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. 2018 Mar 20;31(2):165–167. doi: 10.1080/08998280.2018.1444298

Time trends for bacterial species and resistance patterns in semen in patients undergoing evaluation for male infertility

G Luke Machen a,, Erin T Bird a, Monica L Brown b, Dale A Ingalsbe b, Milaida M East b, Michelle Reyes c, Thomas J Kuehl b,c
PMCID: PMC5914399  PMID: 29706808

ABSTRACT

Semen from asymptomatic men who are being evaluated as male partners in interfile couples have been reported to contain a variety of bacteria. Longitudinal studies of the variation of these bacteria over time and their resistance patterns have not been commonly reported. At our institution, residues from semen samples are routinely evaluated for bacteria, including antibiotic sensitivity profiles. We set out to profile the changes in semen bacteria and antibiotic resistance at our institution over time. A total of 72 semen isolates were examined for type of bacteria and sensitivity to a panel of antibiotics. The results were divided into two separate 5-year intervals (the first beginning in 2006, the second in 2011) and compared. The majority of bacteria were skin flora, with Streptococcus and Staphylococcus being the most prevalent. The resistance data for these two pathogens showed minimal statistically significant difference between the two time periods, although the Staphylococcus species did show a trend toward increasing resistance, suggesting that antibiotics currently used in sperm cell preparations may need to be varied.

KEYWORDS: Bacterial resistance, infertility, male, semen, semen analysis


Semen from asymptomatic men being evaluated for infertility has been reported to contain a variety of bacteria. Frequently, these results are from contamination, the most likely sources of which are the male urethra or skin secondary to improper collection or colonization.1,2 Further, incidentally identified semen bacteria in the absence of symptoms are typically considered to have limited, if any, clinical significance.1,3 These species vary by population, but the most common bacteria are typically gram-positive organisms, such as Staphylococcus or Streptococcus species.4 Reports of semen samples positive for bacteria are extremely variable, with rates of 45% to 100%.5 Longitudinal studies of the variation of these bacteria over time as well as their resistance patterns have not been commonly reported. At our institution, to ensure appropriate processing of semen, residues from semen samples are routinely evaluated for bacteria with antibiotic sensitivity profiles. We set out to profile the changes in semen bacteria and antibiotic resistance at our institution over time.

METHODS

After institutional review board approval was obtained, a retrospective review was undertaken over a 10-year period from 2006 to 2016. Approximately every 2 months, the residues of semen samples collected were sent for microbiology evaluation. The samples were typically leftover portions from freshly collected specimens of men undergoing fertility evaluations. Men were advised to abstain from intercourse 3 to 5 days prior to collection, wash their hands and genitals thoroughly before sample production, and produce the sample into a sterile specimen cup. Isolates were then examined for sensitivity to a panel of antibiotics. The results were divided into two separate 5-year intervals (the first beginning in 2006, the second in 2011) and compared. Results were reported as proportions, and chi-square tests were used in the group comparisons. Student's t tests were used to analyze the parametric data.

RESULTS

A total of 75 semen samples were evaluated during a 10-year interval beginning in 2006. Three samples were found to have >1 million white blood cells/mL, which could be consistent with an active genitourinary infection. Subsequently, these patients were excluded. Of the 72 remaining samples, 70 (97%) had 1 to 4 isolates of bacteria (mean 2.4). Semen characteristics did not differ between the two groups. Streptococcus and Staphylococcus were the most prevalent bacteria, growing in 52% to 69% of the specimens (Table 1). No statistically significant differences existed in the types and prevalence of bacteria between the early and late intervals.

Table 1.

Semen samples studied in the two time periods

Variable
2006–2010
2011–2015
P value
Semen samples 39 33  
Sperm concentration (million/mL) 66.4 70.8 0.71
Semen volume (mL) 3.9 3.0 0.06
Progressive motility (%) 42.1 43.7 0.40
Samples without isolates 1 (3%) 1 (3%) 0.90
Number of isolates per sample 2.4 2.4 0.97
Isolates found in samples      
Streptococcus species 27 (69%) 17 (52%) 0.12
Staphylococcus species 25 (64%) 20 (61%) 0.76
Lactobacillus species 3 (8%) 4 (12%) 0.53
Enterococcus species 7 (18%) 8 (24%) 0.51
Corynebacterium species 10 (26%) 11 (33%) 0.47
 Others (infrequent) 14 (36%) 11 (33%) 0.82

The resistance data (Table 2) for these two pathogens showed minimal statistically significant difference between the two time periods. In the recent interval, Staphylococcus was more susceptible to erythromycin (P = 0.009), and a trend toward increasing resistance of Staphylococcus to penicillin and ampicillin/sulbactam was observed.

Table 2.

Resistance profiles of bacteria found in semen in the two time periods

    2006–2010
2011–2015
 
Isolates
Antibiotic family
Sensitive
Intermediate
Resistant
Sensitive
Intermediate
Resistant
P value
Streptococcus Penicillin 83% 17% 0% 87% 13% 0% 0.81
  Ampicillin/sulbactam 100% 0% 0% 100% 0% 0% 1
  Erythromycin 58% 0% 42% 47% 0% 53% 0.55
Staphylococcus Penicillin 25% 0% 75% 0% 0% 100% 0.11
  Ampicillin/sulbactam 87% 0% 13% 67% 0% 33% 0.35
  Erythromycin 13% 12% 75% 79% 0% 21% 0.009

DISCUSSION

During a recent 10-year interval, the majority of a patient subset providing semen for infertility evaluation at our institution was found to have bacterial contamination, which is consistent with reported data.4 Based on our results, the species of bacteria remained relatively unchanged over time. As mentioned previously, bacterial contamination of semen is common and frequently results from commensal bacteria on the glans, urethra, or hands.6 In fact, one study found that up to 71% of bacteria that normally colonize the glans are also present in the distal urethra.7 However, there is some debate as to the clinical implications of bacteriospermia. It is believed that infectious etiologies may be involved in approximately 15% of male subfertility cases,8 possibly the result of reactive oxygen species,9 increased rates of DNA fragmentation,10 and/or alterations in the function and morphology of sperm.11 Certain types of bacteria, including Mycoplasma, Ureaplasma, Escherichia coli, and Chlamydia trachomatis, may be more harmful to sperm function than others.11,12

Resistance patterns of bacteria in semen samples have not been frequently reported. In one study by Isaiah et al, semen samples of 140 men in Nigeria were examined, and 59% of the bacteria cultured were resistant to oxacillin.13 Kastrop et al observed microbial contamination in in vitro fertilization culture dishes and found that 20% of the bacteria were resistant to penicillin and that more than 90% of the specimens were resistant to at least one of the antibiotics used in the culture medium.14

In our data, the Staphylococcus species became more susceptible to erythromycin (P < 0.05), and there was a trend toward increasing resistance to penicillin and ampicillin/sulbactam that did not reach statistical significance. These particular antibiotics were chosen because they may be used in initial semen-diluting solutions and are classically associated with resistance development.5 Of note, though not reaching statistical significance, there was an increase of resistance to penicillin among the Staphylococcus isolates, reflecting the increasing incidence of methicillin-resistant Staphylococcus aureus. It is estimated that colonization rates of S. aureus may approach 20% in the United States and that 1% to 3% of the population is colonized with methicillin-resistant S. aureus.15 Penicillin is currently used in our preparation of sperm cells; given these results, it may be prudent to alter our diluting solutions.

The limitations of this study include its retrospective nature and small sample size. Furthermore, though semen suspension media may include other antibiotics, such as streptomycin or gentamicin, it may be of benefit to perform similar analyses that include these antibiotics. Thus, though further studies are needed, this study adds to the existing body of evidence regarding resistance patterns of bacteria in sperm and suggests that it may be prudent to take into account the increasing resistance of S. aureus in the processing of semen samples.

FUNDING

The study was supported by the TJK Noble Centennial Chair Endowment for Research in Obstetrics and Gynecology.

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