Abstract

Catalytic carbene transfer to olefins is a useful approach to synthesize cyclopropanes, which are key structural motifs in many drugs and biologically active natural products. While catalytic methods for olefin cyclopropanation have largely relied on rare transition-metal-based catalysts, recent studies have demonstrated the promise and synthetic value of iron-based heme-containing proteins for promoting these reactions with excellent catalytic activity and selectivity. Despite this progress, the mechanism of iron-porphyrin and hemoprotein-catalyzed olefin cyclopropanation has remained largely unknown. Using a combination of quantum chemical calculations and experimental mechanistic analyses, the present study shows for the first time that the increasingly useful C=C functionalizations mediated by heme carbenes feature an FeII-based, nonradical, concerted nonsynchronous mechanism, with early transition state character. This mechanism differs from the FeIV-based, radical, stepwise mechanism of heme-dependent monooxygenases. Furthermore, the effects of the carbene substituent, metal coordinating axial ligand, and porphyrin substituent on the reactivity of the heme carbenes was systematically investigated, providing a basis for explaining experimental reactivity results and defining strategies for future catalyst development. Our results especially suggest the potential value of electron-deficient porphyrin ligands for increasing the electrophilicity and thus the reactivity of the heme carbene. Metal-free reactions were also studied to reveal temperature and carbene substituent effects on catalytic vs noncatalytic reactions. This study sheds new light into the mechanism of iron-porphyrin and hemoprotein-catalyzed cyclopropanation reactions and it is expected to facilitate future efforts toward sustainable carbene transfer catalysis using these systems.
Introduction
Cyclopropanes are key structural motifs in many pharmaceuticals and biologically active molecules,1−5 which underscores the high synthetic values of catalytic methods for olefin cyclopropanation via carbene transfer.6−9 Metalloporphyrin systems have represented attractive catalysts for this type of reactions and major efforts in this area have focused on metalloporphyrins incorporating noble metals, such as Rh,10−14 Ru,15−21 Os,22−25 and Ir,14,26−28 owing to the well-known reactivity of second- and third-row transition metals in carbene transfer reactions.6−9 More recently, the successful development and application of Fe-29−37 and Co-porphyrins38−45 in cyclopropanation reactions have highlighted the potential of exploiting earth-abundant and inexpensive first-row transition metals for this important class of carbon–carbon bond forming reactions. Furthermore, very recent studies have revealed how iron-based, heme-dependent enzymes and proteins, such as cytochrome P45046−49 and myoglobins,14,50−52 constitute promising biocatalysts for carbene-mediated cyclopropanation reactions. In particular, excellent enantioselectivity (>90–99% ee) along with high catalytic activity (>10,000 turnovers (TON)) and broad substrate scope, have been recently achieved in olefin cyclopropanations using engineered myoglobin variants.50,51 These biocatalysts could be applied to the stereoselective synthesis of cyclopropane-containing drugs on a multigram scale outperforming current strategies to access these molecules.51 In addition to cyclopropanation reactions, myoglobins and other hemoproteins have proven useful for promoting a growing number of carbene-mediated transformations, including carbene insertion into Y–H bonds (Y = N, S, Si, C),53−57 aldehyde olefinations,58 and sigmatropic rearrangements.59
Although iron porphyrin carbenes (IPCs) were implied in the aforementioned carbene-mediated transformations and in some cases directly shown to undergo cyclopropanation,31 the mechanism of cyclopropanation reactions catalyzed by hemoproteins and, more generally, FeII-porphyrins remains unknown. In biocatalytic cyclopropanations catalyzed by heme dependent proteins, the ferrous species was indeed determined to be the catalytically competent form of the metalloprotein.47,51 On the other hand, investigations of cyclopropanations with formally ferric iron-porphyrins suggest in situ reduction of the metalloporphyrin and thus the active role of FeII-porphyrin carbene in these reactions.29,32,36 Computationally, several different mechanisms have been proposed for metal carbene cyclopropanations, including elimination from metallocyclobutane60−62 and addition via both concerted63−65 and stepwise66,67 pathways. Because both the metal center and ligand environment greatly influence the operating mechanism, it is critical to study the mechanism in newly developed systems such as the hemoprotein and FeII-porphyrin-based catalysts investigated here. Building on our recent progress in developing DFT methods for accurate predictions of FeII-porphyrin carbenes’ experimental X-ray crystal structures, Mössbauer and NMR properties and IPC formations and C—H insertions,68−70 here we report the first quantum chemical investigation of heme carbene-mediated cyclopropanation mechanism. The mechanistic model derived from our computational analyses is supported by experiments with isotopically labeled probe substrates and radical spin trapping reagents. In addition, this study performs the first systematic analysis of the effects of carbene substituent, protein axial ligand, and porphyrin substituent on cyclopropanation reactions. This study provides a mechanistic basis for explaining experimentally observed reactivity trends as well as key insights for guiding future development of iron-porphyrin-based (bio)catalysts for carbene-mediated cyclopropanations.
Results and Discussion
Cyclopropanation Mechanism
The information of IPC’s electronic nature is critical to understand its reactivity. Previously, a decade-long debate has concerned whether IPC is best described as FeII ← {:C(X)Y}0 or FeIV={C(X)Y}2–.31,32,71−74 The FeIV-based resonance structure, which is isoelectronic and analogous to the FeIV=O2– group involved in cytochrome P450-catalyzed monooxygenation reactions, was discussed in IPC studies31 and it was proposed to mediate olefin cyclopropanations by engineered P450s and hemoproteins.46,50 However, our recent studies68,69 show that it is the FeII-based and not the FeIV-based resonance structure that yields more accurate predictions of experimentally determined Mössbauer, X-ray, and NMR properties of IPCs, with calculated charges being consistent with the experimentally found electrophilic reactivity of this species.29,31,32,50,75 Challenging this view, a more recent computational study on iron-porphyrin catalyzed N–H insertion proposes that a diradical, antiferromagnetically coupled FeIII{·C(X)Y}− complex with an open-shell singlet (OSS) state is the most favored and thus the relevant IPC intermediate implicated in the carbene transfer process.76 Indirect support to the proposed carbon-centered radical catalytic intermediate was drawn from previous studies describing a radical mechanism for Co-porphyrin-catalyzed cyclopropanation66,77 and other (nonheme) systems,78−80 albeit such claim was not verified experimentally. This mechanistic proposal is reminiscent of the radical nature of P450-catalyzed C—H hydroxylation and epoxidation of certain olefins.81 The FeIV=O2– species itself exhibits a radical feature as indicated by ∼0.9 e spin density of the oxygen atom bound to formal FeIII.82,83 At the same time, the FeIII-based OSS ground state does not appear to be fully consistent70 with the FeII feature of isolated IPCs characterized by UV/vis and NMR spectroscopies,72,73 X-ray crystallography,31,72,84 and XANES, which is directly sensitive to the Fe oxidation state.84 In light of these divergent views and proposals about the electronic structure of IPCs involved in carbene transfer reactions and the unknown mechanism of hemoprotein-catalyzed cyclopropanation, we set to investigate this reaction through a combination of computations and experiments.
To this end, we initially investigated the cyclopropanation reaction involving styrene and the iron-porphyrin complex [Fe(TPFPP)(C(Ph)CO2Et)] (TPFPP = meso-tetrakis(penta-fluorophenyl)porphyrinato dianion), which was previously reported by Che and co-workers.31 In this reaction (referred to as reaction 1), two different pathways were considered and evaluated, namely an FeII-based concerted pathway (in blue) and an FeIII-based radical stepwise pathway (in red) as shown in Scheme 1. The TPFPP was modeled as a nonsubstituted porphyrin (Por) as done previously.68,69 Experimental spin states of iron-containing reactant R1(1) and product P1(1) (here the number in parentheses after the reaction species symbol indicates the reaction number used in this work) are singlet and triplet respectively,31,85 which were well reproduced in our recent studies of other related chemical reactions.69,70 To determine the favored spin state for the transition state, both singlet and triplet pathways were considered. We first investigated the concerted mechanism. Transition states leading to both the trans and cis product were obtained. Only the pathways leading to trans-1R,2S and cis-1R,2R cyclopropanes were studied, as the other two possible products are mirror images of these isomers.
Scheme 1. Target Cyclopropanation Reactions.

(A) Concerted and stepwise pathway for FeII-porphyrin catalyzed cyclopropanation of styrene. Oval represents the porphyrin ligand. (B) Reactions 1-9 involving different reactants (R1).
Our results show that the singlet transition state is less favorable than the triplet transition state (see Table S4), which features a FeII (S = 1) center with nonradical character for carbene, styrene, and porphyrin based on the calculated negligible spin densities reported in Table S5. Using broken-symmetry initial setups of FeIII ferromagnetically and antiferromagnetically coupled with carbene radical for triplet and singlet transition states, respectively, led to basically the same FeII-based results after geometry optimizations, suggesting the dominant FeII feature for the concerted mechanism. The smaller ΔG‡ value for the pathway leading to the trans product (18.58 kcal/mol) compared to that yielding the cis isomer (20.75 kcal/mol) is consistent with the experimentally found trans selectivity of the reaction.31 This selectivity may be a result of favorable π–π interactions between the phenyl rings of the carbene moiety and styrene and one more short attractive O···H interaction as illustrated in Figure 1A and 1B.
Figure 1.

(A) TStrans; (B) TScis; (C) TS1trans; (D) TS1cis in reaction 1. Atom color scheme: Fe, black; C, cyan; N, blue; O, red; H, gray.
For the stepwise mechanism (red, Scheme 1), the first transition state, TS1(1), which is the bottleneck step compared to TS2(1) in Co porphyrin cyclopropanation,66 was obtained for both trans and cis isomers. Interestingly, in this case, with initial setups of ferric center and radical carbene/styrene, the optimized structures maintain some radical feature. For instance, the C3 carbon atom (see Scheme 1 for atomic labels) has spin densities of 0.280 and 0.384 e for triplet TS1trans(1) and TS1cis(1), and it has even larger spin densities of −0.531/–0.567 e in the corresponding singlet TS1trans(1) and TS1cis(1) (Table S5). The iron spin densities of 1.373/1.375 e in these singlet transition states coupled with −0.813/-0.809 e spin densities of the carbene carbon atom suggest an FeIII-based OSS feature, whereas the iron spin densities of ∼1.9 e and carbene carbon spin densities of ∼0.1 e in the triplet transition states indicate a major FeII feature. For the radical pathway, the FeIII-based OSS transition states are more favorable than the FeII triplet states by 3–8 kcal/mol (Table S4) and more favorable than the FeII-based CSS transition states leading to the trans and cis products by 9.10 and 12.67 kcal/mol (ΔΔG‡), respectively, which make them indeed the most favorable states for this stepwise mechanism. Regarding the geometries of these FeIII-based OSS, there is only one short distance between the carbene carbon and the α and β carbons of styrene (RC1C2 ∼ 2.2 Å, RC1C3 ∼ 3.1 Å), as shown in Figure 1C,D and Table S5, and as expected for the stepwise attack. Interestingly, the ΔG‡ difference between trans and cis transition states in this stepwise pathway is only 0.8 kcal/mol, which is smaller than the ∼2 kcal/mol difference in the concerted pathway and is similar to 0.3 kcal/mol difference for styrene radical cyclopropanation catalyzed by Co-porphyrin. As shown in Figure 1C,D, the aromatic ring of styrene adopts a conformation parallel to the plane of the porphyrin ring, which differs from the tilted conformation observed in the concerted pathway (Figure 1A,B). In this radical stepwise mechanism, initial conformations analogous to those observed in the concerted pathway and initial conformations in which the phenyl ring is perpendicular to the porphyrin ring were also investigated. In all cases, all conformations converged to that observed in the concerted pathway after geometry optimization. This suggests a preference for the concerted pathway. In fact, the ΔG‡ values for both TS1trans(1) and TS1cis(1) in this stepwise pathway are higher than the corresponding TStrans(1) and TScis(1) in the concerted pathway by 4–7 kcal/mol (Table S6). The electronic energies, zero-point energy corrected electronic energies, and enthalpies exhibit the same trend, which clearly indicate that the radical, stepwise pathway is unfavorable compared to the concerted pathway. Based on these results, subsequent steps in the unfavorable, radical pathway were not further considered and we focused our attention on the concerted pathway leading to the trans cyclopropanation product, which is the favored product in the presence of synthetic iron porphyrin catalysts30 and myoglobins.50,51
As illustrated by the data in Figure 2-1, charge analysis shows a significant charge transfer (CT) from the olefin substrate to the carbene moiety, a result consistent with the experimentally determined electrophilicity of the latter.31,50 As shown in Figure 3-1, the most significant geometric change at the transition state TStrans(1) relative to the reactants is the elongation of the Fe-carbene distance (RFeC1) by about ∼0.5 Å to accommodate attack of the carbene group on the C=C bond of styrene. At this step, both the elongation of the C=C bond (RC2C3) and the change in the bond angle between the carbene substituents (Ph—C—CO2Et) are modest (0.013 Å and 4.2°, respectively). These minor structural changes along with the 117.6° value for the Ph—C—CO2Et bond angle indicate that the carbene carbon in the transition state is still largely sp2-hydridized as in the reactant, rather than exhibiting sp3 geometry as in the product. Altogether, these structural features suggest that this is an early transition state. Furthermore, a difference of about 0.3 Å between the C1···C2 and C1···C3 distances indicate the nonsynchronous character of the carbene addition process to the olefin, as illustrated in Figure 3-1.
Figure 2.
(1–9) Atomic charge changes from reactants to transition state (in black) and charge transfers (in blue) as indicated by arrows and numbers in parentheses in reactions 1–9.
Figure 3.
(1–9) Key geometric parameters at transition state (in black) and changes from reactants to transition state (in blue) in reactions 1–9. Atom color scheme: Fe, black; O, red; C, cyan; H, gray; F, purple; S, yellow.
To verify these predictions experimentally, mechanistic studies were performed using styrene (1a) as the olefin substrate, ethyl diazoacetate (EDA, 2) as the carbene donor, and iron-tetraphenyl porphyrin (Fe(TPP)), hemin (iron-protoporphyrin IX or Fe(ppIX)), or myoglobin (Mb) as the catalyst. As for the biocatalysts, we evaluated both wild-type sperm whale Mb and its engineered variant Mb(H64V,V68A), which displays significantly enhanced catalytic activity (>10,000 vs 180 TON for Mb) as well as excellent trans-(1S,2S)-diastereo- and enantioselectivity (>99% de and ee vs 86% de and 0% ee for Mb) in the cyclopropanation of vinylarenes with EDA.50 To investigate the occurrence of stepwise vs concerted mechanism, we initially carried out the cyclopropanation reactions in the presence of cis-β-deutero-styrene (1b, Table 1), which was meant to probe the formation of a carbon-centered radical intermediate (Int(1), Scheme 1). Indeed, a stereospecific reaction resulting in a cis configuration relative to the −D and −Ph group in the corresponding cyclopropanation product would be expected in the case of a concerted mechanism, whereas (partial) cis/trans isomerization would be revealing of the intermediacy of a radical species. Importantly, the isolated trans-2-phenyl-1-ethyl carboxylate cyclopropane products from the reactions catalyzed by Fe(TPP), wild-type Mb, and Mb(H64V,V68A) all consisted of the syn addition product 3a, as determined by 1H and 2H NMR spectroscopy (Table 1, Entries 1–2, 4). A detectable albeit negligible amount of diastereomer 3b (<2%) was observed with hemin (Entry 3). In stark contrast, a significant degree of cis/trans isomerization (39.7%) was obtained in the same reaction using Co(TPP) as the catalyst (Entry 5), a result that is consistent with the previously reported radical mechanism of Co(TPP)-catalyzed cyclopropanation.66,77 Importantly, the stereospecificity of the cyclopropanation reaction catalyzed by Fe(TPP) and the myoglobin variants strongly support a concerted, nonradical pathway for the cyclopropanation reaction catalyzed by iron-porphyrins.
Table 1. Biocatalytic and Chemocatalytic Cyclopropanation Reactions with cis-β-Deutero-styrene.
| Entry | Catalyst | Reaction Conditionsa | Yieldb | Ratio 3a:3bc | % isomeriz. |
|---|---|---|---|---|---|
| 1 | Mb(H64V,V68A) | A | 48% | 1:0 | 0% |
| 2 | Mb | A | 3% | 1:0 | 0% |
| 3 | Fe(ppIX) | A | 24% | 1:0.017 | 1.7% |
| 4 | Fe(TPP) | B | 14% | 1:0 | 0% |
| 5 | Co(TPP) | B | 5% | 1:0.66 | 39.7% |
Reaction conditions A: 200 mM 1, 400 mM EDA, 60 μM Mb variant (or hemin), 10 mM sodium dithionite in 50 mM potassium phosphate buffer (pH 7) containing 10% DMF, room temp., 16 h. Reaction conditions B: 0.475 mmol 1, 1.5 equiv EDA (slow addition), 5 mol % catalyst in CH2Cl2, 40 °C, 16 h.
Isolated yield for trans-configured product relative to Ph and CO2Et groups (racemic for all reactions except with Mb(H64V,V68A).
Based on peak integration in 2H NMR spectrum.
To further corroborate these conclusions, cyclopropanation reactions with styrene (1a) and EDA (2) were then carried out in the presence of the radical spin trapping agent 5,5-dimethyl-1-pyrroline N-oxide (DMPO). As shown in Table 2, no effect in product yield was observed for the reactions catalyzed by the myoglobin variants or hemin, in the presence of DMPO when compared to parallel reactions performed in its absence (Entries 1, 3, and 5 vs 2, 4, and 6, respectively). In stark contrast, a dramatic reduction in product yield (∼90% reduction) was observed for the Co(TPP)-catalyzed reaction upon addition of the radical trapping reagent (Entry 7 vs 8). These results thus agree with those obtained with cis-β-deutero-styrene in evidencing a nonradical mechanism for iron-porphyrin and hemoprotein-catalyzed cyclopropanation. As such, these studies provide strong experimental support to the proposed concerted mechanism for IPC-mediated cyclopropanation, as derived from our computational analyses. Furthermore, the small secondary kinetic isotope effect (KIE) determined for the Mb(H64V,V68A)-catalyzed cyclopropanation of styrene versus perdeuterated d8-styrene (kH/kD = 0.96 ± 0.02)50 suggests a minimal extent of rehybridization of the olefin carbon atoms in the transition state, which is consistent with the reagent-like early transition-state predicted by our computations (Figure 3-1). For this reaction, a KIE of 0.99 was obtained by computation, which is in excellent accord with the experimentally determined value (0.96).50
Table 2. Cyclopropanation Reactions in the Presence or Absence of Free-Radical Spin Trapping Agent.
| Entry | Catalyst | Reaction Conditionsa | DMPOb | Yieldc | % ded | % eed |
|---|---|---|---|---|---|---|
| 1 | Mb(H64V,V68A) | A | No | 86% | 99 | 99 |
| 2 | Mb(H64V,V68A) | A | Yes | 82% | 99 | 98 |
| 3 | Mb | A | No | 27% | 89 | 3 |
| 4 | Mb | A | Yes | 35% | 90 | 1 |
| 5 | Fe(ppIX) | A | No | 8% | 87 | 0 |
| 6 | Fe(ppIX) | A | Yes | 13% | 87 | 0 |
| 7 | Co(TPP) | B | No | 76% | 49 | 0 |
| 8 | Co(TPP) | B | Yes | 8% | 29 | 0 |
Reaction conditions A: 10 mM styrene, 20 mM EDA, 20 μM Mb variant (or hemin), 10 mM sodium dithionite in 50 mM potassium phosphate buffer (pH 7) containing 10% DMF, room temp., 16 h. Reaction conditions B: 0.24 mmol styrene, 1.5 equiv EDA (slow addition), 5 mol % Co(TPP) in CH2Cl2, 40 °C, 16 h.
With or without 10 equiv DMPO relative to styrene.
GC yield.
Diastereomeric (de) and enantiomeric excess (ee) for trans-(1S,2S) cyclopropane product.
Carbene Substituent Effect
With the basic mechanism of IPC-mediated cyclopropanation revealed above, we then extended our computational analyses to the study of the carbene substituent effect. We first examined the cyclopropanation of styrene with [Fe(Por)(CHCO2Et)] derived from EDA (reaction 2), a carbene donor reagent extensively investigated in hemoprotein-46,47,49−51 and iron-porphyrin-catalyzed cyclopropanations.29−33,36,37 Interestingly, the singlet transition state in this reaction is more favorable than the triplet state by ΔG of 1.02 kcal/mol. This effect may be attributed to the reduced steric hindrance of the CHCO2Et vs C(Ph)CO2Et moiety, which allows for a closer distance between the carbene carbon atom and Fe (∼0.5 Å) and thus a stronger field strength effect on the iron center, which favors the low spin state. Furthermore, the computed ΔG‡ for this step (12.47 kcal/mol) is significantly smaller (∼6 kcal/mol) than that for the corresponding transition state in the reaction with [Fe(Por)(C(Ph)CO2Et)] (reaction 1), indicating a more facile cyclopropanation reaction with the IPC intermediate derived from EDA. The elevated reactivity of the latter may arise from the increased charge transfer from the substrate to the carbene by 0.069 e due to shorter substrate-carbene distance (ΔRC1C2 of 0.229 Å and ΔRC1C3 of 0.240 Å).
To further investigate this aspect, we analyzed reaction 3, in which [Fe(Por)(CPh2)] is used as the carbene source. As shown in Table 3, the ΔG‡ for this reaction is higher than that in the reaction with [Fe(Por)(C(Ph)CO2Et)] by 1.16 kcal/mol. Therefore, the electron-withdrawing effect (EWG) of the CO2Et group in reaction 1 enhances the reaction rate as compared to the electron-donating phenyl group in reaction 3. This result is consistent with the substrate-to-carbene CT effect highlighted above, whereby the EWG group in the carbene moiety facilitates the reaction, as reflected by an increased CT of 0.029 e for the transition state involving [Fe(Por)(C(Ph)CO2Et)] vs [Fe(Por)(CPh2)] (Figure 2-1 vs 2-3). This result agrees with the experimentally observed higher reactivity of [Fe(TPFPP)(C(Ph)CO2Et)] compared to [Fe(TPFPP)(CPh)2] in stoichiometric cyclopropanations.31 However, the reactivity difference in these experiments is more pronounced than anticipated by our calculations, as indicated by the 82% yield (=82 TON) obtained with [Fe(TPFPP)(C(Ph)CO2Et)] and styrene, compared to the lack of reactivity for [Fe(TPFPP)(CPh)2] even at elevated temperatures and extended reaction times. We attribute this difference to the porphyrin substituent effect, which was absent in our initial calculations. We then calculated the cyclopropanation pathways using authentic [Fe(TPFPP)(C(Ph)CO2Et)] (reaction 4) and [Fe(TPFPP)(CPh)2] (reaction 5). As shown in Table 3, a similar trend was observed in these reactions but a significantly larger ΔΔG‡ (5.64 kcal/mol) was found for reaction 5 vs reaction 4. This result is thus more in line with the dramatic reactivity difference observed experimentally. Altogether, the computational analyses described above highlight the important role of the carbene substituent in affecting the reactivity of the IPC intermediate in cyclopropanation reactions.
Table 3. Key Energy, Charge, and Geometry Parametersa.
| Reaction | ΔG‡ (kcal/mol) | ΔG° (kcal/mol) | QCT (e) | ΔQC1 (e) | ΔRC2C3 (Å) | RC2C3TS (Å) | ΔRFeCl (Å) |
|---|---|---|---|---|---|---|---|
| 1 | 18.58 | –35.50 | 0.158 | –0.266 | 0.013 | 1.344 | 0.518 |
| 2 | 12.47 | –39.18 | 0.227 | –0.148 | 0.019 | 1.350 | 0.110 |
| 3 | 19.74 | –30.43 | 0.129 | –0.324 | 0.018 | 1.349 | 0.808 |
| 4 | 16.25 | –17.46 | 0.118 | –0.245 | 0.008 | 1.339 | 0.622 |
| 5 | 21.89 | –11.69 | 0.161 | –0.373 | 0.020 | 1.351 | 0.728 |
| 6 | 9.24 | –56.65 | 0.169 | –0.142 | 0.014 | 1.345 | 0.108 |
| 7 | 11.28 | –66.71 | 0.180 | –0.155 | 0.018 | 1.349 | 0.127 |
| 8 | 7.49 | –36.14 | 0.208 | –0.122 | 0.015 | 1.346 | 0.088 |
| 9 | 11.90 | –41.27 | 0.223 | –0.137 | 0.019 | 1.350 | 0.101 |
Results are for the most favorable trans products. Changes are those at transition state compared with reactants.
To examine experimentally the carbene substituent effect on the (bio)catalytic cyclopropanation reactions, side-by-side experiments were performed using EDA vs ethyl 2-diazo-2-phenyl-acetate (EDPA, 6) as the carbene donor in the presence of Mb(H64V,V68A), hemin or Fe(TPP) as the catalyst (Table 4). For these reactions, 4-methoxy-styrene (5) was used as the olefin substrate instead of the more volatile styrene because of the application of elevated temperatures (50 °C) for the reactions involving EDPA. As summarized by the data in Table 4, these experiments revealed that the Mb(H64V,V68A)-catalyzed cyclopropanation reaction with the acceptor-only carbene donor (EDA) proceeds with significantly higher rate (528-fold) and efficiency (140-fold higher TON) at room temperature than the corresponding reactions with EDPA at 50 °C (Entry 1 vs 2). A similar reactivity trend was observed for hemin and Fe(TPP), albeit both rates and catalytic turnovers (TON) were drastically reduced in both cases compared to the hemoprotein catalyst. Furthermore, unlike the latter, hemin yielded no cyclopropanation product in the reaction with EDPA at 50 °C. These results are therefore consistent with the higher reactivity of the [Fe(Por)(CHCO2Et)] vs [Fe(Por)(C(Ph)CO2Et)] intermediate as predicted by our computational analyses and previously observed using isolated IPC complexes.31 As noted above, available experimental data31 demonstrate the reduced reactivity of [Fe(Por)(CPh2)] vs [Fe(Por)(C(Ph)CO2Et)] in the cyclopropanation reaction.
Table 4. Reactivity Analysis of Bio- And Chemocatalytic Cyclopropanation Reactions Involving Different Diazo Reagentsa.
| Entry | Catalyst | Temp | Product | Rateb (TON/min) | TONc |
|---|---|---|---|---|---|
| 1 | Mb(H64V,V68A) | r.t. | 7 | 528 | 7,840 |
| 2 | Mb(H64V,V68A) | 50 °C | 8 | 1 | 55 |
| 3 | – | 50 °C | 8 | 1 | (0.2) |
| 4 | Fe(ppIX) | r.t. | 7 | 2 | 16 |
| 5 | Fe(ppIX) | 50 °C | 8 | n.a. | n.a. |
| 6 | Fe(TPP) | r.t. | 7 | 0.2 | 2 |
| 7 | Fe(TPP) | r.t. | 8 | 5 × 10–4 | 0.02 |
Reaction conditions: 10 mM 5, 10 mM EDA (2) or EPDA (6), catalyst (0.01 mol % Mb(H64V,V68A); 2 mol % hemin; 10 mol % Fe(TPP)), 10 mM sodium dithionite in 50 mM potassium phosphate buffer (pH 7) for Mb variant and hemin, or CH2Cl2 for Fe(TPP), at the indicated temperature.
Initial rate over 1 min (EDA) and over 30 min (EDPA)
After 16 h; n.a. = not active.
Axial Ligand Effect
Previous studies on hemoprotein-catalyzed cyclopropanation suggested an important role of the iron binding axial ligand toward affecting the reactivity of these biocatalysts. This effect can be evinced, for example, from the higher cyclopropanation activity exhibited by engineered myoglobins, which bear a histidine ligated heme,50,51 or by serine- and histidine-ligated P450s,47,48 compared to P450 featuring a native, cysteinate-ligated heme.46 Clear structure–reactivity trends cannot be extracted from these reports, however, due to the use of different protein scaffolds (i.e., Mb vs P450s; different engineered variants), reaction conditions, and/or their investigation in whole-cell biotransformations,47,48 whose performance is affected by multiple factors such as the intracellular environment and protein expression levels. To better examine the impact of the axial ligand on hemoprotein-catalyzed cyclopropanation reactivity, two variants of Mb(H64V,V68A) were prepared in which the proximal histidine residue (His93) is substituted for cysteine (as in P450s) or phenylalanine, which is unable to coordinate the heme iron. After expression and isolation from E. coli, the proximal ligand variants Mb(H64V,V68A,H93C) and Mb(H64V,V68A,H93F) were found to exhibit distinct spectroscopic features, compared to each other and to Mb(H64V,V68A), with respect to their Soret and Q bands in the ferric, ferrous and/or CO-bound form (Figure S1). These spectral differences reflect the different heme iron coordination environment present in these metalloproteins. Next, the catalytic rates of these biocatalysts for styrene cyclopropanation with EDA were determined via time course experiments. These experiments showed that the histidine-ligated Mb(H64V,V68A) catalyzes this reaction at a significantly higher rate (995 TON/min) than the cysteine-ligated counterpart (235 TON/min) or the Mb(H64V,V68A,H93F) variant, which lacks metal coordination at the axial position (210 TON/min). Based on these results, the following order of reactivity was derived for the proximal ligand Mb variants: Mb(H64V,V68A) ≫ Mb(H64V,V68A,H93C) > Mb(H64V,V68A,H93F).
To investigate how these differences in enzymatic activity may correlate with the reactivity of the IPC intermediate, we compared the calculated energy profile for styrene cyclopropanation in the presence of [Fe(Por)(CHCO2Et)] (reaction 2) with that involving [Fe(Por)(CHCO2Et)(5-MeIm)] (reaction 6), in which 5-methylimidazole (5-MeIm) mimics the axial His ligand (proximal His) present in myoglobin and Mb(H64V,V68A). These analyses show that the energy barrier (ΔG‡) for reaction 6 is lowered by 3.23 kcal/mol compared to the heme mimic system lacking the axial ligand (reaction 2). This effect may arise from a more electrophilic carbene (+0.01 e QC1, Table S10) and a weaker Fe–C bond (elongated by 0.05 Å, Table S9). Similarly to the imidazole ligand, a thiolate (HS–) ligand was also found to reduce the relative energy of the transition state (ΔG‡), as determined by analysis of the same reaction using [Fe(Por)(CHCO2Et)(SH–)] (reaction 7). However, the ΔΔG‡ value in this case is smaller (1.19 kcal/mol, Table 3) compared to the imidazole axial ligand in reaction 6. The more favorable reaction rate associated with the neutral axial ligand may be a result of smaller energy cost of smaller geometry change (see, e.g., ΔRFeCl and ΔRClC2 in Table 3) and smaller charge change (see, e.g., QCT and ΔQCl in Table 3) in the early transition states compared with the reactants. The relatively larger geometry change and charge change due to a negatively charged ligand probably comes from its relatively stronger trans effect and charge donation effect.86 Compared to the charged thiolate ligand (RS–) or no axial ligand, the imidazole ligand appears to exert a more favorable effect toward reducing the energy barrier not only for the cyclopropanation step, but also for the carbene formation step as reported recently.69 Such a synergistic effect may therefore lie at the basis of the excellent role of the histidine proximal ligand in modulating biocatalytic cyclopropanation reactivity, as evidenced by our results with the set of closely related, proximal ligand Mb variants. The beneficial effect of this histidine-ligated heme iron configuration is also apparent from the significantly higher catalytic activity and rate of Mb(H64V,V68A) compared to free hemin in the reactions described in Table 4, including those with the less reactive acceptor/donor diazo reagent (EDPA).
Effect of Porphyrin Substitution
Based on the results above, we envision that modification of the porphyrin ligand could provide an important, future opportunity for tuning the carbene transfer reactivity of hemoprotein-based catalysts, as suggested by the calculations on reactions 4 and 5 using authentic porphyrin substituents compared with nonsubstituted porphyrins in reactions 1 and 2. Supporting this notion, we recently reported how replacement of heme with an iron-chlorin cofactor in myoglobin can confer enhanced cyclopropanation reactivity under aerobic conditions.87 The effect of porphyrin substituents on the enzymatic activity of hemoproteins is apparent also in the context of other reactions.88,89 Thus, to help guide future catalyst and reaction development, we set to examine the styrene cyclopropanation pathway using an electrondeficient iron-porphyrin carrying four electronwithdrawing cyano (−CN) groups at the four meso positions (reaction 8), which based on the newly revealed cyclopropanation mechanism discussed above were expected to enhance carbene’s electrophilicity. As anticipated, the carbene carbon was found to bear a more positive charge by 0.029 e than the corresponding carbene atom in the unsubstituted porphyrin system of reaction 2 (Table S10). This change results in improved reactivity, as suggested by the reduced ΔG‡ of 7.49 kcal/mol compared to 12.47 kcal/mol in reaction 2. This ligand modification is thus expected to dramatically increase the rate of the cyclopropanation step. Figure 3-8 vs 3-2 indicates slightly smaller geometric changes in reactions 8 vs 2. As this reaction has early transition state feature, smaller structural changes are associated with lower energy barriers, supporting the reduced ΔG‡ of reaction 8 vs 2.
Whereas these computational analyses provide insights into the steric (reactions 4 and 5) and electronic (reaction 8) effects of porphyrin substituents on cyclopropanation, previous work by Zhang and co-workers showed how the introduction of an hydrogen-bonding group (HBG) at the meso position (Figure 2-9) improves the performance of a Co-porphyrin catalyst in cyclopropanation reactions.66 This noncovalent interaction was found to decrease the carbene formation barrier in both Co-66 and Fe-porphyrins69 due to carbene stabilization via the hydrogen bond between carbene’s carboxylate moiety and the amide group of the HBG. Because the effect of HBG on the cyclopropanation pathway remains undefined, we studied the styrene cyclopropanation reaction involving the CHCO2Et complex of the HBG-substituted porphyrin, reaction 9. As shown in Table 3, the HBG group decreases the ΔG‡ for the cyclopropanation by 0.57 kcal/mol, which together with the ΔG‡ reduction of 2.25 kcal/mol for the carbene formation step69 may contribute to promoting catalytic performance as found experimentally for Co porphyrins.66 As the side chain of many natural amino acid residues (e.g., Ser, Thr, Asn, Tyr, etc.) can establish H-bond interactions, these findings are relevant toward the future design and engineering of biocatalysts with improved cyclopropanation reactivity.
Upon investigation of the effect of various structural features (carbene substituent, proximal ligand, porphyrin substituents) on IPC mediated cyclopropanation pathways, we noted the existence of a good correlation between the Gibbs free energy of activation and the carbene carbon charge change (R2 = 0.93, Figure 4). This result further highlights the importance of the carbene electrophilicity in cyclopropanation catalyzed by heme-based carbene. As seen from Figure 4, smaller charge changes are associated with lower energy barriers, further supporting an early transition state character for the reactive intermediates in these reactions.
Figure 4.

Plot of ΔQC1 vs ΔG‡.
Overall Reactions and Comparison with Metal-Free Reactions
At high temperatures, diazo reagents can undergo thermal decomposition leading to cyclopropanation,90 C–H insertion,91 and N–H insertion,92 in the absence of a metal catalyst. To compare and contrast the energy profiles of iron porphyrin-catalyzed vs metal-free cyclopropanation, we performed a systematic examination of four metal-involved pathways and two metal-free pathways using [CHCO2Et] as the carbene moiety (Scheme 2). Pathway I entails iron-porphyrin catalyzed decomposition of EDA to form the IPC [Fe(Por)(CHCO2Et)], followed by the cyclopropanation step according to the most favorable mechanism as described earlier. Comparison of the computed ΔG‡ for the cyclopropanation and carbene formation step as determined here and previously,69 respectively, suggests that the latter is the rate-determining step (RDS) in this reaction pathway. Compared to pathway I, pathway II involves thermal decomposition of the IPC intermediate, followed by styrene cyclopropanation by the free carbene. As illustrated in Scheme 2, the carbene dissociation step becomes rate determining in this pathway, with a 15 kcal/mol higher energy barrier compared to the RDS in pathway I. In this case, although the triplet state of the free carbene is more favorable than the singlet state (Table S13), in agreement with previous calculations,91 the singlet carbene was considered for the pathway energy calculations because it is the most relevant species to react with singlet styrene to form the singlet cyclopropanation product, as done previously.91 In the case of metal-free reactions with diazo compound, two pathways were considered, namely pathway V, which involves initial thermal decomposition of the diazo compound to liberate the free carbene followed by its reaction with styrene, and pathway VI, which involves a direct concerted cyclopropanation with concomitant release of N2. As shown in Scheme 2, the former pathway (V) is relatively more favorable than pathway VI by 10.28 kcal/mol, with carbene formation by thermal decomposition representing the RDS. Based on these analyses, pathways I and V are the preferred ones in the presence and in the absence of the metal catalyst, respectively, with the metal-assisted pathway I being more favorable by 20.91 kcal/mol. Because preformed IPCs have been also investigated experimentally,31 pathways III and IV, which start from preformed IPCs and involve metal-assisted cyclopropanation and carbene dissociation/free carbene cyclopropanation, respectively, were also compared. As observed for pathway I vs II, the metal-assisted cyclopropanation pathway III is largely preferred over pathway IV by 28.43 kcal/mol (Scheme 2). As the temperature is raised from room temperature to 80 °C, a condition applied to some reactions with preformed IPC31 and metal-free reactions with diazo compounds,91 the viable metal-assisted pathways (I and III) feature increased energy barriers by 2–3 kcal/mol, whereas the non-metal-assisted (thermal decomposition) pathways (V and IV) have reduced barriers by ∼2 kcal/mol. These changes notwithstanding, the metal-assisted pathways remain more favorable. In the presence of the donor–acceptor carbene, C(Ph)CO2Et, the energy barrier difference for the RDS in metal-free pathway V vs the metal-assisted pathway I is reduced by 4.30 kcal/mol at room temperature and further lowered by 3.04 kcal/mol at elevated temperature used for experimental studies of preformed IPC involved cyclopropanations. The contribution from the metal-free pathway is even further enhanced in the case of the donor–donor carbene, C(Ph)2 (Table 5). This trend is consistent with the improved performance of more electron-rich donor–acceptor diazo compounds in metal-free reactions at high temperatures.90 Overall, these studies show that all reactions starting from either the diazo reagent or IPC feature the FeII-assisted process as the most favorable pathway, with the catalytic roles in helping both carbene formation and cyclopropanation. At the same time, the contribution from the metal-free pathway can increase as the temperature is raised and particularly so for carbenes bearing electron-donating substituents.
Scheme 2. Cyclopropanation Pathways with and without Metal.
The reported data are calculated at room temperature in protein environment.
Table 5. Energies for Rate Determining Steps in Pathways I–IV.
| C(X)Y | T | From | Pathway | ΔGc |
|---|---|---|---|---|
| X = H, Y = CO2Eta | r.t. | Diazo | I | 13.59 |
| V | 34.50 | |||
| IPC | III | 10.46 | ||
| IV | 38.89 | |||
| 80 °C | Diazo | I | 15.78 | |
| V | 33.90 | |||
| IPC | III | 13.41 | ||
| IV | 36.22 | |||
| X = Ph, Y = CO2Etb | r.t. | Diazo | I | 15.74 |
| V | 31.45 | |||
| IPC | III | 16.87 | ||
| IV | 32.02 | |||
| 60 °C | Diazo | I | 17.73 | |
| V | 31.30 | |||
| IPC | III | 18.58 | ||
| IV | 30.15 | |||
| X = Ph, Y = Phb | r.t. | Diazo | I | 18.28 |
| V | 30.67 | |||
| IPC | III | 18.20 | ||
| IV | 33.57 | |||
| 60 °C | Diazo | I | 20.20 | |
| V | 30.51 | |||
| IPC | III | 19.74 | ||
| IV | 31.80 |
Protein environment.
Benzene.
Unit: kcal/mol.
Conclusions
This work shows for the first time that the increasingly useful C=C functionalization mediated by heme carbenes features a FeII-based, nonradical, concerted nonsynchronous mechanism, as supported by our DFT calculations and experimental mechanistic studies. This mechanism is thus distinct from the typical FeIV-based, radical, stepwise mechanism of heme-dependent enzymes (i.e., cytochrome P450s). The present studies also provide key and novel insights into effects of the carbene substituent, porphyrin substituent, and the axial ligand on the activation barriers of IPC-mediated cyclopropanation and on the reactivity of hemoprotein-based cyclopropanation biocatalysts. In particular, our results demonstrate the importance of an electron-deficient carbene (acceptor-only > acceptor/donor > donor/donor) as well as that of an imidazole axial ligand bound to the heme iron toward favoring cyclopropanation reactivity. Furthermore, our analyses predict the potentially beneficial effect of exploiting protein-mediated H-bond interactions and/or electron-deficient porphyrin ligands toward further enhancing such reactivity, thereby providing valuable guidelines for future catalyst development efforts in the expanding area of hemoprotein-mediated carbene transfer chemistry. Incidentally, these studies demonstrate the feasibility of performing biocatalytic cyclopropanation reactions in the presence of poorly reactive donor–acceptor diazo reagents such as EDPA. This finding is relevant because biocatalytic carbene transfer reactions have so far been limited to acceptor-only diazo reagents and paves the way to future studies to explore the scope of this transformation. Finally, we report a first comparative analysis of metal-catalyzed vs thermally induced cyclopropanation, which further highlights the importance of heme-based catalysts and the critical role of forming electrophilic heme carbenes in these reactions. Overall, these studies are expected to facilitate the development of sustainable iron-porphyrin based (bio)catalysts for cyclopropanations and, possibly, other important carbene-mediated transformations.
EXPERIMENTAL PROCEDURES
Computational Analyses
Nine styrene cyclopropanation reactions (see Scheme 1) and additional comparative reactions (see Scheme 2) were computationally investigated. All calculations were performed using Gaussian 09.93 All models investigated in this work were subject to full geometry optimizations without any symmetry constraints in the experimentally used solvents31 with the PCM method,94 i.e., benzene for reactions 1–5 and 8–9 and for reactions 6–7, a dielectric constant of 4.0 was used to simulate the protein environment effect as done previously.95 The frequency analysis was used to verify the nature of the stationary points on respective potential energy surfaces and to provide zero-point energy corrected electronic energies (EZPE’s), enthalpies (H’s), and Gibbs free energies (G’s) at 1 atm and experimental reaction temperatures, i.e., 333.15 K for reactions 1–5 and 8–9, and room temperature (r.t.) for reactions 6–7. The atomic charges and spin densities reported here are from the Natural Population Analysis (NPA) and Mulliken schemes respectively, as implemented in Gaussian 09. Relative Gibbs free energies and selected geometry, charge, and spin density results were discussed here, while all absolute values of electronic energies (E’s), zero-point energy corrected electronic energies (EZPE’s), enthalpies (H’s), Gibbs free energies (G’s), key geometric parameters, charges, spin densities, 3D structures and coordinates of optimized structures of the most favorable conformations and spin states as well as other details are in the Supporting Information.
All calculations were done using a range-separated hybrid DFT method with dispersion correction, ωB97XD,96 based on its excellent performance on heme carbenes and other catalytic systems from previous methodological studies.68−70,97 This ωB97XD method was found to yield accurate predictions of various experimental spectroscopic properties, structural features, and reactivity results of iron porphyrin carbenes.68−70 The basis set includes the effective core potential (ECP) basis LanL2DZ98 for iron and the triple-ζ basis 6-311G(d) for all other elements, which was found to provide accurate predictions of various experimental reaction properties of heme carbenes.69,70 The use of a much larger 6-311++G(2d,2p) basis for all nonmetal atoms was found to yield similar results and thus further support the efficient use of the current basis set in reaction studies.70 The alternative use of an all-electron basis for the metal center was found here to result in qualitatively same conclusions of the geometric, electronic, and energetic features, and therefore supports the use of LanL2DZ basis set here, which may help direct comparisons with late transition metals in future studies, for which ECP basis is more readily available and commonly used. The details of these methodological studies are in the Supporting Information.
Among the nine reactions studied here, for reactions 2 and 6–9, singlet spin states are favored for both reactants and transition states, while in reactions 1 and 3–5, because singlet is favored for reactants and triplet is favorable for transition states, they exhibit the so-called two state reactivity99−102 and there are minimum energy crossing points (MECPs) between these two spin states in these reactions. However, previous work99−102 also shows that these MECPs are of lower energy than the reaction transition states, i.e., they are not rate-limiting. So, the singlet reactants here after passing MECPs to become triplet reactants still need more energy to overcome the barriers of triplet transition states (the most favorable pathways here) to form products. Accordingly, the focus of this first computational mechanistic work in this area is on the rate-limiting reaction transition states, which is the most important part to understand the reactions and help future experimental work and catalyst design. Indeed, such transition states studied here well reproduced experimental reactivity results as described above.
The KIE calculations with tunneling effect correction (KIEW) were done using the following formulas reported recently:103
| 1 |
| 2 |
| 3 |
where h is Planck’s constant, υ is the imaginary frequency of the transition state, k is Boltzmann’s constant, T is temperature, and subscripts of H and D indicate hydrogen and deuterium, respectively.
General Procedures and Analytical Methods
All chemicals and reagents were purchased from commercial suppliers (Sigma-Aldrich, AlfaAeser, Cambridge Isotope Laboratories, Inc.) and used without any further purification, unless otherwise stated. 2-Diazo-2-phenyl-acetate (6) was prepared following reported procedures.104 Authentic standards for 4 and 7 were prepared as described previously.511H, 13C, and 2H NMR spectra were measured on a Bruker DPX-400 instrument (operating at 400 MHz for 1H, 100 MHz for 13C, and 60 MHz for 2H) or a Bruker DPX-500 instrument (operating at 500 MHz for 1H and 125 MHz for 13C). Tetramethylsilane (TMS) served as the internal standard (0 ppm) for 1H NMR, CDCl3 was used as the internal standard (77.0 ppm) for 13C NMR and for 2H NMR (7.26 ppm). Gas chromatography (GC) analyses were carried out using a Shimadzu GC-2010 gas chromatograph equipped with an FID detector and a Chiral Cyclosil-B column (30 m × 0.25 mm × 0.25 mm film). Separation method for cyclopropanation reactions: 1 mL injection, injector temp.: 200 °C, detector temp.: 300 °C. Gradient: column temperature set at 120 °C for 3 min, then to 150 °C at 0.8 °C min–1, then to 245 °C at 25 °C min–1. Total run time: 46.30 min. HPLC analyses were performed on a Shimadzu LC-2010A-HT equipped with a VisionHT C18 column and a UV–vis detector. Injection volume: 20 μL. Flow rate: 1 mL/min. Gradient: 30% acetonitrile (0.1% TFA) in water (0.1% TFA) for 3 min, then increased to 90% over 58 min.
Synthesis of cis-β-Deutero-styrene (1b)
The cis-β-deutero-styrene was prepared in two steps from phenylacetylene according to the synthetic scheme shown in Figure S2. To a flame-dried 125 mL round-bottom flask was added phenylacetylene (3.3 mL, 30.0 mmol, 1.0 equiv) and anhydrous THF (20.0 mL). The mixture was stirred in an ice–water bath (0 °C) under argon pressure, and n-butyllithium (2.5 M in hexanes, 15.6 mL, 39.0 mmol, 1.3 equiv) was added dropwise via a gastight syringe over 15 min. The reaction mixture was stirred at 0 °C for 1 h, then D2O (3.0 mL) was added slowly. The resulting mixture was stirred overnight at room temperature under argon pressure. The crude reaction mixture was passed through a pad of anhydrous MgSO4, using a medium-porosity fritted-glass funnel and rinsing with pentane (10 mL, three times). The solvent was evaporated under reduced pressure to afford phenylacetylene-d1 (2.93 g, 95% yield). 1H NMR (500 MHz, CDCl3): δ 7.49–7.47 ppm (m, 2H), 7.34–7.28 ppm (m, 3H). 13C NMR (125 MHz, CDCl3): 132.1 ppm, 128.8 ppm, 128.3 ppm, 122.2 ppm, 83.3 ppm (t, J = 7.5 Hz), 77.3 ppm (t, J = 38.3 Hz). GC-MS m/z (% relative intensity): 104 (57.4), 103 (100), 78 (18.8), 77 (17.4). To a flame-dried 50 mL round-bottom flask was added zirconocene hydrochloride (Schwartz’ reagent) (2.052 g, 7.93 mmol, 1.1 equiv), and the flask was purged with argon for 1 min. Anhydrous dichloromethane (15 mL) was added, and the flask was placed in an ice–water bath (0 °C). Phenylacetylene-d1 (0.744 g, 0.80 mL, 7.2 mmol, 1.0 equiv) was added via syringe, and the reaction mixture was stirred at room temperature in the dark for 2 h. Water (1.0 mL) was added, and the reaction mixture was stirred for an additional 2 h. The resulting mixture was passed through a pad of anhydrous MgSO4, using a medium-porosity fritted-glass funnel and rinsing with pentane (5 mL, three times). The resulting suspension was passed through a silica gel pad using a medium-porosity fritted-glass funnel and eluting with pentanes. The filtrate was concentrated under reduced pressure and an ice–water bath to afford cis-β-deutero-styrene (1b) (0.404 g, 53% yield; >98:2 d.r. (1H NMR)) as a light-yellow oil. Note: to avoid substantial loss of the volatile product, a trace amount of solvent was not removed (ca. 5% pentanes). 1H NMR (500 MHz, CDCl3): δ 7.43 ppm (d, J = 7.5 Hz, 2H), 7.35 ppm (t, J = 7.4 Hz, 2H), 7.27 ppm (m, 1H), 6.73 ppm (dt, J = 10.8 Hz, 2.1 Hz, 1H), 5.25 ppm (d, J = 10.9 Hz, 1H). 13C NMR (125 MHz, CDCl3): δ 137.6 ppm, 136.8 ppm, 128.5 ppm, 127.8 ppm, 126.2 ppm, 113.7 ppm (t, J = 23.6 Hz). GC-MS m/z (% relative intensity): 105 (100.0), 104 (40.5), 79 (21.7), 78 (20.1).
Synthesis of ethyl 2-(4-methoxyphenyl)-1-phenylcyclopropanecarboxylate (8)
An authentic standard for compound 8 was prepared via Rh-catalyzed cyclopropanation as follows. To a flame-dried 10 mL round-bottom flask, equipped with a stir bar, were added 4-methoxy-styrene (100 mg, 0.75 mmol, 2.3 eqiv.), Rh2(OAc)4 (3 mg, 6.4 μmol, 2 mol %), and anhydrous DCM (3 mL) under argon. After that, a solution of ethyl 2-diazo-2-phenylacetate (62 mg, 0.32 mmol, 1.0 eqiv.) in anhydrous DCM (1 mL) was slowly added dropwise over a period of 30 min. The resulting reaction mixture was stirred at room temperature for 16 h. The solvent was removed under reduced pressure and the crude product purified via column chromatography on silica gel using 0–5% diethyl ether in pentanes to yield ethyl 2-(4-methoxyphenyl)-1-phenylcyclopropanecarboxylate as a white crystalline solid (79 mg, 0.27 mmol, 85% yield). Rf = 0.24 (5% diethyl ether in pentanes). 1H NMR (CDCl3, 500 MHz): δ 7.12 (s, 3H, Har), 7.03 (s, 2H, Har), 6.69 (d, 2H, Har), 6.60 (d, 2H, Har), 4.18–4.08 (m, 2H, −CH2CH3), 3.69 (s, 3H, −OCH3), 3.05 (m, 1H, HBn), 2.15 (m, 1H, CCCH2), 1.79 (m, 1H, CCCH2), 1.18 (t, 3H, −CH2CH3). 13C NMR (CDCl3, 125 MHz): δ 174.0, 158.2, 135.1, 132.1, 129.1, 128.6, 127.7, 126.9, 113.3, 61.3, 55.2, 37.4, 32.6, 20.4, 14.3. GC-MS m/z (% relative intensity): 297 (21.9), 296 (100.0), 267 (14.8), 251 (26.0), 250 (81.7), 249 (82.2), 224 (22.2), 223 (94.8), 222 (20.2), 221 (70.1).
Protein Expression
The Mb variants were expressed in E. coli BL21(DE3) or E. coli C41(DE3) cells as follows. After transformation, cells were grown in TB medium (ampicillin, 100 mg L–1) at 37 °C (200 rpm) until OD600 reached 0.6. Cells were then induced with 0.50 mM isopropyl-β-d-1-thiogalactopyranoside (IPTG) and 0.3 mM δ-aminolevulinic acid (ALA). The cells were pelleted by centrifugation (4,000 rpm, 4 °C, 20 min) and then resuspended in 20 mL of Ni-NTA Lysis Buffer (50 mM KPi, 250 mM NaCl, 10 mM histidine, pH 8.0). Resuspended cells were frozen and stored at −80 °C until purification. Cell suspensions were thawed at room temperature, lysed by sonication, and clarified by centrifugation (14,000 rpm, 20 min, 4 °C). The clarified lysate was transferred to a Ni-NTA column equilibrated with Ni-NTA Lysis Buffer. The resin was washed with 50 mL of Ni-NTA Lysis Buffer and then 50 mL of Ni-NTA Wash Buffer (50 mM KPi, 250 mM NaCl, 20 mM histidine, pH 8.0). Proteins were eluted with Ni-NTA Elution Buffer (50 mM KPi, 250 mM NaCl, 250 mM histidine, pH 7.0). After elution from the Ni-NTA column, the protein was buffer exchanged against 50 mM KPi buffer (pH 7.0) using 10 kDa Centricon filters. Myoglobin concentration was determined using an extinction coefficient of ε408 = 157 mM–1 cm–1 for ferric Mb(H64V,V68A), ε406 = 145 mM–1 cm–1 for ferric Mb(H64V,V68A,H93F), and ε399 = 118 mM–1 cm–1 for ferric Mb(H64V,V68A,H93C), as determined using the hemochrome assay.105
Reactions with cis-β-Deutero-styrene
The Mb- and hemin-catalyzed reactions were carried out at 2 mL-scale using 60 μM catalyst, 0.2 M cis-β-d1-styrene (1b), 0.4 M ethyl diazoacetate (EDA), and 10 mM sodium dithionite. In a typical reaction, a solution containing sodium dithionite (100 mM stock solution) in potassium phosphate buffer (50 mM, pH 7, 10% dimethylformamide (DMF)) was purged with argon for 3 min in a septum-capped vial. In a separate vial, a buffered solution containing myoglobin (Mb) or hemin (80 mM in DMF) was carefully purged in tandem, and the two solutions were then mixed via cannula. Reactions were initiated by the addition of cis-β-d1-styrene (42.1 mg, 0.400 mmol, 1.0 equiv), followed by addition of EDA (84.0 μL, 0.800 mmol, 2.0 equiv) with a syringe. The reaction was stirred at room temperature under argon pressure for 16 h. The reaction product was extracted with dichloromethane (2 mL, three times), and the organic layers were collected and dried over anhydrous sodium sulfate. The organic solvent was removed by rotary evaporation, and the crude trans-2-phenyl-1-ethyl carboxylate cyclopropane product (2a/b) was purified via flash column chromatography using silica gel and 5% EtOAc/hexanes as the eluent to afford the desired product as a clear, colorless oil. For the Fe(TPP)- and Co(TPP)-catalyzed reactions, cis-β-d1-styrene (50.0 mg, 0.475 mmol, 1.0 equiv) and either Fe(TPP)Cl (16.7 mg, 0.024 mmol, 0.05 equiv) or Co(TPP) (16.1 mg, 0.024 mmol, 0.05 equiv) was added to a flame-dried 50 mL two-neck round-bottom flask. The flask was purged with argon for 1 min, and anhydrous dichloromethane (15 mL) was added. Ethyl-2-diazoacetate (75.0 μL, 0.713 mmol, 1.5 equiv) was dissolved in anhydrous dichloromethane (3 mL), and was added slowly to the reaction mixture over 4 h. The reaction flask was heated to a reflux (40 °C) under an argon atmosphere. After 16 h, the crude reaction mixture was concentrated under reduced pressure, and the crude trans-2-phenyl-1-ethyl carboxylate cyclopropane product (2a/b) was purified as described above. Isolated yields were 2.4 mg (3.1%) for WT Mb, 37.0 mg (48.3%) for Mb(H64V,V68A), 19.1 mg (24.9%) for hemin, 12.8 mg (14.1%) for Fe(TPP), and 4.5 mg (5.0%) for Co(TPP). Characterization data for enantiopure 2a (from Mb(H64V,V6A) reaction). 1H NMR (400 MHz, CDCl3): δ 7.30 (t, J = 7.2 Hz, 2H), 7.22 (t, J = 7.2 Hz, 1H), 7.11 (d, J = 7.2 Hz, 2H), 4.20 (q, J = 14.4 Hz, 7.2 Hz, 2H), 2.53 (dd, J = 9.2 Hz, 4.0 Hz, 1H), 1.91 (t (=dd), J = 4.0 Hz, 1H), 1.61 (dd, J = 8.9 Hz, 5.2 Hz, 1H), 1.30 (t, J = 7.2 Hz, 3H) ppm. 13C NMR (100 MHz, CDCl3): δ 173.2, 140.0, 128.3, 126.3, 126.0, 60.5, 25.9, 23.9, 16.8 (t, J = 25 Hz), 14.1 ppm. 2H NMR (60 MHz, CDCl3): δ 1.32 ppm (s, 1H). GC-MS m/z (% relative intensity): 191 (35.3), 146 (31.7), 145 (26.7), 135 (24.7), 118 (100.0), 117 (31.2), 116 (62.0), 92 (20.5). The 1H NMR and 2H NMR spectrum of the isolated Co(TPP)-catalyzed reaction product shows a 1.5:1 mixture of 3a and 3b diastereomers (2H NMR (60 MHz, CDCl3): δ 1.72 ppm (s, 0.66H), 1.32 ppm (s, 1H)). In contrast, the 1H NMR and 2H NMR spectra of the isolated products from the reactions with Mb and Fe(TPP) shows a single diastereomer (3a) (see spectra in Supporting Information).
Radical Spin Trap Experiments
The Mb- and hemin-catalyzed reactions were carried out on a 400 μL scale using 20 μM catalyst, 10 mM styrene, 20 mM ethyl diazoacetate (EDA), with or without 100 mM 5,5-dimethyl-1-pyrroline-N-oxide (DMPO), and 10 mM sodium dithionite. In a typical reaction, a solution containing sodium dithionite (100 mM stock solution) in potassium phosphate buffer (50 mM, pH 7, 10% dimethylformamide (DMF)) was purged with argon for 3 min in a septum-capped vial. In a separate vial, a buffered solution containing myoglobin (Mb) or hemin (80 mM in DMF) was carefully purged in tandem, and the two solutions were then mixed together via cannula. Reactions were initiated by the addition of styrene (40 μL, 100 mM stock in DMF, 1.0 equiv), followed by the addition of DMPO (40 μL, 1 M stock in DMF, 10.0 equiv), and EDA (40 μL, 200 mM stock in DMF, 2.0 equiv) with a syringe. The reaction was stirred at room temperature, under argon pressure for 16 h. For product analysis, internal standard (20 μL of benzodioxole at 100 mM in ethanol) was added to the reaction mixture, followed by extraction with dichloromethane (400 μL), and analysis by GC-FID. For the Co(TPP)-catalyzed reaction, Co(TPP) (8.1 mg, 0.012 mmol, 0.05 equiv), styrene (25.0 mg, 0.240 mmol, 1.0 equiv), and DMPO (0.272g, 2.40 mmol, 10.0 equiv) were added to a flame-dried 25 mL two-neck round-bottom flask. The flask was purged with argon for 1 min, and anhydrous dichloromethane (3 mL) was added. Ethyl-2-diazoacetate (38.0 μL, 0.360 mmol, 1.5 equiv) was dissolved in anhydrous dichloromethane (2 mL), and was added slowly to the reaction mixture over 4 h. The flask was heated to a reflux (40 °C) under argon atmosphere. After 16 h, internal standard (20 μL of benzodioxole at 100 mM in ethanol) was added to a 400 μL aliquot of the reaction mixture. The mixture was washed with 400 μL of saturated NaCl solution, followed by centrifugation (14,000 rpm) and analysis of the organic layer by GC-FID.
Reactivity studies with EDA vs EDPA
The hemin- and Mb-catalyzed reactions were carried out at a 400 μL-scale using 200 μM hemin or 1 μM Mb(H64V,V68A), 10 mM 4-methoxy-styrene, 10 mM diazo compound (ethyl 2-diazoacetate (EDA) or ethyl 2-diazo-2-phenylacetate (EDPA)), and 10 mM sodium dithionite in potassium phosphate buffer (50 mM, pH 7.0). In a typical procedure, a buffered solution containing sodium dithionite was degassed by bubbling argon into the mixture for 3 min in a sealed vial. A solution containing the catalyst (hemin in DMSO; Mb(H64V,V68A) in buffer) was carefully degassed in a separate vial. The two solutions were then mixed together via cannula. Reactions were initiated by addition of 10 μL of styrene (from a 0.4 M stock solution in ethanol), followed by the addition of 10 μL of diazo compound (from a 0.4 M stock solution in ethanol) with a syringe. The reaction mixture was stirred at room temperature (ethyl 2-diazoacetate) or 50 °C (ethyl 2-diazo-2-phenylacetate) before quenching with 100 μL of 2 N HCl. Product formation (7 or 8) was monitored at different time points over 180 min and then after 16 h. The EDA reactions were analyzed by adding 20 μL of internal standard (benzodioxole, 50 mM in ethanol) to the reaction mixture, followed by extraction with 400 μL of DCM, and analysis by GC-FID. The EDPA reactions were extracted with 400 μL of DCM, the organic layer was removed via evaporation and the residue was dissolved in 300 μL methanol and 20 μL DMSO, followed by HPLC analysis. Control experiments with no catalyst showed negligible background (thermally induced) formation of 8 at 50 °C, this amount accounting for <0.5% of the product formed in the presence of Mb(H64V,V68A). The Fe(TPP)-catalyzed reactions were carried out on a 400 μL-scale using 1 mM Fe(TPP), 10 mM sodium dithionite, 10 mM styrene, and 10 mM diazo compound (ethyl 2-diazoacetate or ethyl 2-diazo-2-phenylacetate) in anhydrous DCM. In a typical procedure, 40 μL Fe(TPP) (from a 2.5 mM stock solution in anhydrous DCM) were added to a flame-dried, sealed vial under argon and purged with argon for 3 min. Subsequently, 380 μL of anhydrous DCM were added, and reactions were initiated by addition of 10 μL of styrene (from a 0.4 M stock solution in ethanol), followed by the addition of 10 μL of diazo compound (from a 0.4 M stock solution in ethanol) with a syringe. The reaction mixture was stirred at room temperature and product formation was monitored at different time points over 180 min and then after 16 h. The EDA reactions were immediately analyzed by GC-FID after adding 20 μL of internal standard (benzodioxole, 50 mM in ethanol). The EDPA reactions were stopped by rapidly removing the organic layer under high vacuum (<1–2 min), after which the residue was dissolved in 300 μL of methanol and 20 μL of DMSO and analyzed by HPLC. Rates and catalytic turnovers were determined by means calibration curves prepared using authentic standards of 7 and 8 prepared synthetically.
Reactions with Proximal Ligand Mb Variants
Reactions were carried out on a 400 μL scale using 1 μM Mb(H64V,V68A), or 5 μM for (Mb(H64V,V68A,H93C) and (Mb(H64V,V68A,H93F), 20 mM styrene, 0.5–80 mM ethyl diazoacetate (EDA), and 10 mM sodium dithionite. In a typical reaction, a solution containing sodium dithionite (100 mM stock solution) in potassium phosphate buffer (50 mM, pH 7, 20% MeOH) was purged with argon for 3 min in a septum-capped vial. In a separate vial, a buffered solution containing the Mb variant was carefully purged in tandem, and the two solutions were then mixed together via cannula. Reactions were initiated by the addition of styrene (10 μL, 800 mM stock solution in EtOH), followed by the addition EDA (80–800 mM stock solutions in EtOH) with a syringe. The reactions were stirred at room temperature under argon pressure for 30 s, and then immediately quenched with 100 μL HCl (2 N) via syringe. The reactions were analyzed by GC-FID as described above. The reported rates refer to the initial rates of product formation measured at near-saturation conditions (80 mM EDA).
Acknowledgments
This work was supported by the U.S. National Science Foundation (NSF) grant CHE-1300912 awarded to Y.Z. and by the U.S. National Institute of Health (NIH) grant GM098628 awarded to R.F. A.T. acknowledges support from the Ford Foundation Graduate Fellowship Program. MS instrumentation at the University of Rochester was supported by the NSF grant CHE-0946653.
Supporting Information Available
The Supporting Information is available free of charge on the ACS Publications website at DOI: 10.1021/jacs.7b09171.
Computational details of methods, absolute energies, key geometric parameters, charges, spin densities, 3D structures and coordinates of optimized structures of the most favorable conformations and spin states, as well as experimental UV–vis spectra, and NMR spectra (PDF)
The authors declare no competing financial interest.
Supplementary Material
References
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