Table 4.
Low-cell-input experiments
| MSE | Pearson’s R | AUPRC | |
|---|---|---|---|
| ULI-NChIP | |||
| H3K4me3 | −61% (1.39, 0.54) | +208% (0.13, 0.41) | +61% (0.24, 0.38) |
| H3K9me3 | −46% (0.51, 0.27) | +28% (0.41, 0.53) | +32% (0.28, 0.36) |
| H3K27me3 | −41% (0.68, 0.40) | +57% (0.34, 0.54) | +32% (0.34, 0.45) |
| MOWChIP | |||
| H3K4me3 | −42% (1.18, 0.68) | +122% (0.14, 0.31) | +34% (0.19, 0.25) |
| H3K27ac | −21% (1.44, 1.14) | +159% (0.09, 0.24) | +66% (0.15, 0.24) |
We report improvement of the denoised model output over baseline (original low-input experiments), when compared with high-input experiments. In parentheses we report the baseline results followed by the denoised results.