The aldoximes (E)-1-naphthaldehyde oxime (I) and E-phenanthrene-9-carbaldehyde oxime (II) were synthesized and characterized using NMR and XRD. The crystal structures of both (I) and (II) are similar with a single intermolecular O—H⋯N hydrogen-bonding interaction, giving rise to the formation of one-dimensional polymeric chains extending along the 21 (b) screw axes in each.
Keywords: crystal structure, aromatic aldehydes, E-aldoximes, hydrogen bonding
Abstract
The aldoximes C11H9NO (I) and C15H11NO (II), synthesized in ca 90% yield, by treatment of 1-naphthaldehyde or phenanthrene-9-carbaldehyde, respectively, with hydroxylamine hydrochloride and sodium carbonate, have been characterized by IR, 1H, 13C and DEPT-135 NMR spectroscopies, and also by single-crystal X-ray diffraction analysis. The molecules of (I) and (II) are conformationally similar, with the aldoxime substituent groups lying outside the planes of the naphthalene or phenanthrene rings, forming dihedral angles with them of 23.9 (4) and 27.9 (6)°, respectively. The crystal structures of both (I) and (II) are similar with a single intermolecular O—H⋯N hydrogen-bonding interaction, giving rise to the formation of one-dimensional polymeric chains extending along the 21 (b) screw axes in each.
Chemical context
Oxime compounds have found many applications; for example in the medical field, they are used as antidotes for nerve agents (Kassa, 2002 ▸). Oximes are also used as intermediates in the industrial production of caprolactam, a precursor to Nylon 6 (Ritz et al., 2012 ▸). Oximes, HO—N=CR
1
R
2, are also valuable and simple reagents containing the O—N=C moiety (Kukushkin & Pombeiro, 1999 ▸), which easily adds to nitrile ligands, to form a variety of nitrogen-containing products e.g. iminoacylated compounds (Kopylovich et al., 2009 ▸; Lasri et al., 2007 ▸, 2008 ▸), amidines (Kopylovich et al., 2001 ▸), carboxamides (Kopylovich et al., 2002 ▸), phthalocyanines (Kopylovich et al., 2004 ▸), or 1,3,5-triazapentadiene species (Kopylovich et al., 2007 ▸). In this work, we report the synthesis and crystal structures of two aldoximes, viz. (E)-1-naphthaldehyde oxime (I) and (E)-phenanthrene-9-carbaldehyde oxime (II), by treatment of 1-naphthaldehyde or phenanthrene-9-carbaldehyde, respectively, with hydroxylamine hydrochloride and sodium carbonate.
Structural commentary
The title compounds (I) and (II) both crystallize in the non-centrosymmetric monoclinic space group P21 with Z = 2, with similar unit-cell parameters. The asymmetric unit contents for each are shown in Figs. 1 ▸ and 2 ▸. Compound (I) comprises a naphthalene unit functionalized with an aldoxime group at position 1. The naphthalene unit is, as expected, essentially planar but the plane containing the aldoxime atoms lies significantly out of the naphthalene plane [torsion angle N1—C11—C1—C2 = 23.6 (6)°] (Table 1 ▸). In the case of compound (II), the plane of the aldoxime group lies similarly out-of-plane with the phenanthrene ring system [comparative torsion angle N1—C11—C9—C10 = 27.6 (4)°], corresponding to dihedral angles between the two planes of 23.9 (4) and 27.9 (5)° for (I) and (II), respectively. The aldoxime group shows similar bond lengths for both structures: 1.395 (5) and 1.405 (3) Å for O1—N1, 1.273 (5) and 1.268 (3) Å for N1—C11, 1.461 (6) and 1.466 (4) Å for C1—C11 or C9—C11, for (I) and (II), respectively.
Figure 1.
The molecular conformation and atom-numbering scheme for (I), with non-H atoms represented as 30% probability ellipsoids.
Figure 2.
The molecular conformation and atom-numbering scheme for (II), with non-H atoms represented as 30% probability ellipsoids.
Table 1. Selected torsion angles (°) for the aldoxime groups in (I) and (II).
| Compound (I) | Compound (II) | |
|---|---|---|
| C1/C9—C11—N1—O1 | −175.5 (4) | −175.3 (2) |
| C2/C10—C1/C9—C11—N1 | 23.6 (6) | 27.6 (4) |
| C8′—C1—C11—N1 | −160.4 (4) | – |
| C8′—C9—C11—N1 | – | −156.1 (2) |
Supramolecular features
Similar intermolecular interactions are observed in the crystal structures of both (I) and (II). In each, molecules are linked through a single intermolecular O1—H⋯N1i hydrogen-bonding interaction [Tables 2 ▸ and 3 ▸ for (I) and (II), respectively]. These basic interactions are shown in Fig. 3 ▸, defining an oxime C(3) type II motif. It is well known that oximes are able to form different types of hydrogen-bonding motifs (Bruton et al., 2003 ▸). In the structures of both (I) and (II), the formation of a one-dimensional polymeric chain arrangement of molecules results, extending along the 21 (b) screw axes in each (Fig. 4 ▸).
Table 2. Hydrogen-bond geometry (Å, °) for (I) .
| D—H⋯A | D—H | H⋯A | D⋯A | D—H⋯A |
|---|---|---|---|---|
| O1—H1⋯N1i | 0.90 (6) | 1.94 (6) | 2.834 (5) | 177 (6) |
Symmetry code: (i)
.
Table 3. Hydrogen-bond geometry (Å, °) for (II) .
| D—H⋯A | D—H | H⋯A | D⋯A | D—H⋯A |
|---|---|---|---|---|
| O1—H⋯N1i | 0.88 (3) | 1.99 (3) | 2.852 (3) | 169 (3) |
Symmetry code: (i)
.
Figure 3.
Intermolecular hydrogen-bonding associations for (I) (left) and (II) (right), shown as dashed lines. Non-associative H atoms have been omitted for clarity.
Figure 4.
A packing diagram viewed along the a axis for (I) (top) and (II) (bottom), showing polymeric chain extensions.
Database survey
Many naphthalene-carbaldehyde oxime derivatives are present in the Cambridge Structural Database (Version 5.38; Groom et al. 2016 ▸) but no one crystal structure containing only an aldoxime group in position 1 of the naphthalene ring system has been reported. The most similar structures that can be found are LIVROY/LIVROY01 (Guo et al., 2008 ▸; Tarai & Baruah, 2016 ▸) with an additional hydroxyl group in position 2 and TIJPOS (Asaad et al., 2005 ▸) with a dimethylamino group in position 9. The most important difference between (I) and LIVROY/LIVROY01 are the two hydrogen bonds: one intramolecular O—H⋯N and another intermolecular O—H⋯O. As a result of the intramolecular hydrogen-bonding interaction, the aldoxime group in the latter compound is coplanar with the central naphthalene ring with a dihedral angle of 1.21° and torsion angles C1—C11—N1—O2 = 179.27, C3—C1—C11—N1 = −179.91 and C4—C1—C11—N1 = −0.76°. However, TIJPOS (Asaad et al., 2005 ▸), with just one type of intermolecular hydrogen bond, shows a rotation in the aldoxime group that is more dramatic than in (I) and (II) (Table 1 ▸), with a 40.35° deviation from the central naphthalene plane.
No examples of structures of phenanthrene-carbaldehyde oxime derivatives are present in the Cambridge Structural Database.
Synthesis and crystallization
The aldoximes (E)-1-naphthaldehyde oxime (I) and (E)-phenanthrene-9-carbaldehyde oxime (II) were synthesized, in ca 90% yield, by treatment of 1-naphthaldehyde or phenanthrene-9-carbaldehyde, respectively, with hydroxylamine hydrochloride and sodium carbonate in MeOH at room temperature. To a solution of hydroxylamine hydrochloride (41.6 mg, 0.60 mmol) in MeOH (10 ml) was added sodium carbonate (31.7 mg, 0.30 mmol). The reaction mixture was stirred at room temperature for 5 min. 1-Naphthaldehyde (85.0 mg, 0.54 mmol) or phenanthrene-9-carbaldehyde (112.2 mg, 0.54 mmol) was added and the reaction mixture was stirred at room temperature for 12 h. The precipitate formed was then filtered off and the filtrate was evaporated in vacuo. The crude residue was purified by column chromatography on silica (CHCl3 as the eluent, 50 ml), followed by evaporation of the solvent in vacuo to give the pure aldoximes [(I), 84 mg, 90% yield and (II), 107 mg, 89% yield] (see reaction scheme).
Single crystals of the aldoximes (I) and (II) suitable for X-ray diffraction were obtained by slow evaporation of their 10 ml CHCl3 solutions at room temperature. Compounds (I) and (II) were characterized by IR, 1H, 13C and DEPT-135 NMR spectroscopies and also by single crystal X-ray diffraction analysis.
In the IR spectra of (I) and (II), the characteristic bands at wavenumbers 3389 and 3200 cm−1 (O—H), and 1614 and 1607 cm-1 (C=N), confirm the formation of the aldoximes (I) and (II), respectively. In the 1H NMR spectra, we observed the absence of the signal of the aldehyde at ca 10 ppm and a new signal at ca 8.8 ppm due to the imine proton CH=N was detected. Moreover, in the 13C and DEPT-135 NMR spectra, the signal of the aldehyde at ca 190 ppm was not observed, and a new signal at ca 150 ppm due to the oxime carbon CH=NOH was detected, confirming the formation of the aldoximes (I) and (II).
( E )-1-naphthaldehyde oxime (I)
Yield: 90%. IR (cm−1): 3389 (OH), 1614 (C=N). 1H NMR (CDCl3), δ: 7.53 (t, J HH 7.5 Hz, 1H, CH aromatic), 7.56 (t, J HH 7.0 Hz, 1H, CH aromatic), 7.61 (t, J HH 7.0 Hz, 1H, CH aromatic), 7.82 (d, J HH 7.1 Hz, 1H, CH aromatic), 7.93 (t, J HH 8.1 Hz, 2H, CH aromatic), 8.48 (d, J HH 8.3 Hz, 1H, CH aromatic), 8.87 (s, 1H, CH=N). 13C NMR (CDCl3), δ: 124.2, 125.4, 126.2, 127.0, 127.1 (CHaromatic), 128.0 (Caromatic), 128.8, 130.6 (CHaromatic), 130.8, 133.8 (Caromatic), 150.0 (CH=N). DEPT-135 NMR (CDCl3), δ: 124.2, 125.4, 126.2, 127.0, 127.1, 128.8, 130.6 (CHaromatic), 150.0 (CH=N).
E -phenanthrene-9-carbaldehyde oxime (II)
Yield: 89%. IR (cm−1): 3200 (OH), 1607 (C=N). 1H NMR (CDCl3), δ: 7.64 (t, J HH 7.9 Hz, 1H, CH aromatic), 7.68–7.75 (m, 3H, CH aromatic), 7.94 (d, J HH 7.9 Hz, 1H, CH aromatic), 8.04 (s, 1H, CH aromatic), 8.62 (d, J HH 7.9 Hz, 1H, CH aromatic), 8.70 (d, J HH 8.2 Hz, 1H, CH aromatic), 8.77 (d, J HH 8.2 Hz, 1H, CH aromatic), 8.85 (s, 1H, CH=N). 13C NMR (CDCl3), δ: 122.6, 123.1, 125.4 (CHaromatic), 126.8 (Caromatic), 126.9, 127.0, 127.2, 127.9, 129.3 (CHaromatic), 130.7, 131.0, 131.1 (Caromatic), 150.8 (CH=N). DEPT-135 NMR (CDCl3), δ: 122.6, 123.1, 125.4, 126.9, 127.0, 127.2, 127.9, 129.3 (CHaromatic), 150.8 (CH=N).
Refinement
Crystal data, data collection and structure refinement details are summarized in Table 4 ▸. All C-bound H atoms were located in difference-Fourier maps but were subsequently treated as riding with C—H = 0.93 Å and with U iso(H) = 1.2U eq(C). The H atoms of the OH groups were positioned with idealized geometry and were refined freely in both structures.
Table 4. Experimental details.
| (I) | (II) | |
|---|---|---|
| Crystal data | ||
| Chemical formula | C11H9NO | C15H11NO |
| M r | 171.19 | 221.25 |
| Crystal system, space group | Monoclinic, P21 | Monoclinic, P21 |
| Temperature (K) | 295 | 295 |
| a, b, c (Å) | 7.928 (5), 4.843 (3), 11.444 (7) | 8.2397 (8), 4.9728 (5), 13.9332 (14) |
| β (°) | 94.03 (5) | 106.680 (7) |
| V (Å3) | 438.3 (5) | 546.88 (10) |
| Z | 2 | 2 |
| Radiation type | Mo Kα | Mo Kα |
| μ (mm−1) | 0.08 | 0.09 |
| Crystal size (mm) | 0.10 × 0.06 × 0.02 | 0.16 × 0.09 × 0.05 |
| Data collection | ||
| Diffractometer | Bruker D8 Quest | Bruker D8 Quest |
| Absorption correction | Multi-scan (SADABS; Bruker, 2016 ▸) | Multi-scan (SADABS; Bruker, 2016 ▸) |
| T min, T max | 0.684, 0.745 | 0.698, 0.745 |
| No. of measured, independent and observed [I > 2σ(I)] reflections | 5762, 1570, 957 | 7330, 1988, 1509 |
| R int | 0.100 | 0.053 |
| (sin θ/λ)max (Å−1) | 0.603 | 0.602 |
| Refinement | ||
| R[F 2 > 2σ(F 2)], wR(F 2), S | 0.055, 0.098, 1.06 | 0.040, 0.093, 1.04 |
| No. of reflections | 1570 | 1988 |
| No. of parameters | 122 | 159 |
| No. of restraints | 1 | 1 |
| H-atom treatment | H atoms treated by a mixture of independent and constrained refinement | H atoms treated by a mixture of independent and constrained refinement |
| Δρmax, Δρmin (e Å−3) | 0.15, −0.15 | 0.15, −0.15 |
Supplementary Material
Crystal structure: contains datablock(s) I, II, global. DOI: 10.1107/S2056989018002116/zs2397sup1.cif
Structure factors: contains datablock(s) I. DOI: 10.1107/S2056989018002116/zs2397Isup4.hkl
Structure factors: contains datablock(s) II. DOI: 10.1107/S2056989018002116/zs2397IIsup5.hkl
Supporting information file. DOI: 10.1107/S2056989018002116/zs2397Isup4.cml
Supporting information file. DOI: 10.1107/S2056989018002116/zs2397IIsup5.cml
Additional supporting information: crystallographic information; 3D view; checkCIF report
supplementary crystallographic information
(E)-1-Naphthaldehyde oxime (I) . Crystal data
| C11H9NO | F(000) = 180 |
| Mr = 171.19 | Dx = 1.297 Mg m−3 |
| Monoclinic, P21 | Mo Kα radiation, λ = 0.71073 Å |
| a = 7.928 (5) Å | Cell parameters from 1367 reflections |
| b = 4.843 (3) Å | θ = 2.6–22.6° |
| c = 11.444 (7) Å | µ = 0.08 mm−1 |
| β = 94.03 (5)° | T = 295 K |
| V = 438.3 (5) Å3 | Block, colourless |
| Z = 2 | 0.10 × 0.06 × 0.02 mm |
(E)-1-Naphthaldehyde oxime (I) . Data collection
| Bruker D8 Quest diffractometer | 957 reflections with I > 2σ(I) |
| φ and ω scans | Rint = 0.100 |
| Absorption correction: multi-scan (SADABS; Bruker, 2016) | θmax = 25.4°, θmin = 2.6° |
| Tmin = 0.684, Tmax = 0.745 | h = −9→9 |
| 5762 measured reflections | k = −5→5 |
| 1570 independent reflections | l = −13→13 |
(E)-1-Naphthaldehyde oxime (I) . Refinement
| Refinement on F2 | 1 restraint |
| Least-squares matrix: full | Hydrogen site location: mixed |
| R[F2 > 2σ(F2)] = 0.055 | H atoms treated by a mixture of independent and constrained refinement |
| wR(F2) = 0.098 | w = 1/[σ2(Fo2) + (0.0164P)2 + 0.1408P] where P = (Fo2 + 2Fc2)/3 |
| S = 1.06 | (Δ/σ)max < 0.001 |
| 1570 reflections | Δρmax = 0.15 e Å−3 |
| 122 parameters | Δρmin = −0.15 e Å−3 |
(E)-1-Naphthaldehyde oxime (I) . Special details
| Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
(E)-1-Naphthaldehyde oxime (I) . Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)
| x | y | z | Uiso*/Ueq | ||
| O1 | 0.8254 (4) | −0.0401 (7) | 0.5056 (3) | 0.0458 (9) | |
| N1 | 0.8708 (5) | 0.1715 (9) | 0.4312 (3) | 0.0418 (11) | |
| C1 | 0.7559 (5) | 0.4959 (10) | 0.2895 (4) | 0.0318 (12) | |
| C2 | 0.8998 (6) | 0.5156 (11) | 0.2295 (4) | 0.0452 (14) | |
| H2 | 0.9903 | 0.3987 | 0.2494 | 0.054* | |
| C3 | 0.9129 (7) | 0.7072 (14) | 0.1393 (5) | 0.0569 (16) | |
| H3 | 1.0128 | 0.7207 | 0.1017 | 0.068* | |
| C4 | 0.7801 (7) | 0.8737 (11) | 0.1066 (4) | 0.0499 (15) | |
| H4 | 0.7888 | 0.9970 | 0.0450 | 0.060* | |
| C4' | 0.6296 (6) | 0.8624 (10) | 0.1645 (4) | 0.0377 (12) | |
| C5 | 0.4924 (6) | 1.0383 (10) | 0.1338 (4) | 0.0468 (15) | |
| H5 | 0.5009 | 1.1626 | 0.0726 | 0.056* | |
| C6 | 0.3485 (7) | 1.0323 (12) | 0.1907 (5) | 0.0570 (17) | |
| H6 | 0.2585 | 1.1479 | 0.1677 | 0.068* | |
| C7 | 0.3370 (6) | 0.8491 (11) | 0.2846 (4) | 0.0478 (15) | |
| H7 | 0.2393 | 0.8461 | 0.3250 | 0.057* | |
| C8 | 0.4663 (5) | 0.6760 (11) | 0.3176 (4) | 0.0387 (13) | |
| H8 | 0.4557 | 0.5558 | 0.3800 | 0.046* | |
| C8' | 0.6172 (5) | 0.6760 (10) | 0.2582 (4) | 0.0285 (11) | |
| C11 | 0.7413 (6) | 0.2826 (9) | 0.3785 (4) | 0.0350 (12) | |
| H11 | 0.6343 | 0.2264 | 0.3972 | 0.042* | |
| H1 | 0.922 (7) | −0.129 (13) | 0.528 (5) | 0.10 (2)* |
(E)-1-Naphthaldehyde oxime (I) . Atomic displacement parameters (Å2)
| U11 | U22 | U33 | U12 | U13 | U23 | |
| O1 | 0.041 (2) | 0.044 (2) | 0.051 (2) | 0.008 (2) | −0.0047 (18) | 0.008 (2) |
| N1 | 0.040 (2) | 0.038 (3) | 0.046 (3) | 0.001 (2) | −0.005 (2) | −0.005 (2) |
| C1 | 0.033 (3) | 0.029 (3) | 0.033 (3) | −0.007 (3) | −0.002 (2) | −0.007 (3) |
| C2 | 0.035 (3) | 0.054 (4) | 0.048 (3) | −0.005 (3) | 0.009 (2) | −0.014 (3) |
| C3 | 0.051 (3) | 0.080 (5) | 0.043 (3) | −0.018 (4) | 0.021 (3) | −0.012 (4) |
| C4 | 0.064 (4) | 0.051 (4) | 0.036 (3) | −0.017 (3) | 0.011 (3) | −0.005 (3) |
| C4' | 0.046 (3) | 0.037 (3) | 0.029 (3) | −0.008 (3) | −0.003 (2) | −0.007 (3) |
| C5 | 0.060 (4) | 0.037 (4) | 0.041 (3) | −0.009 (3) | −0.011 (3) | 0.008 (3) |
| C6 | 0.049 (3) | 0.049 (4) | 0.070 (4) | 0.006 (3) | −0.013 (3) | 0.008 (4) |
| C7 | 0.035 (3) | 0.048 (4) | 0.060 (4) | 0.002 (3) | 0.000 (3) | 0.009 (3) |
| C8 | 0.036 (3) | 0.039 (3) | 0.040 (3) | 0.002 (3) | −0.002 (2) | 0.008 (3) |
| C8' | 0.029 (2) | 0.027 (3) | 0.029 (3) | −0.004 (2) | −0.0016 (19) | −0.008 (3) |
| C11 | 0.032 (3) | 0.029 (3) | 0.044 (3) | 0.002 (2) | 0.003 (2) | −0.008 (3) |
(E)-1-Naphthaldehyde oxime (I) . Geometric parameters (Å, º)
| O1—N1 | 1.395 (5) | C4'—C5 | 1.407 (6) |
| O1—H1 | 0.90 (6) | C4'—C8' | 1.410 (6) |
| N1—C11 | 1.273 (5) | C5—C6 | 1.353 (6) |
| C1—C2 | 1.375 (6) | C5—H5 | 0.9300 |
| C1—C8' | 1.429 (6) | C6—C7 | 1.402 (7) |
| C1—C11 | 1.461 (6) | C6—H6 | 0.9300 |
| C2—C3 | 1.397 (7) | C7—C8 | 1.357 (6) |
| C2—H2 | 0.9300 | C7—H7 | 0.9300 |
| C3—C4 | 1.358 (7) | C8—C8' | 1.417 (5) |
| C3—H3 | 0.9300 | C8—H8 | 0.9300 |
| C4—C4' | 1.406 (6) | C11—H11 | 0.9300 |
| C4—H4 | 0.9300 | ||
| N1—O1—H1 | 106 (4) | C6—C5—H5 | 119.0 |
| C11—N1—O1 | 111.5 (4) | C4'—C5—H5 | 119.0 |
| C2—C1—C8' | 118.9 (4) | C5—C6—C7 | 119.0 (5) |
| C2—C1—C11 | 120.4 (5) | C5—C6—H6 | 120.5 |
| C8'—C1—C11 | 120.6 (4) | C7—C6—H6 | 120.5 |
| C1—C2—C3 | 121.5 (5) | C8—C7—C6 | 121.0 (5) |
| C1—C2—H2 | 119.3 | C8—C7—H7 | 119.5 |
| C3—C2—H2 | 119.3 | C6—C7—H7 | 119.5 |
| C4—C3—C2 | 120.1 (5) | C7—C8—C8' | 120.9 (5) |
| C4—C3—H3 | 119.9 | C7—C8—H8 | 119.5 |
| C2—C3—H3 | 119.9 | C8'—C8—H8 | 119.5 |
| C3—C4—C4' | 120.9 (5) | C4'—C8'—C8 | 118.1 (4) |
| C3—C4—H4 | 119.5 | C4'—C8'—C1 | 119.2 (4) |
| C4'—C4—H4 | 119.5 | C8—C8'—C1 | 122.7 (4) |
| C4—C4'—C5 | 121.7 (5) | N1—C11—C1 | 121.9 (4) |
| C4—C4'—C8' | 119.3 (5) | N1—C11—H11 | 119.0 |
| C5—C4'—C8' | 118.9 (4) | C1—C11—H11 | 119.0 |
| C6—C5—C4' | 122.0 (5) | ||
| C8'—C1—C2—C3 | 0.1 (7) | C5—C4'—C8'—C8 | −0.3 (6) |
| C11—C1—C2—C3 | 176.2 (5) | C4—C4'—C8'—C1 | −2.1 (6) |
| C1—C2—C3—C4 | −2.0 (8) | C5—C4'—C8'—C1 | 179.7 (4) |
| C2—C3—C4—C4' | 1.8 (8) | C7—C8—C8'—C4' | 0.5 (7) |
| C3—C4—C4'—C5 | 178.3 (5) | C7—C8—C8'—C1 | −179.6 (4) |
| C3—C4—C4'—C8' | 0.3 (7) | C2—C1—C8'—C4' | 1.9 (6) |
| C4—C4'—C5—C6 | −178.7 (5) | C11—C1—C8'—C4' | −174.2 (4) |
| C8'—C4'—C5—C6 | −0.6 (7) | C2—C1—C8'—C8 | −178.0 (4) |
| C4'—C5—C6—C7 | 1.3 (8) | C11—C1—C8'—C8 | 5.9 (6) |
| C5—C6—C7—C8 | −1.2 (8) | O1—N1—C11—C1 | −175.5 (4) |
| C6—C7—C8—C8' | 0.2 (7) | C2—C1—C11—N1 | 23.6 (6) |
| C4—C4'—C8'—C8 | 177.8 (4) | C8'—C1—C11—N1 | −160.4 (4) |
(E)-1-Naphthaldehyde oxime (I) . Hydrogen-bond geometry (Å, º)
| D—H···A | D—H | H···A | D···A | D—H···A |
| O1—H1···N1i | 0.90 (6) | 1.94 (6) | 2.834 (5) | 177 (6) |
Symmetry code: (i) −x+2, y−1/2, −z+1.
(E)-Phenanthrene-9-carbaldehyde oxime (II) . Crystal data
| C15H11NO | F(000) = 232 |
| Mr = 221.25 | Dx = 1.344 Mg m−3 |
| Monoclinic, P21 | Mo Kα radiation, λ = 0.71073 Å |
| a = 8.2397 (8) Å | Cell parameters from 2141 reflections |
| b = 4.9728 (5) Å | θ = 2.6–24.9° |
| c = 13.9332 (14) Å | µ = 0.09 mm−1 |
| β = 106.680 (7)° | T = 295 K |
| V = 546.88 (10) Å3 | Block, colourless |
| Z = 2 | 0.16 × 0.09 × 0.05 mm |
(E)-Phenanthrene-9-carbaldehyde oxime (II) . Data collection
| Bruker D8 Quest diffractometer | 1509 reflections with I > 2σ(I) |
| φ and ω scans | Rint = 0.053 |
| Absorption correction: multi-scan (SADABS; Bruker, 2016) | θmax = 25.3°, θmin = 2.6° |
| Tmin = 0.698, Tmax = 0.745 | h = −9→9 |
| 7330 measured reflections | k = −5→5 |
| 1988 independent reflections | l = −16→16 |
(E)-Phenanthrene-9-carbaldehyde oxime (II) . Refinement
| Refinement on F2 | Hydrogen site location: mixed |
| Least-squares matrix: full | H atoms treated by a mixture of independent and constrained refinement |
| R[F2 > 2σ(F2)] = 0.040 | w = 1/[σ2(Fo2) + (0.0478P)2] where P = (Fo2 + 2Fc2)/3 |
| wR(F2) = 0.093 | (Δ/σ)max < 0.001 |
| S = 1.04 | Δρmax = 0.15 e Å−3 |
| 1988 reflections | Δρmin = −0.15 e Å−3 |
| 159 parameters | Extinction correction: SHELXL2016 (Sheldrick, 2015b), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
| 1 restraint | Extinction coefficient: 0.058 (11) |
(E)-Phenanthrene-9-carbaldehyde oxime (II) . Special details
| Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes. |
(E)-Phenanthrene-9-carbaldehyde oxime (II) . Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)
| x | y | z | Uiso*/Ueq | ||
| O1 | 0.3294 (3) | 1.0407 (5) | 0.49418 (15) | 0.0446 (6) | |
| N1 | 0.4084 (3) | 0.8293 (5) | 0.55737 (16) | 0.0371 (6) | |
| C11 | 0.3086 (4) | 0.7264 (5) | 0.6016 (2) | 0.0340 (7) | |
| H11 | 0.197024 | 0.785637 | 0.585614 | 0.041* | |
| C9 | 0.3660 (3) | 0.5157 (6) | 0.67732 (18) | 0.0322 (7) | |
| C10 | 0.5314 (4) | 0.5027 (7) | 0.7316 (2) | 0.0366 (7) | |
| H10 | 0.607395 | 0.622514 | 0.716727 | 0.044* | |
| C10' | 0.5935 (3) | 0.3140 (6) | 0.81023 (19) | 0.0349 (7) | |
| C1 | 0.7655 (4) | 0.3096 (7) | 0.8651 (2) | 0.0472 (8) | |
| H1 | 0.840812 | 0.427685 | 0.848577 | 0.057* | |
| C2 | 0.8232 (4) | 0.1335 (8) | 0.9426 (2) | 0.0510 (9) | |
| H2 | 0.937339 | 0.131717 | 0.978623 | 0.061* | |
| C3 | 0.7116 (4) | −0.0423 (7) | 0.9676 (2) | 0.0481 (9) | |
| H3 | 0.751583 | −0.162219 | 1.020293 | 0.058* | |
| C4 | 0.5438 (4) | −0.0424 (6) | 0.9159 (2) | 0.0445 (8) | |
| H4 | 0.470941 | −0.162230 | 0.933886 | 0.053* | |
| C4' | 0.4792 (4) | 0.1366 (6) | 0.83561 (19) | 0.0333 (7) | |
| C5' | 0.3013 (4) | 0.1442 (6) | 0.77844 (19) | 0.0334 (7) | |
| C5 | 0.1811 (4) | −0.0332 (6) | 0.7975 (2) | 0.0431 (8) | |
| H5 | 0.215809 | −0.156417 | 0.849626 | 0.052* | |
| C6 | 0.0153 (4) | −0.0300 (7) | 0.7419 (3) | 0.0499 (9) | |
| H6 | −0.061247 | −0.149898 | 0.756119 | 0.060* | |
| C7 | −0.0389 (4) | 0.1524 (7) | 0.6641 (2) | 0.0499 (9) | |
| H7 | −0.151904 | 0.154288 | 0.626056 | 0.060* | |
| C8 | 0.0728 (4) | 0.3292 (7) | 0.6429 (2) | 0.0424 (8) | |
| H8 | 0.034520 | 0.451063 | 0.590667 | 0.051* | |
| C8' | 0.2453 (3) | 0.3306 (6) | 0.69893 (19) | 0.0317 (7) | |
| H | 0.413 (4) | 1.109 (7) | 0.475 (2) | 0.061 (12)* |
(E)-Phenanthrene-9-carbaldehyde oxime (II) . Atomic displacement parameters (Å2)
| U11 | U22 | U33 | U12 | U13 | U23 | |
| O1 | 0.0474 (13) | 0.0426 (14) | 0.0448 (12) | 0.0035 (11) | 0.0145 (10) | 0.0153 (11) |
| N1 | 0.0446 (14) | 0.0344 (14) | 0.0343 (13) | 0.0040 (13) | 0.0142 (11) | 0.0020 (12) |
| C11 | 0.0375 (16) | 0.0301 (17) | 0.0356 (15) | 0.0031 (14) | 0.0127 (13) | −0.0001 (13) |
| C9 | 0.0408 (16) | 0.0295 (16) | 0.0284 (14) | 0.0016 (16) | 0.0131 (12) | −0.0015 (14) |
| C10 | 0.0416 (16) | 0.0334 (17) | 0.0352 (14) | −0.0037 (15) | 0.0116 (12) | 0.0008 (15) |
| C10' | 0.0427 (16) | 0.0307 (16) | 0.0313 (14) | 0.0026 (15) | 0.0106 (12) | −0.0056 (14) |
| C1 | 0.0453 (18) | 0.046 (2) | 0.0475 (18) | 0.0005 (19) | 0.0093 (14) | 0.0020 (17) |
| C2 | 0.0461 (19) | 0.053 (2) | 0.0475 (19) | 0.0078 (18) | 0.0024 (15) | −0.0014 (17) |
| C3 | 0.060 (2) | 0.044 (2) | 0.0371 (17) | 0.0147 (18) | 0.0089 (15) | 0.0060 (15) |
| C4 | 0.0555 (19) | 0.041 (2) | 0.0390 (17) | 0.0035 (17) | 0.0168 (14) | 0.0040 (15) |
| C4' | 0.0464 (17) | 0.0265 (15) | 0.0294 (14) | 0.0033 (15) | 0.0149 (13) | −0.0035 (13) |
| C5' | 0.0432 (16) | 0.0297 (15) | 0.0306 (14) | 0.0021 (15) | 0.0157 (12) | −0.0040 (14) |
| C5 | 0.0552 (19) | 0.036 (2) | 0.0441 (18) | −0.0002 (17) | 0.0247 (15) | 0.0039 (15) |
| C6 | 0.0458 (19) | 0.047 (2) | 0.065 (2) | −0.0071 (18) | 0.0282 (16) | 0.0019 (18) |
| C7 | 0.0401 (18) | 0.051 (2) | 0.059 (2) | −0.0031 (18) | 0.0148 (15) | 0.0046 (19) |
| C8 | 0.0440 (18) | 0.0402 (18) | 0.0413 (17) | 0.0011 (17) | 0.0096 (14) | 0.0018 (16) |
| C8' | 0.0386 (15) | 0.0285 (15) | 0.0305 (14) | 0.0027 (15) | 0.0139 (12) | −0.0031 (14) |
(E)-Phenanthrene-9-carbaldehyde oxime (II) . Geometric parameters (Å, º)
| O1—N1 | 1.405 (3) | C3—C4 | 1.363 (4) |
| O1—H | 0.88 (3) | C3—H3 | 0.9300 |
| N1—C11 | 1.268 (3) | C4—C4' | 1.409 (4) |
| C11—C9 | 1.466 (4) | C4—H4 | 0.9300 |
| C11—H11 | 0.9300 | C4'—C5' | 1.454 (4) |
| C9—C10 | 1.357 (3) | C5'—C5 | 1.408 (4) |
| C9—C8' | 1.448 (4) | C5'—C8' | 1.416 (4) |
| C10—C10' | 1.422 (4) | C5—C6 | 1.364 (4) |
| C10—H10 | 0.9300 | C5—H5 | 0.9300 |
| C10'—C1 | 1.405 (4) | C6—C7 | 1.385 (4) |
| C10'—C4' | 1.408 (4) | C6—H6 | 0.9300 |
| C1—C2 | 1.365 (4) | C7—C8 | 1.365 (4) |
| C1—H1 | 0.9300 | C7—H7 | 0.9300 |
| C2—C3 | 1.384 (5) | C8—C8' | 1.412 (4) |
| C2—H2 | 0.9300 | C8—H8 | 0.9300 |
| N1—O1—H | 102 (2) | C3—C4—H4 | 119.5 |
| C11—N1—O1 | 110.9 (2) | C4'—C4—H4 | 119.5 |
| N1—C11—C9 | 121.2 (3) | C10'—C4'—C4 | 117.9 (2) |
| N1—C11—H11 | 119.4 | C10'—C4'—C5' | 119.2 (2) |
| C9—C11—H11 | 119.4 | C4—C4'—C5' | 122.9 (3) |
| C10—C9—C8' | 119.6 (2) | C5—C5'—C8' | 118.0 (2) |
| C10—C9—C11 | 120.0 (3) | C5—C5'—C4' | 122.2 (3) |
| C8'—C9—C11 | 120.4 (2) | C8'—C5'—C4' | 119.8 (2) |
| C9—C10—C10' | 122.9 (3) | C6—C5—C5' | 122.0 (3) |
| C9—C10—H10 | 118.6 | C6—C5—H5 | 119.0 |
| C10'—C10—H10 | 118.6 | C5'—C5—H5 | 119.0 |
| C1—C10'—C4' | 119.8 (3) | C5—C6—C7 | 119.9 (3) |
| C1—C10'—C10 | 120.9 (3) | C5—C6—H6 | 120.1 |
| C4'—C10'—C10 | 119.2 (2) | C7—C6—H6 | 120.1 |
| C2—C1—C10' | 120.6 (3) | C8—C7—C6 | 120.3 (3) |
| C2—C1—H1 | 119.7 | C8—C7—H7 | 119.8 |
| C10'—C1—H1 | 119.7 | C6—C7—H7 | 119.8 |
| C1—C2—C3 | 119.9 (3) | C7—C8—C8' | 121.2 (3) |
| C1—C2—H2 | 120.1 | C7—C8—H8 | 119.4 |
| C3—C2—H2 | 120.1 | C8'—C8—H8 | 119.4 |
| C4—C3—C2 | 120.9 (3) | C8—C8'—C5' | 118.6 (3) |
| C4—C3—H3 | 119.5 | C8—C8'—C9 | 122.0 (3) |
| C2—C3—H3 | 119.5 | C5'—C8'—C9 | 119.3 (2) |
| C3—C4—C4' | 120.9 (3) | ||
| O1—N1—C11—C9 | −175.3 (2) | C4—C4'—C5'—C5 | −1.9 (4) |
| N1—C11—C9—C10 | 27.6 (4) | C10'—C4'—C5'—C8' | −0.5 (4) |
| N1—C11—C9—C8' | −156.1 (2) | C4—C4'—C5'—C8' | 179.7 (3) |
| C8'—C9—C10—C10' | −0.2 (4) | C8'—C5'—C5—C6 | 0.2 (4) |
| C11—C9—C10—C10' | 176.1 (3) | C4'—C5'—C5—C6 | −178.2 (3) |
| C9—C10—C10'—C1 | −179.3 (3) | C5'—C5—C6—C7 | −0.1 (5) |
| C9—C10—C10'—C4' | −1.9 (4) | C5—C6—C7—C8 | −0.1 (5) |
| C4'—C10'—C1—C2 | 0.4 (5) | C6—C7—C8—C8' | 0.3 (5) |
| C10—C10'—C1—C2 | 177.9 (3) | C7—C8—C8'—C5' | −0.2 (4) |
| C10'—C1—C2—C3 | 0.0 (5) | C7—C8—C8'—C9 | 179.7 (3) |
| C1—C2—C3—C4 | −0.2 (5) | C5—C5'—C8'—C8 | −0.1 (4) |
| C2—C3—C4—C4' | 0.0 (5) | C4'—C5'—C8'—C8 | 178.4 (3) |
| C1—C10'—C4'—C4 | −0.5 (4) | C5—C5'—C8'—C9 | −179.9 (2) |
| C10—C10'—C4'—C4 | −178.1 (3) | C4'—C5'—C8'—C9 | −1.5 (4) |
| C1—C10'—C4'—C5' | 179.7 (3) | C10—C9—C8'—C8 | −178.0 (3) |
| C10—C10'—C4'—C5' | 2.2 (4) | C11—C9—C8'—C8 | 5.7 (4) |
| C3—C4—C4'—C10' | 0.3 (4) | C10—C9—C8'—C5' | 1.9 (4) |
| C3—C4—C4'—C5' | −179.9 (3) | C11—C9—C8'—C5' | −174.4 (2) |
| C10'—C4'—C5'—C5 | 177.8 (3) |
(E)-Phenanthrene-9-carbaldehyde oxime (II) . Hydrogen-bond geometry (Å, º)
| D—H···A | D—H | H···A | D···A | D—H···A |
| O1—H···N1i | 0.88 (3) | 1.99 (3) | 2.852 (3) | 169 (3) |
Symmetry code: (i) −x+1, y+1/2, −z+1.
Funding Statement
This work was funded by King Abdulaziz University grant G-100–662-37.
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Associated Data
This section collects any data citations, data availability statements, or supplementary materials included in this article.
Supplementary Materials
Crystal structure: contains datablock(s) I, II, global. DOI: 10.1107/S2056989018002116/zs2397sup1.cif
Structure factors: contains datablock(s) I. DOI: 10.1107/S2056989018002116/zs2397Isup4.hkl
Structure factors: contains datablock(s) II. DOI: 10.1107/S2056989018002116/zs2397IIsup5.hkl
Supporting information file. DOI: 10.1107/S2056989018002116/zs2397Isup4.cml
Supporting information file. DOI: 10.1107/S2056989018002116/zs2397IIsup5.cml
Additional supporting information: crystallographic information; 3D view; checkCIF report




