Table 3.
Summary of threshold-based results (APD3 dataset)
| Tool | TP | FP | FN | TN | Total | Sens (%) | Spec (%) | Prec (%) | Bal Acc (%) |
|---|---|---|---|---|---|---|---|---|---|
| CAMPR3(RF) | 1624 | 1419 | 89 | 7146 | 10278 | 94.80 | 83.43 | 53.37 | 89.11 |
| CAMPR3(SVM) | 1552 | 1578 | 161 | 6987 | 10 278 | 90.60 | 81.58 | 49.58 | 86.09 |
| ADAM | 1560 | 3292 | 153 | 5273 | 10 278 | 91.07 | 61.56 | 32.15 | 76.32 |
| MLAMP | 1295 | 1901 | 418 | 6664 | 10 278 | 75.59 | 77.81 | 40.52 | 76.70 |
| DBAASP | 1076 | 715 | 637 | 7850 | 10 278 | 62.81 | 91.65 | 60.08 | 77.23 |
| AMPA | 671 | 862 | 1042 | 7703 | 10 278 | 39.17 | 89.94 | 43.77 | 64.55 |
| AntiBP2 | 963 | 5350 | 483 | 1880 | 8676 | 66.59 | 26.00 | 15.25 | 46.30 |
| BAGEL3 | 133 | 0 | 21 | 770 | 924 | 86.36 | 100.0 | 100.0 | 93.18 |
| BACTIBASE | 60 | 0 | 94 | 770 | 924 | 38.96 | 100.0 | 100.0 | 69.48 |