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letter
. 2018 May 25;56(6):e00433-18. doi: 10.1128/JCM.00433-18

Emerging Rhizopus microsporus Infections in India

Mragnayani Pandey a,#, Gagandeep Singh a,#, Reshu Agarwal a,#, Yubhisha Dabas a, Viveka P Jyotsna b, Rakesh Kumar c, Immaculata Xess a,✉,#
Editor: Geoffrey A Landd
PMCID: PMC5971529  PMID: 29563203

LETTER

Mucormycosis is being increasingly reported all over the world. The high incidence of mucormycosis in India is due to a large population with uncontrolled diabetes and other immunocompromised states. Rhizopus oryzae had been reported as the most common etiological agent associated with human infections, followed by Rhizopus microsporus, in some studies in the Western literature (1, 2). However, in contrast to this, the second most common cause in India is Apophysomyces elegans (3). The first case of R. microsporus infection in India was reported by Bhansali et al. in 2004 (4). Since then, very few reports have been published (Table 1) (511). We report here an increase in the number of cases of infection due to R. microsporus in India.

TABLE 1.

Demographic and clinical details of cases included in the study

S. no.a Ageb/sex Residence in India/place of reporting case Yr Predisposing factor(s) Clinical diagnosisc Sample Treatment Outcome/morbidity Identification Source or reference
1 20/F Rajasthan 2015 Uncontrolled diabetes type I ROCM Nasal scraping Surgical debridement, liposomal amphotericin B Improved with loss of vision in left eye R. microsporus var. rhizopodiformis Present study
2 36/F Haryana 2015 Uncontrolled diabetes type II with diabetic ketoacidosis ROCM Nasal crust Surgical debridement, liposomal amphotericin B Expired after 1 day of therapy R. microsporus var. rhizopodiformis Present study
3 40/M Delhi 2015 Uncontrolled diabetes type II ROCM Paranasal sinus biopsy Surgical debridement, liposomal amphotericin B Expired after 28 days of therapy R. microsporus var. rhizopodiformis Present study
4 55/M Uttar Pradesh 2016 Uncontrolled diabetes, diabetic nephropathy with chronic kidney disease ROCM Orbital biopsy Surgical debridement, liposomal amphotericin B, posaconazole Improved with left orbital exenteration R. microsporus var. oligosporus Present study
5 18/M Uttar Pradesh 2016 Acute myeloid leukemia ROCM Nasal tissue Surgical debridement, liposomal amphotericin B Improved with right orbital exenteration R. microsporus var. rhizopodiformis Present study
6 42/M Uttar Pradesh 2016 Uncontrolled diabetes type II ROCM Nasal tissue Surgical debridement, liposomal amphotericin B Expired after 20 days of therapy R. microsporus var. rhizopodiformis Present study
7 50/M Haryana 2016 Uncontrolled diabetes, chronic kidney disease PM© Sputum Liposomal amphotericin B Improved after 25 days of therapy R. microsporus var. rhizopodiformis Present study
8 45/M Jharkhand 2016 Chronic myeloid leukemia ROCM Nasal tissue Surgical debridement, liposomal amphotericin B Improved after 17 days of therapy R. microsporus var. rhizopodiformis Present study
9 50/F Uttar Pradesh 2016 Uncontrolled diabetes type II ROCM Nasal biopsy Surgical debridement, liposomal amphotericin B Expired after 13 days of therapy R. microsporus var. rhizopodiformis Present study
10 55/F Uttar Pradesh 2016 Uncontrolled diabetes type II ROCM Nasal crust Surgical debridement, liposomal amphotericin B, posaconazole Improved with loss of vision in right eye R. microsporus var. rhizopodiformis Present study
11 44/M Bihar 2017 Uncontrolled diabetes, renal transplant recipient PM Sputum Liposomal amphotericin, posaconazole Expired after 15 days of therapy R. microsporus var. rhizopodiformis Present study
12 52/M Bihar 2017 Uncontrolled diabetes type II PM Lung biopsy Amphotericin B, posaconazole Improved after 15 days of therapy R. microsporus var. rhizopodiformis Present study
13 65/F Uttar Pradesh 2017 Uncontrolled diabetes type II PM Bronchoalveolar lavage Liposomal amphotericin B Improved after 25 days of therapy R. microsporus var. rhizopodiformis Present study
14 30/M Madhya Pradesh 2017 Uncontrolled diabetes, renal transplant recipient ROCM Nasal tissue Surgical debridement, liposomal amphotericin B Improved after 18 days of therapy R. microsporus var. rhizopodiformis Present study
15 53/F Delhi 2017 Uncontrolled diabetes type II ROCM Orbital and nasal tissue Surgical debridement, liposomal amphotericin B Expired after 21 days of therapy R. microsporus var. rhizopodiformis Present study
16 2 mo/M Uttar Pradesh 2017 Post-abdominal surgery CM* Tissue from abdomen No Expired before initiation of treatment R. microsporus var. rhizopodiformis Present study
17 28/M Delhi 2017 Acute lymphoblastic leukemia PM Endotracheal aspirate No Expired before initiation of treatment R. microsporus var. rhizopodiformis Present study
18 NA Chandigarh 2004 Diabetes mellitus ROCM NA NA NA R. microsporus var. rhizopodiformis 4
19 65/M Delhi 2006 Uncontrolled diabetes mellitus, hypertension ROCM Maxillary sinus tissue Surgical debridement, amphotericin B Cure R. microsporus 5
20 NA Chandigarh 2009 NA ROCM NA NA NA R. microsporus var. rhizopodiformis 6
21 56/M Delhi 2010 None CM Ulcer biopsy Surgical excision, amphotericin B Cure R. microsporus 7
22 40/F Madhya Pradesh 2012 None ROCM Right maxillary sinus tissue Surgical resection, liposomal amphotericin B Cure R. microsporus 8
23 39/M Pune 2014 Trauma CM Pus from hand Liposomal amphotericin B, posaconazole Cure R. microsporus 9
24 (n = 13)d NA Delhi 2014 NA ROCM (n = 7), PM (n = 6) Lung tissue (n = 3), bronchoalveolar lavage (n = 3), endotracheal aspirate (n = 2), nasal mass (n = 4), lung fine-needle aspiration biopsy (n = 2), sinus aspirate (n = 2), maxillary sinus aspirate (n = 1) NA NA R. microsporus (n = 1), R. microsporus var. rhizopodiformis (n = 10), R. microsporus var. oligosporus (n = 5), R. microsporus var. chinensis (n = 1) 10
25 NA Chandigarh 2015 NA ROCM NA NA Expired R. microsporus 11
a

S. no., serial number.

b

Age is given in years except where otherwise noted. NA, not available.

c

ROCM, rhino-orbitocerebral mucormycosis; PM, pulmonary mucormycosis; CM, cutaneous mucormycosis.

d

In this study, a total of 17 samples were collected from 13 patients.

In the present study, culture-positive cases of invasive mucormycosis from January 2015 to December 2017 were included. Before 2015, no case of infection due to R. microsporus was reported from our institute. The demographic details, findings of laboratory investigations, clinical course, and outcome were recorded. The outcome was considered improved when the patient was symptom free on discharge or when a marked reduction in lesions was seen either on radiological imaging or on clinical examination. Identification of R. microsporus was confirmed by sequencing of the internal transcribed spacer (ITS) region of ribosomal DNA (rDNA) (12). The phylogenetic relatedness of our isolates was evaluated with global isolates using the maximum likelihood method, with 500 bootstrap replicates implemented in MEGA v6.00. In vitro antifungal susceptibility testing was performed on these isolates as per Clinical and Laboratory Standards Institute (CLSI) document M38-A2 (13).

From 58 total culture-positive cases, 17 isolates were identified as R. microsporus. The most common variety isolated in our study was R. microsporus var. rhizopodiformis (16/17), followed by R. microsporus var. oligosporus (1/17). Among these patients, 11 were male and 6 were female. Based on the site of involvement, 11 cases were categorized as rhino-orbitocerebral (ROC), 5 as pulmonary, and 1 as cutaneous mucormycosis. Among 11 patients with ROC mucormycosis, 2 had sinonasal disease, and additional orbital extension was seen in 9 cases. Uncontrolled diabetes mellitus was the most common underlying predisposing condition (13/17), with comorbidities such as chronic kidney disease and renal transplantation observed in 2 cases each. Hematological malignancy was present in three cases and abdominal surgery in one case. Liposomal amphotericin B with or without surgical debridement was the mainstay of treatment in all the cases, except for two patients who succumbed before the initiation of antifungals. A fatal outcome was recorded in 47% of the cases (8/17). Nine patients improved after aggressive treatment. However, morbidity in the form of loss of vision (2/9) or orbital exenteration (2/9) was observed (Table 1). The MICs for the antifungals tested, viz., amphotericin B, itraconazole, and posaconazole, ranged from ≤0.03 to 0.5, 0.25 to 2, and ≤0.03 to 0.5 μg/ml, respectively. The ITS phylogenetic tree revealed that our isolates were clustered together in a group along with other type strains (Fig. 1).

FIG 1.

FIG 1

Maximum likelihood phylogenetic analysis of Rhizopus microsporus.

The present study shows an increasing number of infections due to R. microsporus in India over a short span of time. However, these cases just demonstrate the tip of the iceberg. The true incidence in India is still unknown, since many facilities lack mycological expertise, and identification using sequencing is not routinely performed due to financial constraints. Identification of Mucorales to species level holds significance for better understanding of current epidemiology. In addition, more studies on the environmental niches of R. microsporus in India are warranted.

Accession number(s).

All sequences determined in this study were submitted to GenBank under accession numbers MF176396 to MF176403 and MG972785 to MG972793.

ACKNOWLEDGMENTS

We are grateful to the Department of Biotechnology (DBT), Ministry of Science & Technology, India, for partial funding of the project (BT/PR5193/MED/29/463/2012) and to laboratory technologist Bhaskar Rana for maintaining the cultures.

We declare no conflict of interest.

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