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Effect of word size and bubble size on de novo assembly, performed in CLC-GWB. (A) Effect of word size on contig assembly. (B) Effect of word size on RSEM-EVAL score of assembly. (C) Effect of bubble size on contig assembly. (D) Effect of bubble size on RSEM-EVAL score of assembly. (E) Contig assembly in response to changes in word size and bubble size. (F) Assembly RSEM-EVAL score in response to changes in word size and bubble size. W denotes word size and B denotes bubble size.
