Table 2. Table showing the ten most prevalent Pfam families among proteins with Spurio scores >= 0.8.
Pfam accessions for the families that are likely to be transposon associated are underlined.
| Pfam accession / Pfam identifier | Number of matches | Pfam description |
|---|---|---|
| PF13610 / DDE_Tnp_IS240 | 14 | Transposase DDE domain |
| PF00313 / CSD | 10 | Cold-shock domain |
| PF01609 / DDE_Tnp_1 | 9 | Transposase DDE domain |
| PF03400 / DDE_Tnp_IS1 | 8 | IS1 Transposase |
| PF14104 / DUF4277 | 8 | Domain of unknown function (DUF4277) |
| PF13340 / DUF4096 | 8 | Putative transposase |
| PF13586 / DDE_Tnp_1_2 | 7 | Transposase DDE domain |
| PF00936 / BMC | 6 | Bacterial Microcompartment domain |
| PF00239 / Resolvase | 6 | Resolvase, N-terminal domain |
| PF13358 / DDE_3 | 5 | DDE superfamily endonuclease |