corp., Tokyo, Japan) at ×100 magnification. In addition, the podocytes were treated with high glucose (30 mmol/l) at day 7 for 2 h at room temperature.

Immunohistochemical analysis

All kidney tissues were fixed overnight in formalin solution, dehydrated in ethanol, embedded in paraffin and then sectioned at 5 mm. The slides were blocked with 5% normal goat serum (Gibco, Thermo Fisher Scientific, Inc.) for 15 min at room temperature and incubated overnight at 4°C with primary antibodies, as follows: Anti-α-SMA (bs-0189R; 1:200; Bioss Biotechnology Co., Ltd., Beijing, China), anti-vimentin (ab137321; 1:100; Abcam, Cambridge, MA, USA), anti-nephrin (ab216341; 1:100; Abcam), and anti-podocalyxin-like 1 (PODXL1; ab197769; 1:100; Abcam). Subsequent to washing with PBS, the slides were incubated with the rabbit anti-rat horseradish peroxidase (HRP)-conjugated IgG secondary antibody (ab6734; 1:500; Abcam) at room temperature for 20 min. A DAB kit (Sigma-Aldrich; Merck KGaA, Darmstadt, Germany) was used to detect immunohistochemical reactions. The slides were then examined under a phase contrast light microscope (Eclipse E600; Nikon Corp.) at ×200 magnification.

ELISA

Blood and urine samples were obtained at 1 and 6 weeks from the rats in each group. Blood was obtained from a tail vein. Serum was immediately separated by centrifugation at 6,000 × g for 20 min and stored at −80°C until required for measurement. Urine samples were collected using metabolic cages. Kidney injury was assessed by measuring the levels of serum cystatin C (CysC), serum β2-microglobulin (β2-MG), blood urea nitrogen (BUN) and urine microalbumin (UmAlb). ELISA kits were used to determine the concentration of serum CysC (In-Ra0699; Innova Biotech Co., Ltd., Beijing, China), serum β2-MG (48-MICRT-E01; Alpco Diagnostics, Salem, NH, USA) and UmAlb (MBS9304276; MyBioSource, Inc., San Diego, CA, USA) with the enzyme immunoassay method according to the manufacturer's protocol. The content of the samples was then calculated with a spectrophotometer at 450 nm. BUN concentration was measured using a Urea Assay kit (ab83362; Abcam) with a spectrophotometer at 570 nm. These concentrations were quantified against a standard curve calibrated with known amounts of protein. Measurements were performed in triplicate.

Western blot analysis

To detect the glomerular proteins, western blot analysis was conducted. Briefly, cells were harvested and lysed in radioimmunoprecipitation assay buffer (Gibco, Thermo Fisher Scientific, Inc.) [containing 0.6 g Tris in 100 ml ddH2O at pH 7.5, 0.88 g NaCl, 0.1 g sodium dodecyl sulphate (SDS), 0.5 g sodium deoxycloate and 1.0 g NP-40 Tergitol] and a protease inhibitor mixture (Sigma-Aldrich; Merck KGaA). Next, the podocyte extracts were centrifuged at 4°C for 15 min at 1,000 × g, and the supernatant was collected. The protein concentration was then determined with a bicinchoninic acid protein assay kit (Sangon Biotech Co., Ltd., Shanghai, China). Subsequently, 20 µg protein was separated by 10% SDS-polyacrylamide gel electrophoresis and transferred to a polyvinylidene difluoride membrane (Bio-Rad Laboratories, Inc., Shanghai, China). After blocking in 1% blocking reagent in Tris-buffered saline [10 mM Tris (pH 7.5), 150 mM NaCl] (Gibco, Thermo Fisher Scientific, Inc.) for 1 h at room temperature, the protein samples were then incubated overnight at 4°C with primary antibodies for anti-α-SMA (no. 14968, 1:500; Cell Signaling Technology, Inc., Danvers, MA, USA), anti-vimentin (no. ab92547, 1:500; Abcam), anti-PODXL1 (no. SAB2500809, 1: 500; Sigma-Aldrich; Merck KGaA), anti-nephrin (no. ab136927, 1:500; Abcam) and GAPDH (ab9485, 1:500; Abcam). This was followed by incubation with a HRP-labeled goat anti-rabbit secondary antibody (1:1,000; Santa Cruz Biotechnology, Inc., Dallas, TX, USA) for 1 h at room temperature. Finally, the proteins were visualized with an enhanced chemiluminescence detection kit (Thermo Fisher Scientific, Inc.) and analyzed using ImageJ software, version 14.8 (National Institutes of Health, Bethesda, MD, USA).

Microarray lncRNA profiling

The lncRNA target sequences were merged from multiple databases, including RefSeq Build 37 (https://www.ncbi.nlm.nih.gov/refseq/), Ensembl Release 55 (http://www.ensembl.org), Unigene Build 176 (https://www.ncbi.nlm.nih.gov/unigene), GenBank (https://www.ncbi.nlm.nih.gov/gene) and RIKEN 3 (http://www.riken.jp). After 6 weeks, the podocytes were obtained from control and STZ-treated diabetic rats. Total RNA was extracted using TRIzol reagent (Takara Bio, Inc., Kusatsu, Japan), the concentration was measured using a NanoDrop spectrophotometer ND-1000 (Thermo Fisher Scientific, Inc.). Total RNA was converted into cDNA using a Takara reverse transcription kit (Takara Bio, Inc.), after which cRNA was synthesized from ~2 µg total RNA using an mMessage mMachine kit (Ambion, Thermo Fisher Scientific, Inc.) according to the manufacturer's standard protocols. Next, cRNA was hybridized to the microarray overnight, and microarray profiling was performed using the RiboArray™ Rat lncRNA Array (http://www.ribobio.com/sitecn/Service2.aspx?id=104; RiboBio Co., Ltd. (Guangzhou, China) following the manufacturer's protocol. The microarray after hybridization were washed with a Gene Expression Wash Buffer kit (Agilent Technologies, Inc., Santa Clara, CA, USA), then scanned in a microarry scanner using Agilent scan control software version 8.1 (Agilent Technologies, Inc., Santa Clara, CA, USA), and data were extracted with Feature Extraction software (version 10.7; Agilent Technologies, Inc.). For advanced data analysis, all biological replicates were pooled and calculated to identify differentially expressed lncRNAs, based on the threshold of a fold change of ≥2 and P≤0.05. A hierarchical clustering heat map of the lncRNA expression profile was produced using fold changes in lncRNA expression. In addition, in order to determine the potential roles of differentially expressed lncRNAs, Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analyses were both applied. Enrichment for GO terms was analyzed using GOEAST software 20 (http://omicslab.genetics.ac.cn/GOEAST/). Enrichment for KEGG pathways using the KOBAS 3.0 Annotation System (http://kobas.cbi.pku.edu.cn).

LncRNA ENSRNOG00000037522 was identified and then its role was investigated using small interfering (si)RNA transfection experiments. The primary podocytes were transfected with siRNA targeting ENSRNOG00000037522. The negative control siRNA and two siRNAs against lncRNA ENSRNOG00000037522, namely siRNA1 and siRNA2, were designed by RiboBio Co., Ltd.. The sequences were as follows: siRNA1 sense, 5′-CCCAGCAUUCCAGCAUCUU-3′, and anti-sense, 5′-AAGAUGCUGGAAUGCUGGG-3′; siRNA2 sense, 5′-GCAUUCCAGCAUCUUACCU-3′, and antisense, 5′-AGGUAAGAUGCUGGAAUGC-3′. Briefly, podocytes were plated into 24-well plates at a density of 1×106 cells per well and grown overnight at room temperature, followed by addition of DMEM/F12 medium (Gibco; Thermo Fisher Scientific, Inc.) the following day. The podocytes were then transfected with control or ENSRNOG00000037522 siRNAs for 24 h, using Lipofectamine 2000 (Invitrogen; Thermo Fisher Scientific, Inc.) according to the manufacturer's protocol. Subsequent to transfection, the podocytes were grown for 72 h at 37°C and washed three times with PBS. The cells were then recovered in DMEM/F12 medium (Gibco; Thermo Fisher Scientific, Inc.) for 2 h and collected for use in subsequent experiments. The silencing efficiency was confirmed by reverse transcription-quantitative polymerase chain reaction (RT-qPCR), and all reactions were performed in triplicate.

RNA extraction and RT-qPCR analysis

Total RNA was isolated from podocytes using TRIzol reagent (Invitrogen; Thermo Fisher Scientific, Inc.), and the quantity and purity of the RNA were determined by optical density measurements at an A260/A280 ratio of ≥1.8 using a NanoDrop 2000 spectrophotometer (Thermo Fisher Scientific, Inc.). Next, cDNA was synthesized using HiScript Q RT SuperMix for qPCR (Vazyme Biotech Co., Ltd., Nanjing, China) according to the manufacturer's protocol. The SYBR Green-based qPCR reaction system consisted of a final volume of 20 µl, containing 2 µl cDNA, 10 µl SYBR-Green Mix (Takara Bio, Inc., Otsu, Japan), 4 µl primer mix and 4 µl ddH2O. The qPCR reaction was performed at 95°C for 5 min, followed by 30 cycles of 95°C for 30 sec and 50°C for 30 sec. Primers targeting lncRNAs were designed and synthetized by Thermo Fisher Scientific, Inc., and the sequences of the primers used are listed in Table I. The lncRNA expression levels were quantified using the 2−ΔΔCq method (29), with GAPDH serving as the endogenous reference gene.

Table I.

Sequences of the primers used in quantitative polymerase chain reaction.

Name Sequences (5′–3′)
ENSROG00000011753 F: GGTGTTACGCTGGTCTTCCA
R: ACCTGTCCTCATCCAAACCC
ENSROG00000050935 F: CGCAGAAGGTAACCTCCGTA
R: TTTTTGGACCCGTCGCTTCT
LOC498759 F: ATGGAAGTGTGCAAGTCCTCA
R: TCAGGCAAACGAGCACTCAC
ENSROG00000031644 F: CTTAAGGATGCCTGGGCGAA
R: CACATCAGCCACTGGGTAGT
ENSROG00000048366 F: CAATGGACGGCCATCGTTCT
R: AGGAAAGACCTTGTGAGGCAC
ENSROG00000039080 F: CGGCAAGGGAAGGTCAATCA
R: GAAGGCCTCAGTGGGTTTGT
ENSROG00000037522 F: CTCCCCAATCACCCAGCATTC
R: AGCGGGCTTTCTCTTTAATATGCT
GAPDH F: GCAAGAGAGAGGCCCTCAG
R: TGTGAGGGAGATGCTCAGTG
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F, forward; R, reverse.

Statistical analysis

Each experiment was performed three times. Student's t-test or one-way analysis of variance was used to analyze the data using SPSS version 19.0 software (IBM Corp., Armonk, NY, USA). All results were summarized and are presented as the mean ± standard deviation. P<0.05 was considered to indicate a difference that was statistically significant.

Results

Diabetes promotes EMT in rat kidneys

Rat blood glucose was monitored at 24, 48 and 72 h after STZ injection, and the results are shown in Table II. STZ-injected rats with blood glucose levels of ≥16.7 mmol/l were considered to be diabetic. Analysis at 24 h after STZ injection indicated that the blood glucose level had increased significantly as compared with the control rats, and continued to be elevated throughout the measurement period, which indicated that diabetes was established successfully in the STZ-injected rats.

Table II.

Blood glucose (mmol/l) in different groups of Sprague Dawley rats (n=12).

Group 24 h 48 h 72 h
Control 6.77±0.25 6.77±0.09 6.73±0.33
STZ-injected 23.53±1.06a 25.03±1.46a 25.30±1.22a
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a

P<0.05 vs. the control group. STZ, streptozocin.

In order to investigate the effects of diabetes on the EMT and the expression of PODXL1 in kidney tissues, an immunohistochemical assay was used to determine the expression levels of the mesenchymal phenotypic markers α-SMA and vimentin, the epithelial marker nephrin and the podocyte-specific marker PODXL1. Yellow or brown staining was observed in cells that were positive for α-SMA, vimentin, nephrin or PODXL1, while the nuclei were stained blue. The immunohistochemistry results demonstrated that expression of α-SMA and vimentin was almost absent in the control tissues, whereas these markers were highly expressed in diabetic kidneys. By contrast, PODXL1 and nephrin were intensely expressed in the control rats, whereas they were markedly downregulated in the kidney tissues following STZ injection (Fig. 1).

Figure 1.

Figure 1

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Protein expression of α-SMA, vimentin, PODXL1 and nephrin, as examined by immunohistochemical assay. The α-SMA and vimentin expression levels were almost absent in the control group, but were highly expressed in diabetic kidneys at 1 and 6 weeks. However, PODXL1 and nephrin were intensely expressed in the control rats, but markedly downregulated in the kidneys following STZ injection. All experiments were performed in triplicate, and representative immunohistochemistry images are shown. α-SMA, α-smooth muscle actin; PODXL1, podocalyxin-like 1; STZ, streptozocin.

Diabetes promotes kidney injury

At 1 or 6 weeks after STZ injection, the kidney function and injury were assessed by measuring the serum CysC, serum β2-MG, UmAlb and BUN levels. The serum CysC level was 0.53±0.21 µg/ml in the control group, which was significantly increased to 0.76±0.04 µg/ml at 1 week after STZ injection and continued to increase after 6 weeks in the diabetic group (Fig. 2A). The serum β2-MG, UmAlb and BUN levels were not significantly different between the control and 1 week diabetic groups, but were significantly increased in diabetic rats at 6 weeks after STZ injection (Fig. 2B–D). These data indicated that kidney injury was induced by STZ stimulation and was exacerbated in diabetic rats after 6 weeks.

Figure 2.

Figure 2

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(A) Serum CysC, (B) serum β3-MG, (C) UmAlb and (D) BUN concentrations were determined by ELISA. These factors were increased in diabetic rats compared with the control rats. All measurements were performed in triplicate, and the results are presented as the mean ± standard deviation. *P<0.05 vs. control group. CysC, cystatin C; β2-MG, β2-microglobulin; UmAlb, urine microalbumin; BUN, blood urea nitrogen.

Next, glomeruli were isolated from the kidney tissues to obtain podocytes. Podocyte growth was detected by cell morphological observation at day 3, 5 and 7 after culture. Subsequent to STZ injection, podocytes demonstrated foot process effacement, vacuolar degeneration and detachment (Fig. 3). In order to further confirm the process of EMT in diabetic rats, western blot analysis was performed to detect the expression levels of α-SMA, vimentin, nephrin and PODXL1. The results revealed that the expression levels of nephrin and POXLD1 were significantly decreased in the podocytes of diabetic rats when compared with those in the control rats (P<0.05; Fig. 4). By contrast, the expression levels of α-SMA and vimentin were markedly upregulated in the podocytes of diabetic rats, as compared with those of the control rats (Fig. 4). These findings indicate that STZ-induced podocyte-specific depletion of nephrin and PODXL1 leads to the aggravation of kidney injury in diabetic rats.

Figure 3.

Figure 3

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Morphology of podocytes on days 3 and 5 after incubation, and on day 7 after subculture was observed under a microscope (magnification, ×100). Scale bar, 50 µm. All experiments were performed in triplicate, and representative images are shown.

Figure 4.

Figure 4

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Nephrin, PODXL1, vimentin and α-SMA protein expression levels in the podocytes of diabetic and control rats were examined with western blot analysis. All experiments were performed in triplicate, and the results are presented as the mean ± standard deviation. *P<0.05 vs. control group. PODXL1, podocalyxin-like 1; α-SMA, α-smooth muscle actin.

Differential expression of lncRNA in diabetic podocytes

To explore the potential function of lncRNAs during DN, a microarray analysis of the podocytes obtained from STZ-induced diabetic and control rats at 6 weeks was conducted. A total of 88 upregulated and 15 downregulated lncRNAs were identified between the two groups (data not shown). Heat map hierarchical clustering revealed distinct lncRNA expression profiles between the two groups (Fig. 5). Furthermore, the GO categories comprised three structured networks, including biological processes, the cellular component and the molecular function (Fig. 6). The GO analysis also indicated that differentially expressed lncRNAs were mainly involved in the cell, cell part, binding and cellular process (Fig. 6). Subsequently, KEGG pathway analysis was performed to ascertain the functions of the differentially expressed lncRNAs. The results suggested that 'pathways in cancer' were significantly enriched among these lncRNAs, and the three most enriched pathways included 'pathways in cancer', the 'PI3K-Akt signaling pathway' and 'microRNAs in cancer' (Fig. 7). Several of these pathways were linked to the EMT, such as the 'PI3K-Akt signaling pathway'. In order to verify the expression of the dysregulated lncRNAs, seven most upregulated lncRNAs from differentially expressed lncRNAs were selected for further investigation. The RT-qPCR results revealed variations in lncRNA expression in the podocytes of the STZ group, compared with that of the control group podocytes. As shown in Fig. 8A, there was a significant difference in the expression of the lncRNA ENSRNOG00000037522, ENSRNOG00000050935 and LOC498759 between the two groups.

Figure 5.

Figure 5

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Hierarchical clustering heat map revealing the distinct lncRNA expression profiles in the podocytes of the control and STZ-treated diabetic rats. After 6 weeks, the podocytes were obtained from control and STZ-treated diabetic rats and hierarchical clustering analysis was performed. The relative lncRNA expression is depicted according to the color scale. The red column indicates upregulation and the green column indicates downregulation. lncRNA, long noncoding RNA; STZ, streptozocin. Control 1, 2 and 3 indicated three representative podocytes samples from control rats; STZ 1, 2 and 3 indicated three representative podocytes samples from STZ-treated diabetic rats.

Figure 6.

Figure 6

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GO analysis of differentially expressed lncRNAs between the control and STZ-treated diabetic rats. Three domains were covered, including cellular component, molecular function and biological process. The GO analysis indicated that differentially expressed lncRNAs were mainly involved in the cell, cell part and cellular process. GO, Gene Ontology; lncRNA, long noncoding RNA; STZ, streptozocin.

Figure 7.

Figure 7

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Kyoto Encyclopedia of Genes and Genomes pathway analysis of differentially expressed lncRNAs between the control and STZ-treated diabetic rats. The three most enriched pathways were 'pathways in cancer', 'PI3K-Akt signaling pathway' and 'microRNAs in cancer'. lncRNA, long noncoding RNA; STZ, streptozocin.

Figure 8.

Figure 8

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(A) RT-qPCR was used to validate the 7 selected lncRNAs transcripts. *P<0.05 vs. control group. (B) Subsequent to treatment of podocytes with high glucose, RT-qPCR validation was performed for the 7 selected lncRNA transcripts. lncRNA ENSRNOG00000037522 was the most upregulated lncRNA in podocytes from the high glucose treatment group compared with the normal group. *P<0.05 vs. normal cells. All experiments were performed in triplicate, and the results are presented as the mean ± standard deviation. lncRNA, long noncoding RNA; RT-qPCR, reverse transcription-quantitative polymerase chain reaction.

High glucose induces lncRNA expression in diabetic podocytes

To confirm the expression of the 7 selected lncRNAs, high glucose (30 mmol/l) was used to stimulate podocytes. Subsequently, RT-qPCR was performed to detect the mRNA expression levels of the 7 lncRNAs in normal podocytes and high glucose-stimulated podocytes. The results were in accordance with the microarray data. As shown in Fig. 8B, the lncRNA ENSRNOG00000037522 was the most upregulated lncRNA in podocytes from the high glucose group compared with those of the normal group. Consequently, these observations indicated that high glucose induced the expression of lncRNA ENSRNOG00000037522 in diabetic podocytes, and this lncRNA was selected for further investigation.

Knockdown of lncRNA ENSRNOG00000037522 inhibits podocyte EMT

Considering that the lncRNA ENSRNOG00000037522 level was increased after high-glucose stimulation, transfection with two siRNAs was applied to knockdown lncRNA ENSRNOG00000037522. The knockdown efficiency was confirmed by RT-qPCR, which revealed a marked reduction in lncRNA ENSRNOG00000037522 levels subsequent to siRNA1 and siRNA2 transfection (Fig. 9A). The western blot analysis results also demonstrated that the expression levels of PODXL1 and nephrin were significantly increased, whereas the α-SMA and vimentin expression levels were decreased following siRNA transfection (Fig. 9B and C). These aforementioned observations indicate that the knockdown of lncRNA ENSRNOG00000037522 influenced the EMT in podocytes by downregulating vimentin and upregulating nephrin.

Figure 9.

Figure 9

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(A) The knockdown efficiency of the lncRNA ENSRNOG00000037522 was examined with reverse transcription-quantitative polymerase chain reaction, and a significant abrogation of lncRNA ENSRNOG00000037522 was observed following transfection with siRNA1 or siRNA2. (B) Western blot analysis was conducted to determine the α-SMA, vimentin, nephrin and POXLD1 expression levels in lncRNA ENSRNOG00000037522 knockdown and control podocytes. (C) Protein levels were quantified by ImageJ software and are presented in the histogram. Podocytes transfected with NC siRNA served as the controls. All experiments were performed in triplicate, and the results are presented as the mean ± standard deviation. *P<0.05 vs. NC group. lncRNA, long noncoding RNA; NC, negative control; siRNA, small interfering RNA.

Discussion

DN is a common kidney disease caused by hyperglycemia that can lead to angiopathy of the glomerular capillaries (30). Glomerular endothelial cells, the glomerular basement membrane and podocytes constitute the filtration barrier. Podocytes form the final barrier to protein loss and podocyte dysfunction allows penetration into the other slit structures (9,31). Numerous studies have suggested that podocyte depletion is responsible for the onset of proteinuria, and the EMT has been proposed to be a possible engagement for podocyte depletion in DN (7,13,14,32,33).

In the present study, it was demonstrated that podocytes were damaged in the kidneys of rats with STZ-induced diabetes, while the downregulation of PODXL1 and nephrin expression levels, as well as the upregulation of α-SMA and vimentin expression levels were observed. Nephrin is the first protein to be identified at the glomerular podocyte slit diaphragm and its expression has been described to be transiently increased in the first 8 weeks subsequent to the establishment of a diabetes animal model. The downregulation of nephrin expression was identified in the kidneys of type 1 and type 2 diabetes patients (34). In addition, nephrin is a podocyte-specific protein; thus, a reduction in its expression may reflect podocyte loss in diabetic rats, and this loss can lead to a range of renal diseases, including DN (35). Podocalyxin (PODX) is expressed by kidney podocytes, vascular endothelia and a subset of neurons (36). Aberrant expression of PODX contributes to podocyte-associated renal diseases (37). PODXL1 is an anti-adhesive transmembrane protein that has been reported to be expressed on the foot processes of podocytes in the kidney glomerulus, as well as on the endothelium at certain sites (36). The results of the present study revealed that PODXL1 expression was decreased in diabetic rats following STZ injection, which is consistent with the observations of a previous study (38).

The levels of several serum and urine response factors, including serum CysC, UmAlb, serum β2-MG and BUN, were also examined in the present study and were observed to be increased in diabetic rats. Serum CysC and β2-MG have been reported to be increased in kidney injury (39,40). Notably, serum CysC is superior to serum creatinine for the diagnosis of early diabetic nephropathy, and an elevated serum CysC concentration is a strong predictor of DN (41). Therefore, in the present study serum CysC was found to be increased at 1 and 6 weeks after STZ injection, whereas UmAlb, serum β2-MG and BUN levels were significantly increased only at 6 weeks after STZ injection. It is, thus, speculated that the downregulation of PODXL1 and nephrin expression in podocytes leads to elevated levels of urine response factors, thereby aggravating kidney injury.

Numerous studies have been published recently on the functional roles of lncRNAs in DN. For instance, Zhou et al (42) identified that the lncRNA MIAT served an essential role in high glucose-induced renal tubular epithelial injury in a rat model of diabetes. Wang et al (25) also demonstrated that the CYP4B1-PS1-001 lncRNA inhibited the proliferation and fibrosis of mouse mesangial cells during the early stages of DN. In addition, Beltrami et al (43) reported that LipcRNAp21 lncRNA was associated with diabetes-induced vascular complications. Hu et al (44) observed that MALAT1 lncRNA served a pivotal role in DN and high glucose-induced podocyte damage. According to the aforementioned findings, a microarray profiling analysis of the differential expression of lncRNAs in diabetic rats was conducted in the current study. It was determined that lncRNA ENSRNOG00000037522 was significantly upregulated in the STZ-induced DN group compared with the control group. It was further confirmed that STZ- or high glucose-induced podocyte EMT occurred via the upregulation of lncRNA ENSRNOG00000037522, and was accompanied by the downregulation of PODXL1 and nephrin expression and the upregulation of α-SMA and vimentin expression. In addition, lncRNA ENSRNOG00000037522 knockdown repaired podocyte damage via the downregulation of α-SMA and vimentin, and the upregulation of PODXL1 and nephrin expression levels.

EMT is an important biological process during the development of DN, and podocytes undergoing EMT lose the phenotypic characteristics of epithelial cells, exhibiting reduced nephrin and PODX expression, while they also express phenotypic markers of mesenchymal cells, including α-SMA and vimentin (10). Nevertheless, the mechanisms that mediate podocyte EMT remain poorly understood. Given that α-SMA and vimentin are markers of mesenchymal cells, their expression levels were observed to be increased in high glucose-induced EMT in podocytes in the current study, which was consistent with the findings of a previous study (27). These results indicate that α-SMA and vimentin are essential for STZ-induced EMT, and it is speculated that STZ-induced EMT leads to the loss of functional proteins, which, in turn, damage the function and structure of podocytes. However, further research is required to investigate whether influencing the EMT is an efficient treatment strategy for DN.

In the current study, GO and KEGG pathway analyses were also used to identify the potential functions of the differentially expressed lncRNAs. Several terms in the GO results were involved in the EMT process, including the cellular process term. The KEGG pathway analysis also revealed that numerous pathways were associated with the EMT, including the 'PI3K-Akt signaling pathway'. It has been reported that the PI3K-Akt signaling pathway is essential in the process of EMT, and inhibition of this signaling pathway was able to reduce podocytes damage (45). These results indicated the general role of ENSRNOG00000037522 in STZ-induced EMT and podocyte damage.

In conclusion, the expression of the lncRNA ENSRNOG00000037522 was upregulated in the kidneys of rats with STZ-induced diabetes. Furthermore, the results indicated that the inhibitory effects of lncRNA ENSRNOG00000037522 on high glucose-induced podocyte EMT may provide further evidence for the prevention and treatment of DN by targeting lncRNA ENSRNOG00000037522.

Acknowledgments

The present study was supported by the Youth Science Fund Project of National Natural Science Fund of China (grant no. 81400818) and the Provincial Natural Science Foundation of Guangdong (grant no. 2017A030313783).

Footnotes

Competing interests

The authors declare that they have no competing interests.

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