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. Author manuscript; available in PMC: 2018 Dec 1.
Published in final edited form as: Acad Radiol. 2017 Nov 6;24(12):1544–1555. doi: 10.1016/j.acra.2017.06.010

3D registration of mpMRI for assessment of prostate cancer focal therapy

Clément Orczyk 1,2,4,6, Andrew B Rosenkrantz 3, Artem Mikheev 3, Arnauld Villers 5, Myriam Bernaudin 4, Samir S Taneja 2,3, Samuel Valable 4, Henry Rusinek 3
PMCID: PMC6025844  NIHMSID: NIHMS918557  PMID: 29122471

Abstract

Purpose

To assess a novel method of 3D co-registration of prostate MRI exams performed before and after prostate cancer focal therapy.

Material and method

We developed a software platform for automatic 3D deformable coregistration of prostate MRI at different time points and applied this method to ten patients who underwent focal ablative therapy. MRI exams were performed preoperatively, as well as one week and six months posttreatment. Rigid registration served as reference for assessing coregistration accuracy and precision.

Results

Segmentation of preoperative and postoperative prostate revealed a significant post-operative volume decrease of the gland that averaged 6.49 cc (p=0.017). Applying deformable transformation based upon Mutual Information (MI) from 120 pairs of MRI slices, we refined by 2.9 mm (max 6.25mm) the alignment of the ablation zone (AZ), segmented from contrastenhanced images on the one-week post-operative exam, to the 6-month postoperative T2-weighted images. This represented a 500% improvement over the rigid approach (p=0.001), corrected by volume. The dissimilarity by Dice index of the mapped AZ using deformable transformation vs. rigid control was significantly (p=0.04) higher at the ablation site compared to the whole gland.

Conclusion

Our findings illustrate our method's ability to correct for deformation at the ablation site. The preliminary analysis suggests that deformable transformation computed from MI of preoperative and follow-up MRI is accurate in co-registration of MRI exams performed before and after focal therapy. The ability to localize the previously ablated tissue in 3D space may improve targeting for image-guided follow-up biopsy within focal therapy protocols.

Introduction

Contemporary methods of multi-parametric MRI (mpMRI) of the prostate have greatly improved the ability of radiologists and urologists to detect prostate cancer1. mpMRI allows physicians to diagnose clinically significant cancer in its early stage, to plan prostatectomy and radiation therapy, and to detect local recurrence.

Combined with the trend of earlier detection, noninvasive prostate cancer therapies are gaining interest. Focal therapies (FT) aim to combine oncologic benefit with preserved continence and erectile function. The use of this tissue preservation approach is evolving and FT is being applied to more aggressive disease than when initially proposed2,3. Clinical FT trials depend on mpMRI for tumor localization, treatment planning, and post-treatment follow-up47.

There is no consensus regarding optimal assessment of oncologic success of FT3,8,9. Current criteria of successful FT involve negative histology at the treatment site. Different methods have been proposed to detect cancer recurrence after FT. While invasive transrectal prostate biopsy or transperineal mapping biopsy are often performed, mpMRI-targeted biopsy has shown promising results10,11. Such assessment by MRI requires an ability to delineate on imaging the ablation zone (AZ) that is characterized histologically by homogeneous coagulation necrosis12,13. In addition, it has been suggested14,15, that mpMRI underestimates the total tumor volume, requiring to include some surrounding margin within the AZ for a complete focal ablation. After treatment, dynamic contrast-enhanced (DCE) MRI delineates AZ as a devascularized, non-enhancing area4. Within several weeks after treatment, the AZ shrinks, often leading to a changed configuration of the gland9,16.

These novel therapeutic developments require a reliable and accurate software system for assessment of the changes in the prostate gland, including tissue necrosis, due to ablation. To be effective, such a system must depict how the viable tissue is reorganized around the AZ. Thereby requiring a comparison of pre-treatment and post treatment images of the prostate. Development of image registration methods for this application is challenging. First, one must register longitudinal MRI, including different sequences, across different time points. Second, inherent in focal therapy, the tissue changes are inhomogeneous. Third, the variations in shape between the preoperative and postoperative exams are highly dependent on treatment delivery, location of the tumor, energy choice, as well as surrounding tissues. These factors makes it difficult to use a normative atlas to facilitate registration.

Fei et al.17 described a mutual Information based rigid-transform method to align a preoperative prostate T2 weighted (T2W) imaging sequence to an intra operative sequence. Wu et al.18 combined mutual Information measure with low-order polynomial transformation to register spectroscopy with the prostate deformed by inflated intra-rectal balloon. Using a finite elements method (FEM), Marami et al19 validated a registration approach between MRI acquired with an endorectal coil and the intraoperative MRI. Toth et al.20 also used FEM to model the changes in prostate shape after laser ablation.

It has been have previously demonstrated that the deformation of the gland after surgery is well captured by the affine transformation T that incorporates nonisotropic 3D sheer and stretch factors21. This technique was also found to accurately define a 3D target for focal therapy based on MRI findings14. We have now implemented an image-based framework for accurate estimation of the affine transform from the pre-FT to the post-FT MRI. This study evaluates the method using longitudinal mpMRI acquired before and after modern interstitial laser22 and photodynamic FT23. This study aims to assess this novel method of 3D co-registration of prostate MRI exams performed before and after prostate cancer focal therapy, in order to facilitate focal therapy follow up.

Material and Methods

Patients

Ten male patients, aged 65 +/− 6.4 years, diagnosed with localized prostate cancer at biopsy (median PSA 5.1ng/ml, median Gleason Score 6) underwent FT. Five patients were treated by interstitial laser procedure within the MRI bore4 and five by photodynamic therapy, included in an earlier publication23. Local institutional review board approved this study.

Image acquisition

All patients underwent a pre-operative mpMRI, and two follow-up post-operative mpMRI (one week and 6 months after treatment, fig.1) using 3T Magnetom Trio system equipped with a pelvic phase array (Siemens Healthcare, Erlangen, Germany). Each exam used identical MpMRI protocol that included a T2W sequence, a diffusion-weighted sequence, and a DCE-MRI exam specified in detail below.

Figure 1.

Figure 1

Timeline of treatment and imaging exams.

The anatomical T2W images through the pelvis were acquired using turbo spin-echo sequence with parameters: TR = 4950 ms, TE = 122 ms, axial orientation, 256 × 256 acquisition matrix, no interslice gap, 180 × 180 mm field of view, 3 mm slice thickness, 3 signal averages.

Diffusion weighted sequence was based on axial fat-suppressed single shot echoplanar imaging with TR=4100 ms, TE=86 ms, diffusion gradient b-values of 50 and 1000 s/mm2; slice thickness 3 mm; 100 × 100 matrix; 200 × 200 mm field of view,10 signal averages. ADC maps were reconstructed inline.

DCE-MRI exam consisted of continuous acquisition of T1-weighted 3 mm thick contiguous images (240 × 240 mm field of view; matrix 128 × 128) every 15 sec after IV administration of 0.1 mmol/kg of gadopentetate dimeglumine (Magnevist; Bayer HealthCare Pharmaceuticals, Montville, NJ). The contrast agent was administered as an intravenous bolus via power injector (Spectris; Medrad, Warrendale, Pa), followed by a 20-mL saline flush, both administered at a 3 mL/sec injection rate.

Image analysis

Our image processing workflow (figure 2) includes estimating 3D rigid body coregistration of mpMRI modalities within each exam; and image coregistration across-exams using non-rigid (affine) transform.

Figure 2.

Figure 2

Image analysis workflow.

Coregistration framework

The user interaction consists of a reduction of the field of view to the prostate gland and immediate surrounding tissues (step 2 figure 2) that can be done in few seconds. A senior urological surgeon performed this step.

There are several novel features of the system: 1) the parameters of the affine transform T are estimated only from prostate tissue, thus ignoring confounding signal from adjacent regions like the muscle, rectum or the bladder; 2) the iterative voxel-similarity algorithm is supplemented by the multi-dimensional gridding of initial parameters. The goal is to make the estimate of T insensitive of the initial value and to avoid being trapped in a suboptimal local optimum; and 3) the software is designed to be used on multi-core platforms.

Image coregistration consists of two tasks: determining the transformation T that relates points in the source image V1 with the corresponding points in the target image V2 and applying the transformation T to the source image, resulting in the coregistered volume V2’ = T(V1). Signal interpolation is another necessary step. Our coregistration process is controlled using the dialog box shown in figure 3. The optimization is done in two stages:

  1. “Autofocus” stage: exhaustive search over multiple initial approximations drawn from a discrete grid of parameters that define T (6 parameters for rigid body, 12 parameters for affine transform). The most promising candidates (those having largest similarity measure) are passed to the second, fine-tune stage. The number of selected candidates is controlled by the "power" factor P. Large values of P may improve the accuracy of coregistration at the cost of longer processing time.

  2. “Fine-tune” stage: iterative search for a local maximum of the similarity measure (initialized at P settings from autofocus stage). We refine P most promising affine transforms using the parallelized implementation of the Nelder–Mead algorithm, a method for unconstrained optimization24 The available measures include signal intensity differences25, signal correlation26, uniformity of ratio image27,28, and mutual information (MI) and normalized MI2932. Mutual Information33 (MI) was selected as the similarity metric due to its demonstrated robustness in multimodality registration, especially when applied within-subject. MI has been used successfully in registration of prostate MRI17,18. While signal characteristics of untreated and treated tissue may be different, untreated portions of the gland constitute a vast majority of tissue volume3.

Figure 3.

Figure 3

The dialogue box defines the registration process

Our framework allows the user to re strict the similarity measure to a predefined 3D region called "target". In this study the target region was the prostate and immediately (approximately 5 mm margin) surrounding tissue34. The idea is to focus the similarity on the organ of interest, while ignoring possible misalignment of background structures as well as confounding image (curves of bladder neck or anterior wall of rectum).

Estimating transformations within-exam and across exams

The parameters for coregistering different MRI sequences within each exam were: target ROI=yes, subsample=3, autofocus grid = 10mm, rotation = 10°, transform = rigid, measure = mutual information, interpolation = sinc. Coregistration of MRI sequences across exams used the similar parameters except transform = affine, scale deformation=2 and shear=5. Here a rigid method was explored as a control for affine, to assess the significance of deformation (stretching and sheering) induced by therapy and to describe local changes that take place following FT.

For each patient and each exam, the resulting transformations were saved for later recall, to be applied to landmarks or subregion masks (ROI) placed within the source volume. This allowed visualization of AZ from the 1 week post-FT MRI superimposed over the prostate 6-month post-FT.

The coregistration software was written in C++ using Microsoft Foundation Class and Intel Threading Building Blocks libraries. The program exploits parallel processing.

Error analysis and segmentation of prostate gland and ablation zone

To analyze registration error, two operators with experience in prostate anatomy manually segmented in consensus the different 3D masks (or ROIs): preoperative prostate, 6 months post operative prostate, and AZ. ROIs excluded the seminal vesicles. The first two ROIs were traced on T2W images. Segmentation of the AZ, which was visualized in all 10 cases, was derived from the latest DCE time-point from the 1-week post-FT MRI (Fig. 4B). Ground truth segmentation was done in consensus by a radiologist who completed an abdominal radiology fellowship with over 5 years’ experience in interpretation of prostate mp MRI and a senior urological surgeon with 3 years in practice. The geometrical transformations T estimated in the process of coregistration were applied to these 3D ROIs.

Figure 4.

Figure 4

Illustrative case of affine registration between pre-treatment (A) and post-treatment (photodynamic therapy) T2W volumes (C). Panel (B) shows delayed DCE image of the treated area, with ablated gland shown as non enhancing region. The bottom panel displays a postoperative T2W image overlayed with the corresponding preoperative image.

The ROIs served to assess the accuracy of rigid and non-rigid transformation models (Fig. 5). It should be noted here that a future clinical/surgical use of the system does not require fine manual segmentation of the whole prostate.

Figure 5.

Figure 5

Schematic illustration of various measures assesses in current study. A: analysis of errors in whole gland definition for rigid transform model M2 vs M2”; B: analysis of errors for affine transform model M2 vs M2’; C: analysis of errors in defining AZ (AZ2’−AZ2”) vs (M2’− M2”).

We have measured the mismatch between transformed pre-op region and the region manually segmented at follow-up, the latter considered as the ground truth. Three types of error measures were evaluated:

  1. volume changes -- while important, this measure is the least informative, as unlike the other two measures it doesn't capture subtle shape changes.

  2. the Hausdorff distance (HD), defined here as the maximum distance (in millimeters) between the structure boundaries14. The HD was obtained for each slice composing an ROI. For each multislice ROI, the average of the maximum HD for each slice was calculated resulting in an average maximum HD. The purpose is to have 3D information for each ROI.

  3. Dice index21 was defined as the volume ratio Di= 2 × (AB)/(AB). The Dice index measures the normalized similarity between two different 3D masks ROIs based on their overlap.

    The co-registration process aims to transfer the location of the effectively ablated zone AZ based on early post contrast MRI to its residual location within the late control MRI. We further analyzed how the rigid Tr(V1) and non-rigid Ta(V1) transforms computed from mutual information measure for the entire gland (M=mask of whole gland) is able to align the AZ on V2 (late post-FT), as illustrated in figure 2. This entails direct comparison of the derived target for post-FT follow-up between the compensated AZ2’=Ta(Tdce(AZ)) and non-compensated deformations AZ2”=Tr(Tdce(AZ)). We compared Di AZ2’/ AZ2” to Di M2’=Ta(M)/ M2”=Tr(M) (figure 6, C). This compares the performances of the two algorithms at the location of the AZ to those for whole gland mapping. Analogously, we compared the HD for the same ROIs, resulting of AZ2’− AZ2” and M2’− M2” (figure 7, C), normalized by volume.

Figure 6.

Figure 6

Comparison between median pre-operative and 6 months post-operative volumes of the prostate (orange bars). Comparison between median volume generated with rigid and non-rigid transforms (blue bars) shows that non-rigid trans-formation compensates better for volume loss due to focal therapy.

Figure 7.

Figure 7

Demonstration of high CPU core usage on a 12-core computer achieved during registration.

These measures were compared using the paired t-test or Wilcoxon signed rank test (for data that didn't satisfy Shapiro-Wilk test of normality). A p value less than 0.05 was used to establish significance. All tests were done using R statistical software, (version 3.0.2, Sep 2013, R foundation for Statistical Computing, Vienna, Austria).

Results

Volumetric analysis

There was a significant ~14% reduction in prostate volume (table 1, figure 6) between an average of 46.5 ml pre-FT to 40.0 ml post-FT (p=0.017, paired T-test, mean 6.50, 95% confidence interval (CI) [1.46 – 11.54]). The volume of the AZ obtained by direct segmentation was significantly correlated (R=0.738, p= 0.015) with the difference in prostate volume between the pre-FT and post-FT examinations. However, the volume of AZ was on the average 13.8 ml, approximately double the difference D in pre-FT and post-FT volumes (table 1) and statistically different from D (paired t-test, T=−2.38, p=0.04; mean diff 7.33, 95% CI [0.38 – 14.27]).

Table 1.

Distribution of prostate volumes estimated from T2W images acquired before and after ablation (late control) and distribution of volume of ablated zone (AZ).

Prostate volume from T2W images Ablated Volume (cc)
from DCE MRI
Initial volume
(cc)
Post-ablation
volume (cc)
Difference
D (cc)
median 51.64 46.73 6.70 7.88
mean 46.49 39.99 6.50 13.82
SD 23.67 20.25 7.05 13.67
min 8.42 6.80 −3.60 1.07
max 87.16 65.52 21.64 37.35

The blue bars in figure 6 illustrates the significant difference in volume between the rigid and deformable transforms of the whole prostate over the late post operative prostate at 6 months MRI, i.e.. M2’ vs M2.

Analysis of image coregistration

The 10 cases represented MRI volumes composed in total of 120 pair of slices for pre operative and late follow up T2 WI. In all cases, the mutual information algorithm converged successfully and we were able to assess both non-rigid and rigid transformation for coregistration of the pre-FT and post-FT images. The software architecture successfully exploited multi-core processor parallelism and shown by high loading on a 12-core CPU system (figure 7). A representative example is shown in figure 4.

Table 2 compares of volume between the rigid M2”, which serves as a control, and deformable M2’ transforms of the whole gland. The transforms of the pre-FT prostate to the post-FT prostate yielded a significantly lower volume (p=0.041; mean difference 2.3, 95% IC[0.1132 ; 4.4868])) using non-rigid transformation compared to the rigid approach (table 2). The difference of less than 1% of prostate volume after rigid transformation might be imputable to the interpolation errors, as rigid transformation conserve volume through.

Table 2.

Comparison of volumes between original T2 WI and their transform using rigid and deformable methods.

Transformed Volumes
Rigid Preop
Transform volume
(cc)
Deformable Preop
Transform volume
(cc)
median 50.71 48.22
mean 45.41 43.23
SD 22.81 21.17
min 7.99 7.17
max 81.02 73.67

Table 3 lists the average values of Dice index and HD for the alignment of the whole gland described in Figure 6, AB. While the alignment is better (smaller HD, larger overlap) for affine transform, the difference didn’t reach significance (p=0.10 and 0.20). These comparisons suggest a trend for higher accuracy using the non-rigid transformation.

Table 3.

Alignment between whole gland obtained by mapping from pre-operative to post-operative T2W image and whole gland traced directly on post-operative image: comparison between rigid and affine coregistrations.

Rigid registration Tr Affine registration Ta
Hausdorff distance (mm)
median 7.73 7.29
mean 8.14 6.91
max 9.46 9.98
min 5.31 4.64
SD 1.45 1.60
p value p=0.20
Dice index
mean 0.82 0.84
median 0.85 0.85
max 0.91 0.92
min 0.68 0.72
SD 0.08 0.06
p value p=0.10

Analysis of AZ

When whole gland was taken in account, the non-rigid transformation Ta provided better description of AZ than rigid transformation Tr (see table 4), reaching 1.99 mm HD (or 0.72mm/ml, p=0.0019) and Di= 0.87 (p=0.046) versus HD=3.83 mm (or 0.15mm mm/ml), and Di=0.93.

Table 4.

Compensation of the local deformation by affine algorithm: comparison between mapping accuracy of the location of the ablated zone and the whole gland, referring to measures shown in figure 6 C.

Ta(AZ) vs Tr (AZ) Ta(M) vs Tr (M)
Hausdorff distance (mm)
median 1.99 3.83
mean 2.99 3.84
max 6.25 7.05
min 1.10 1.10
SD 2.10 2.21
Normalized Hausdorff distance (mm/ml)
mean 0.72 0.15
median 0.22 0.09
max 1.09 0.55
min 0.05 0.03
sd 0.57 0.17
p value p=0.0019
Dice index
mean 0.87 0.93
median 0.87 0.92
max 0.96 0.98
min 0.59 0.88
SD 0.11 0.04
p value p=0.046

Figure 8 illustrates the changes between pre and post treatment MRI at the ablated location, with a 3D reconstruction of the prostate.

Figure 8.

Figure 8

Post-surgical changes for a representative case involving dynamic phototherapy on left lobe. A,B: 3D rendering before and post treatment. Changes in shape and volume loss are observed in the left part of the gland. The pre-treatment view shows in red the lesion 10 mm in axial diameter, Gleason 6 (3+3). The post-treatment view displays in yellow the location of the ablated zone. This yellow area needs to be sampled to rule out cancer at follow-up biopsy. The green line segment is the needle path for transperineal targeted biopsy. C: preoperative T2W image. D: preoperative ADC map. E: preoperative DCE image through the cancer focus (white arrow). F: late postoperative T2W image. G, post operative ADC map H: DCE image at the same level. Changes in shape and MRI signal are discernible at the site of ablation on the left side of the gland.

Discussion

The role of image registration in prostate cancer pathway

Image coregistration plays an increasingly important role in prostate cancer. It permits us to characterize MR signal and image texture of cancer tissue through histological validation21,35,36. There is a great interest in developing ultrasound biopsy fused to MRI3740. Image registration will also play an important role in both planning and follow-up of FT. This entails accurate mapping of lesion mask derived from pre-treatment mpMRI to the space of treatment and post treatment images14.

The ability of contrast enhanced imaging, either ultrasound or MRI to visualize necrotic tissue permits initial assessment of FT41. Several studies3,8,9 converge by defining oncologic success of FT as negative biopsy at the treated area. (PSA is not helpful for monitoring FT outcome42). Histologic post FT assessment depends on either random transrectal or transperineal approach16,43. Transrectal option is prone to substantial sampling error and a high rate of false negative results. Transperineal mapping option requires repeat general anesthesia44. mpMRI offers the promise to guide post-FT biopsy and overcome these limitations42,43,45,46. However there are obvious concerns related to tissue displacement47.

A critical step is to accurately locate AZ at follow-up biopsy to (a) evaluate the energy deposition within AZ, and/or (b) sample the surrounding tissue (tumor margin). The objective is to detect and manage treatment failure or cancer recurrence and possibly offer re-treatment. This task requires detecting low-volume cancer42 and it requires exquisite precision. Ven et al.48 estimated that, given a 0.3 ml target, a precision of 1.9 mm is necessary to correctly grade 95% of aggressive tumor component in peripheral zone. The report of the START consortium concludes that defining the target for biopsy and being able to reliably sample such area remain fundamental problems [3]. The challenge is intensified if a lesion is poorly demarcated on the post-FT images or it there are significant spatial deformations between pre- and post-FT images. To address this need, our study estimated the margin of error in AZ using affine transform and a novel coregistration framework. We chose rigid registration as a control.

Challenge for image registration

The current standard in radiologic in oncology are RECIST criteria, that unfortunately are subjective and don’t involve image registration. There is very limited literature on longitudinal registration describing the deformation of the gland after local treatment16,46. A recent report20 aims to quantify changes of the gland after focal laser ablation using the finite elements method (FEM) align pre- and post-operative T2W images. The study notes the importance of knowing biomechanical properties of the tissue, including surrounding bladder and rectum.

Post-treatment volume loss

We have observed a mean decrease in gland volume of 6.50 cc or 12.9%. This is significantly lower than the volume of the AZ, although the two measures were significantly correlated. Toth et al.20 reported a similar decrease in gland volume at the same follow-up time delay in response to laser ablation. Volume shrinkage is likely due to the process of cicatrization with fibrosis49. If confirmed, accounting for volume change will be an important requirement of any longitudinal analysis software. Clearly, volume-preserving rigid body coregistration is not capable to reflect volume loss, whereas the affine transform appears to correctly represent the volume loss due to FT.

Coregistration accuracy

Our image coregistration technique helps to assess FT and demonstrates that local treatment influences the deformation of the entire gland. We have observed the similarity of boundary changes at the gland (global) and the AZ (local) level. Both Dice Index and HD show the effect of non-rigid algorithm at AZ. The change in mean HD of 2.9 mm (maximum ~6 mm) between rigid and a non-rigid mapped AZ indicates the advantage of the deformable model to define an area of interest. This observation is important because it implies that currently available systems that ignore shrinkage may leave unsampled residual tissue and fail to detect residual/recurrent disease.

We have also demonstrated that changes in AZ are well modeled by the affine transform. Normalized HD resulting from affine compensation was 0.75 mm/cc for the AZ, which is almost five times better than 0.15 mm/cc for the whole gland. The lower Dice index at the AZ location (0.88) in this experiment compared to the whole gland (0.93) indicates the higher dissimilarity of the rigid and non-rigid transforms at this very zone of interest. These data indicate that the residual tissue at the former AZ location is more accurately mapped in the post-FT MRI using the non-rigid approach than without such compensation. This important finding shows the ability to successfully model tissue changes at the location of cancer that can be visualized on baseline mpMRI. Intensity changes at the location of the ablation were also reported by Toth et al.20.

We attribute good performance of longitudinal coregistration (all the attempted registrations were successful) to the use of discrete parameter gridding, introduced to avoid being trapped in local maxima. Moreover, our method computes the similarity measures from prostate alone. The reduced field of view decreases the computational effort and is not influenced by tissue motion outside the prostate. Mutual Information has been used in several applications for prostate registration like histology-MRI correlation21,50, intra procedural registration of MRI for focal ablation.17,51. The computation of the joint histogram for MI, as a fully image based method, seems to enable the registration. Longitudinal registration of medical imaging is still an area of active research53. The implementation of multi-core parallelism enables one to complete this complex task on standard desktop computer in a few minutes.

Limitations

We have evaluated the registration technique using volumetric and linear metrics (Dice index and HD) rather than using more conventional landmark approach. Clearly identifiable landmarks are hard to detect on post-operative images. Assessment of the method in a larger cohort would be useful for validation of those initial findings. Our coregistration procedure includes manual steps in which the operator delineates the prostate gland and surrounding (approximately 5 mm) tissue. In a future study we plan to investigate (a) the relationship between the size of the mask and registration accuracy, and (b) inter-observer variability of the method.

Clinical implications

This work suggests that longitudinal image transformation may guide the location of targeted biopsy after FT. The shrinkage of AZ can be modeled prior to follow-up biopsy and incorporated in a US-guided sampling system54. A recent study evocated the benefit of a TRUS-MRI fusion platform that corrects for deformation on ultrasound due to the probe insertion, as compared to "cognitive registration"55. Such implementation could also be used for in MR bore biopsy procedure56. Using longitudinal coregistration, one could consistently re-visit the same gland location57, without limitations of implantable/imageable pellets proposed recently by Ghai et Tranchtenberg58. Recently, Natarajan et al.59 rose the question of assessment of treatment margin in their report of a phase 1 trial about focal therapy using in bore laser ablation with a transrectal approach. Our method may assist to discriminate infield/ outfield recurrence after focal therapy. Figure 9 summarizes the potential clinical implementation of our findings in focal therapy pathway and follow up.

Figure 9.

Figure 9

graphical summary of implementation of 3D registration of mpMRI into focal therapy of prostate cancer pathway. Overlays of the prostate segmentation are presented on the extreme right MRI image with the green line as the post ablation segmentation, the blue the preoperative registered prostate using the non-rigid transformation and the orange using the rigid registration.

Toth and associates20 provide preliminary validation of a competing framework based on FEM and requiring modeling the elastic effects of the bladder and the rectum. A direct comparison between FEM and purely image-based framework would be of interest. While further work is needed to validate software for accurate and safe focal therapy procedures, our preliminary experience suggests the clinical utility of affine algorithms for mapping mpMRI findings between pre- and post-FT scans. Our workflow could be also extended to transformation models that involve higher degree of freedom. The longitudinal coregistration technique could also be applied to other image-guided procedures like liver ablation60 or focal kidney-sparing cancer therapy61.

In summary, we have proposed a novel coregistration framework that has potential to provide image-guided target for post-FT biopsy. The affine algorithm can compensate and correct the deformation of an ablated zone and reach the needed accuracy of several millimeters. The technique offers the possibility to re-visit cancer location which was targeted and to plan follow up biopsy, facilitating accurate and safe follow up of focal therapy of prostate cancer.

Acknowledgments

Funding: Supported by the Joseph and Diane Steinberg Charitable Trust and Grant 1UL1RR029893 from the National Center for Research Resources, National Institutes of Health

Footnotes

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References

  • 1.Dickinson L, Ahmed HU, Allen C, et al. Magnetic resonance imaging for the detection, localisation, and characterisation of prostate cancer: recommendations from a European consensus meeting. Eur. Urol. 2011;59(4):477–494. doi: 10.1016/j.eururo.2010.12.009. [DOI] [PubMed] [Google Scholar]
  • 2.Orczyk Ca, Emberton Ma, Ahmed HUa. What tumours should we treat with focal therapy based on risk category, grade, size and location? Current Opinion in Urology. 2015;25(3):212–219. doi: 10.1097/MOU.0000000000000170. [DOI] [PubMed] [Google Scholar]
  • 3.Donaldson IA, Alonzi R, Barratt D, et al. Focal Therapy: Patients, Interventions, and Outcomes—A Report from a Consensus Meeting. European Urology. 2015;67(4):771–777. doi: 10.1016/j.eururo.2014.09.018. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 4.Oto A, Sethi I, Karczmar G, et al. MR Imaging–guided Focal Laser Ablation for Prostate Cancer: Phase I Trial. Radiology. 2013;267(3):932–940. doi: 10.1148/radiol.13121652. [DOI] [PubMed] [Google Scholar]
  • 5.van den Bos W, Muller BG, Ahmed H, et al. Focal Therapy in Prostate Cancer: International Multidisciplinary Consensus on Trial Design. European Urology. 2014;65(6):1078–1083. doi: 10.1016/j.eururo.2014.01.001. [DOI] [PubMed] [Google Scholar]
  • 6.Le Nobin J, Orczyk C, Deng F-M, et al. Prostate tumour volumes: evaluation of the agreement between magnetic resonance imaging and histology using novel co-registration software: Prostate tumour volume: co-registration between MRI and pathology. BJU International. 2014;114(6b):E105–E112. doi: 10.1111/bju.12750. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 7.Le Nobin J, Rosenkrantz AB, Villers A, et al. Image Guided Focal Therapy for Magnetic Resonance Imaging Visible Prostate Cancer: Defining a 3-Dimensional Treatment Margin Based on Magnetic Resonance Imaging Histology Co-Registration Analysis. J. Urol. 2015;194(2):364–370. doi: 10.1016/j.juro.2015.02.080. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 8.van den Bos W, Muller BG, Ahmed H, et al. Focal Therapy in Prostate Cancer: International Multidisciplinary Consensus on Trial Design. European Urology. 2014;65(6):1078–1083. doi: 10.1016/j.eururo.2014.01.001. [DOI] [PubMed] [Google Scholar]
  • 9.Muller BG, van den Bos W, Brausi M, et al. Follow-up modalities in focal therapy for prostate cancer: results from a Delphi consensus project. [Accessed February 9, 2015];World Journal of Urology. 2015 doi: 10.1007/s00345-014-1475-2. Available at http://link.springer.com/10.1007/s00345-014-1475-2. [DOI] [PMC free article] [PubMed]
  • 10.Rosenkrantz AB, Taneja SS. Targeted Prostate Biopsy: Opportunities and Challenges in the Era of Multiparametric Prostate Magnetic Resonance Imaging. The Journal of Urology. 2012;188(4):1072–1073. doi: 10.1016/j.juro.2012.07.058. [DOI] [PubMed] [Google Scholar]
  • 11.Wysock JS, Rosenkrantz AB, Huang WC, et al. A Prospective, Blinded Comparison of Magnetic Resonance (MR) Imaging–Ultrasound Fusion and Visual Estimation in the Performance of MR-targeted Prostate Biopsy: The PROFUS Trial. European Urology. 2014;66(2):343–351. doi: 10.1016/j.eururo.2013.10.048. [DOI] [PubMed] [Google Scholar]
  • 12.Lindner U, Lawrentschuk N, Weersink RA, et al. Focal Laser Ablation for Prostate Cancer Followed by Radical Prostatectomy: Validation of Focal Therapy and Imaging Accuracy. European Urology. 2010;57(6):1111–1114. doi: 10.1016/j.eururo.2010.03.008. [DOI] [PubMed] [Google Scholar]
  • 13.Huang Z, Haider MA, Kraft S, et al. Magnetic resonance imaging correlated with the histopathological effect of Pd-bacteriopheophorbide (Tookad) photodynamic therapy on the normal canine prostate gland. Lasers Surg Med. 2006;38(7):672–681. doi: 10.1002/lsm.20375. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 14.Le Nobin J, Rosenkrantz AB, Villers A, et al. Image Guided Focal Therapy for Magnetic Resonance Imaging Visible Prostate Cancer: Defining a 3-Dimensional Treatment Margin Based on Magnetic Resonance Imaging Histology Co-Registration Analysis. The Journal of Urology. 2015;194(2):364–370. doi: 10.1016/j.juro.2015.02.080. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 15.Bratan F, Melodelima C, Souchon R, et al. How Accurate Is Multiparametric MR Imaging in Evaluation of Prostate Cancer Volume? Radiology. 2014:140524. doi: 10.1148/radiol.14140524. [DOI] [PubMed] [Google Scholar]
  • 16.Rouvière O, Gelet A, Crouzet S, et al. Prostate focused ultrasound focal therapy—imaging for the future. Nature Reviews Clinical Oncology. 2012;9(12):721–727. doi: 10.1038/nrclinonc.2012.136. [DOI] [PubMed] [Google Scholar]
  • 17.Fei B, Wheaton A, Lee Z, et al. Automatic MR volume registration and its evaluation for the pelvis and prostate. Phys Med Biol. 2002;47(5):823–838. doi: 10.1088/0031-9155/47/5/309. [DOI] [PubMed] [Google Scholar]
  • 18.Wu X, Dibiase SJ, Gullapalli R, et al. Deformable image registration for the use of magnetic resonance spectroscopy in prostate treatment planning. International Journal of Radiation Oncology*Biology*Physics. 2004;58(5):1577–1583. doi: 10.1016/j.ijrobp.2003.09.072. [DOI] [PubMed] [Google Scholar]
  • 19.Marami B, Sirouspour S, Ghoul S, et al. Elastic registration of prostate MR images based on estimation of deformation states. Medical Image Analysis. 2015;21(1):87–103. doi: 10.1016/j.media.2014.12.007. [DOI] [PubMed] [Google Scholar]
  • 20.Toth R, Sperling D, Madabhushi A. Quantifying Post- Laser Ablation Prostate Therapy Changes on MRI via a Domain-Specific Biomechanical Model: Preliminary Findings. PLOS ONE. 2016;11(4):e0150016. doi: 10.1371/journal.pone.0150016. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 21.Orczyk C, Rusinek H, Rosenkrantz AB, et al. Preliminary experience with a novel method of three-dimensional co-registration of prostate cancer digital histology and in vivo multiparametric MRI. Clinical Radiology. 2013;68(12):e652–e658. doi: 10.1016/j.crad.2013.07.010. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 22.Oto A, Sethi I, Karczmar G, et al. MR Imaging-guided Focal Laser Ablation for Prostate Cancer: Phase I Trial. Radiology. 2013 doi: 10.1148/radiol.13121652. [DOI] [PubMed] [Google Scholar]
  • 23.Taneja SS, Bennett J, Coleman J, et al. Final Results of a Phase I/II Multicenter Trial of WST11 (TOOKAD® Soluble) Vascular-Targeted Photodynamic Therapy (VTP) for Hemiablation of the Prostate in Men with Unilateral Low Risk Prostate Cancer Conducted in the United States. J. Urol. 2016 doi: 10.1016/j.juro.2016.05.113. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 24.Lagarias J, Reeds J, Wright M, et al. Convergence Properties of the Nelder--Mead Simplex Method in Low Dimensions. SIAM J. Optim. 1998;9(1):112–147. [Google Scholar]
  • 25.Hajnal JV, Saeed N, Oatridge A, et al. Detection of subtle brain changes using subvoxel registration and subtraction of serial MR images. J Comput Assist Tomogr. 1995;19(5):677–691. doi: 10.1097/00004728-199509000-00001. [DOI] [PubMed] [Google Scholar]
  • 26.Lemieux L, Wieshmann UC, Moran NF, et al. The detection and significance of subtle changes in mixed-signal brain lesions by serial MRI scan matching and spatial normalization. Med Image Anal. 1998;2(3):227–242. doi: 10.1016/s1361-8415(98)80021-2. [DOI] [PubMed] [Google Scholar]
  • 27.Woods RP, Grafton ST, Holmes CJ, et al. Automated image registration: I. General methods and intrasubject, intramodality validation. J Comput Assist Tomogr. 1998;22(1):139–152. doi: 10.1097/00004728-199801000-00027. [DOI] [PubMed] [Google Scholar]
  • 28.Woods RP, Grafton ST, Watson JD, et al. Automated image registration: II. Intersubject validation of linear and nonlinear models. J Comput Assist Tomogr. 1998;22(1):153–165. doi: 10.1097/00004728-199801000-00028. [DOI] [PubMed] [Google Scholar]
  • 29.Collignon A, Maes F, Delaere D, et al. Automated multi-modality image registration based on information theory. Bizais. 1995 [Google Scholar]
  • 30.Maes F, Collignon A, Vandermeulen D, et al. Multimodality image registration by maximization of mutual information. IEEE Trans Med Imaging. 1997;16(2):187–198. doi: 10.1109/42.563664. [DOI] [PubMed] [Google Scholar]
  • 31.Viola P, Wells WM. Alignment by maximization of mutual information; Fifth International Conference on Computer Vision, 1995. Proceedings; 1995. pp. 16–23. [Google Scholar]
  • 32.Wells WM, 3rd, Viola P, Atsumi H, et al. Multi-modal volume registration by maximization of mutual information. Med Image Anal. 1996;1(1):35–51. doi: 10.1016/s1361-8415(01)80004-9. [DOI] [PubMed] [Google Scholar]
  • 33.James AP, Dasarathy BV. Medical image fusion: A survey of the state of the art. Information Fusion. 2014;19:4–19. [Google Scholar]
  • 34.Park B, Mikheev A, Zaim Wadghiri Y, et al. Optimal target VOI size for accurate 4D coregistration of DCE-MRI. [Accessed April 19, 2016];2016 9788:97881P–97881P–8. Available at: http://dx.doi.org/10.1117/12.2214675. [Google Scholar]
  • 35.Gibson E, Crukley C, Gaed M, et al. Registration of prostate histology images to ex vivo MR images via strand-shaped fiducials. J Magn Reson Imaging. 2012;36(6):1402–1412. doi: 10.1002/jmri.23767. [DOI] [PubMed] [Google Scholar]
  • 36.Patel P, Chappelow J, Tomaszewski J, et al. Spatially weighted mutual information (SWMI) for registration of digitally reconstructed ex vivo whole mount histology and in vivo prostate MRI. [Accessed March 2, 2012];IEEE. 2011 :6269–6272. doi: 10.1109/IEMBS.2011.6091547. Available at: http://ieeexplore.ieee.org.ezproxy.med.nyu.edu/xpls/abs_all.jsp?arnumber=6091547&tag=1. [DOI] [PubMed]
  • 37.Hawkes DJ, Barratt D, Blackall JM, et al. Tissue deformation and shape models in image-guided interventions: a discussion paper. Medical Image Analysis. 2005;9(2):163–175. doi: 10.1016/j.media.2004.11.007. [DOI] [PubMed] [Google Scholar]
  • 38.Hu Y, Carter T, Ahmed H, et al. Modelling Prostate Motion for Data Fusion during Image-guided Interventions. [Accessed July 12, 2011];IEEE Trans Med Imaging. 2011 doi: 10.1109/TMI.2011.2158235. Available at: http://www.ncbi.nlm.nih.gov/pubmed/21632296. [DOI] [PubMed]
  • 39.Hu Y, Morgan D, Ahmed HU, et al. A statistical motion model based on biomechanical simulations for data fusion during image-guided prostate interventions. Med Image Comput Comput Assist Interv. 2008;11(Pt 1):737–744. doi: 10.1007/978-3-540-85988-8_88. [DOI] [PubMed] [Google Scholar]
  • 40.Mitra J, Kato Z, Martí R, et al. A spline-based non-linear diffeomorphism for multimodal prostate registration. Medical Image Analysis. 2012;16(6):1259–1279. doi: 10.1016/j.media.2012.04.006. [DOI] [PubMed] [Google Scholar]
  • 41.Rouvière O, Glas L, Girouin N, et al. Prostate cancer ablation with transrectal high-intensity focused ultrasound: assessment of tissue destruction with contrast-enhanced US. Radiology. 2011;259(2):583–591. doi: 10.1148/radiol.11101489. [DOI] [PubMed] [Google Scholar]
  • 42.Barret E, Harvey-Bryan K-A, Sanchez-Salas R, et al. How to diagnose and treat focal therapy failure and recurrence? Current Opinion in Urology. 2014;24(3):241–246. doi: 10.1097/MOU.0000000000000052. [DOI] [PubMed] [Google Scholar]
  • 43.Muller BG, van den Bos W, Pinto PA, et al. Imaging modalities in focal therapy: patient selection, treatment guidance, and follow-up. Current Opinion in Urology. 2014;24(3):218–224. doi: 10.1097/MOU.0000000000000041. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 44.Muller BG, Fütterer JJ, Gupta RT, et al. The role of magnetic resonance imaging (MRI) in focal therapy for prostate cancer: recommendations from a consensus panel: Role of MRI in focal therapy for prostate cancer. BJU International. 2014;113(2):218–227. doi: 10.1111/bju.12243. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 45.De Visschere PJ, De Meerleer GO, Fütterer JJ, et al. Role of MRI in follow-up after focal therapy for prostate carcinoma. AJR Am J Roentgenol. 2010;194(6):1427–1433. doi: 10.2214/AJR.10.4263. [DOI] [PubMed] [Google Scholar]
  • 46.Del Vescovo R, Pisanti F, Russo V, et al. Dynamic contrast-enhanced MR evaluation of prostate cancer before and after endorectal high-intensity focused ultrasound. Radiol Med. 2013;118(5):851–862. doi: 10.1007/s11547-012-0876-9. [DOI] [PubMed] [Google Scholar]
  • 47.De Visschere PJ, De Meerleer GO, Fütterer JJ, et al. Role of MRI in follow-up after focal therapy for prostate carcinoma. AJR Am J Roentgenol. 2010;194(6):1427–1433. doi: 10.2214/AJR.10.4263. [DOI] [PubMed] [Google Scholar]
  • 48.Ven WJM, Hulsbergen–van de Kaa CA, Hambrock T, et al. Simulated required accuracy of image registration tools for targeting high-grade cancer components with prostate biopsies. European Radiology. 2012;23(5):1401–1407. doi: 10.1007/s00330-012-2701-1. [DOI] [PubMed] [Google Scholar]
  • 49.Shah TT, Kasivisvanathan V, Jameson C, et al. Histological outcomes after focal high-intensity focused ultrasound and cryotherapy. World J Urol. 2015:1–10. doi: 10.1007/s00345-015-1561-0. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 50.Chappelow J, Madabhushi A. 2010 IEEE International Symposium on Biomedical Imaging: From Nano to Macro. IEEE; 2010. Multi-attribute combined mutual information (MACMI): An image registration framework for leveraging multiple data channels; pp. 376–379. [Google Scholar]
  • 51.Fei B, Lee Z, Boll DT, et al. Medical Image Computing and Computer-Assisted Intervention - MICCAI 2003. Springer; Berlin, Heidelberg: 2003. [Accessed March 12, 2017]. Image Registration and Fusion for Interventional MRI Guided Thermal Ablation of the Prostate Cancer; pp. 364–372. Available at: https://link.springer.com/chapter/10.1007/978-3-540-39903-2_45. [Google Scholar]
  • 52.Hu Y, Ahmed HU, Taylor Z, et al. MR to ultrasound registration for image-guided prostate interventions. Medical Image Analysis. 2010 doi: 10.1016/j.media.2010.11.003. Available at: http://linkinghub.elsevier.com/retrieve/pii/S1361841510001295. [DOI] [PubMed]
  • 53.Gerig G, Fishbaugh J, Sadeghi N. Longitudinal modeling of appearance and shape and its potential for clinical use. Medical Image Analysis. 2016;33:114–121. doi: 10.1016/j.media.2016.06.014. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 54.Mozer P, Baumann M, Chevreau G, et al. Mapping of transrectal ultrasonographic prostate biopsies: quality control and learning curve assessment by image processing. J Ultrasound Med. 2009;28(4):455–460. doi: 10.7863/jum.2009.28.4.455. [DOI] [PubMed] [Google Scholar]
  • 55.Wysock JS, Rosenkrantz AB, Huang WC, et al. A prospective, blinded comparison of magnetic resonance (MR) imaging-ultrasound fusion and visual estimation in the performance of MR-targeted prostate biopsy: the PROFUS trial. Eur. Urol. 2014;66(2):343–351. doi: 10.1016/j.eururo.2013.10.048. [DOI] [PubMed] [Google Scholar]
  • 56.Engelhard K, Kühn R, Osten A, et al. Impact of magnetic resonance imaging-guided prostate biopsy in the supine position on the detection of significant prostate cancer in an inhomogeneous patient cohort. Scand J Urol. 2016;50(2):110–115. doi: 10.3109/21681805.2015.1103782. [DOI] [PubMed] [Google Scholar]
  • 57.Ukimura O, Gross ME, de Castro Abreu AL, et al. A novel technique using three-dimensionally documented biopsy mapping allows precise re-visiting of prostate cancer foci with serial surveillance of cell cycle progression gene panel: Re-Visiting Biopsy From Known Prostate Cancer. The Prostate. 2015;75(8):863–871. doi: 10.1002/pros.22969. [DOI] [PubMed] [Google Scholar]
  • 58.Ghai S, Trachtenberg J. Prostate cancer: A consensus on trial design for focal therapy. Nat Rev Urol. 2014;11(4):190–192. doi: 10.1038/nrurol.2014.64. [DOI] [PubMed] [Google Scholar]
  • 59.Natarajan S, Raman S, Priester AM, et al. Focal Laser Ablation of Prostate Cancer: Phase I Clinical Trial. The Journal of Urology. 2016;196(1):68–75. doi: 10.1016/j.juro.2015.12.083. [DOI] [PubMed] [Google Scholar]
  • 60.Lencioni R, de Baere T, Martin RC, et al. Image-Guided Ablation of Malignant Liver Tumors: Recommendations for Clinical Validation of Novel Thermal and Non-Thermal Technologies - A Western Perspective. Liver Cancer. 2015;4(4):208–214. doi: 10.1159/000367747. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 61.Singla N, Gahan J. New technologies in tumor ablation. Curr Opin Urol. 2016;26(3):248–253. doi: 10.1097/MOU.0000000000000284. [DOI] [PubMed] [Google Scholar]

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