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. Author manuscript; available in PMC: 2018 Jun 12.
Published in final edited form as: Virology. 2016 Aug 10;497:314–322. doi: 10.1016/j.virol.2016.08.002

Table 5.

Beta (β)-HPV DNA prevalence detected on the surface of other EGL cases and the normal genital skin of other EGL cases and controls, at the time of lesion detection (index visit), 6, and 12 months prior to lesion detection

HPV species/type Controls
n=38
Other EGLa
n=19


Normal genital skin Normal genital skin Other EGL



12mo prior 6mo prior Index visit 12mo prior 6mo prior Index visit Index visit



No. (%) No. (%) No. (%) No. (%) No. (%) No. (%) No. (%)
Any β-HPV type 32 (84.2) 34 (89.5) 34 (89.5) 17 (89.5) 16 (84.2) 16 (84.2) 13 (68.4)
 β1
  Any β1 28 (73.7) 28 (73.7) 27 (73.0) 14 (73.7) 14 (77.8) 12 (70.6) 9 (47.4)
  HPV5 10 (26.3) 11 (28.9) 6 (16.2) 5 (26.3) 5 (27.8) 4 (23.5) 4 (21.1)
  HPV8 8 (21.1) 7 (18.4) 9 (24.3) 3 (15.8) 3 (16.7) 3 (17.6) 1 (5.3)
  HPV12 8 (21.1) 8 (21.1) 10 (27.0) 6 (31.6) 7 (38.9) 5 (29.4) 4 (21.1)
  HPV14 3 (7.9) 5 (13.2) 5 (13.5) 5 (26.3) 3 (16.7) 0 (0) 0 (0)
  HPV19 0 (0) 0 (0) 0 (0) 0 (0) 0 (0) 0 (0) 0 (0)
  HPV20 0 (0) 0 (0) 0 (0) 2 (10.5) 3 (16.7) 3 (17.6) 1 (5.3)
  HPV21 2 (5.3) 6 (15.8) 4 (10.8) 1 (5.3) 1 (5.6) 1 (5.9) 2 (10.5)
  HPV24 14 (36.8) 9 (23.7) 13 (35.1) 8 (42.1) 8 (44.4) 8 (47.1) 1 (5.3)
  HPV25 2 (5.3) 1 (2.6) 1 (2.7) 1 (5.3) 0 (0) 0 (0) 0 (0)
  HPV36 4 (10.5) 7 (18.4) 4 (10.8) 2 (10.5) 3 (16.7) 1 (5.9) 2 (10.5)
  HPV47 13 (34.2) 10 (26.3) 12 (32.4) 1 (5.3) 2 (11.1) 5 (29.4) 1 (5.3)
  HPV93 0 (0) 0 (0) 1 (2.7) 1 (5.3) 1 (5.6) 0 (0) 1 (5.3)
 β2
  Any β2 15 (39.5) 17 (44.7) 18 (48.6) 16 (84.2) 13 (72.2) 8 (47.1) 5 (26.3)
  HPV9 2 (5.3) 2 (5.3) 2 (5.4) 5 (26.3) 1 (5.6) 2 (11.8) 2 (10.5)
  HPV15 2 (5.3) 1 (2.6) 1 (2.7) 1 (5.3) 2 (11.1) 1 (5.9) 0 (0)
  HPV17 4 (10.5) 6 (15.8) 4 (10.8) 5 (26.3) 5 (27.8) 3 (17.6) 2 (10.5)
  HPV22 5 (13.2) 7 (18.4) 7 (18.9) 4 (21.1) 5 (27.8) 3 (17.6) 3 (15.8)
  HPV23 6 (15.8) 7 (18.4) 6 (16.2) 6 (31.6) 4 (22.2) 1 (5.9) 1 (5.3)
  HPV37 0 (0) 0 (0) 0 (0) 3 (15.8) 1 (5.6) 2 (11.8) 1 (5.3)
  HPV38 3 (7.9) 4 (10.5) 3 (8.1) 7 (36.8) 4 (22.2) 1 (5.9) 3 (15.8)
  HPV80 3 (7.9) 4 (10.5) 4 (10.8) 3 (15.8) 3 (16.7) 2 (11.8) 1 (5.3)
 β3
  Any β3 1 (2.6) 1 (2.6) 1 (2.7) 6 (31.6) 5 (27.8) 1 (5.9) 2 (10.5)
  HPV49 1 (2.6) 0 (0) 1 (2.7) 2 (10.5) 3 (16.7) 0 (0) 1 (5.3)
  HPV75 0 (0) 1 (2.6) 0 (0) 4 (21.1) 3 (16.7) 0 (0) 2 (10.5)
  HPV76 0 (0) 0 (0) 0 (0) 4 (21.1) 1 (5.6) 1 (5.9) 0 (0)
 β4
  HPV92 2 (5.3) 2 (5.3) 2 (5.4) 1 (5.3) 1 (5.6) 1 (5.9) 0 (0)
 β5
  HPV96 2 (5.3) 1 (2.6) 3 (8.1) 4 (21.1) 3 (16.7) 1 (5.9) 3 (15.8)
Multiple β-HPV types
 ≥2 types 21 (55.3) 23 (60.5) 24 (63.2) 15 (78.9) 13 (68.4) 8 (42.1) 6 (31.6)

Note: Sample sizes change depending on specimen availability and validity of HPV results.

a

Includes various skin conditions thought to be unrelated to HPV infection, such as seborrheic keratosis and skin tags.