Table 4. Ranking of each gene (upregulated) using proposed FS methods.
ID_REF | Identifier | HC | PCC | Relief-F | SFS | SVM-RFE | CFS | RF | IG | Score |
---|---|---|---|---|---|---|---|---|---|---|
206731_at | CNKSR2 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 1 | 8 |
209243_s_at | PEG3 | 1 | 0 | 1 | 1 | 1 | 1 | 1 | 1 | 7 |
210549_s_at | CCL23 | 1 | 1 | 1 | 1 | 0 | 0 | 0 | 1 | 5 |
216108_at | LOC105373738 | 1 | 1 | 1 | 0 | 0 | 1 | 0 | 1 | 5 |
220298_s_at | SPATA6 | 1 | 1 | 1 | 1 | 1 | 0 | 1 | 1 | 7 |
212797_at | SORT1 | 0 | 1 | 0 | 1 | 0 | 0 | 1 | 1 | 4 |
207996_s_at | LDLRAD4 | 0 | 1 | 0 | 1 | 0 | 0 | 0 | 0 | 2 |
208762_at | SUMO1 | 0 | 1 | 0 | 0 | 0 | 0 | 1 | 1 | 3 |
207257_at | EPO | 1 | 1 | 0 | 1 | 0 | 1 | 0 | 1 | 5 |
202035_s_at | SFRP1 | 1 | 0 | 0 | 0 | 1 | 0 | 1 | 1 | 4 |
204672_s_at | ANKRD6 | 0 | 0 | 1 | 1 | 1 | 0 | 1 | 1 | 5 |
220994_s_at | STXBP6 | 0 | 0 | 1 | 1 | 1 | 0 | 1 | 1 | 5 |
213652_at | PCSK5 | 1 | 0 | 0 | 0 | 1 | 1 | 0 | 0 | 3 |
213994_s_at | SPON1 | 1 | 0 | 1 | 1 | 1 | 1 | 1 | 0 | 6 |
221606_s_at | HMGN5 | 0 | 0 | 1 | 1 | 1 | 1 | 1 | 0 | 5 |
203440_at | CDH2 | 1 | 0 | 1 | 1 | 0 | 1 | 0 | 1 | 5 |
207046_at | HIST2H4B | 1 | 0 | 0 | 0 | 0 | 0 | 0 | 0 | 1 |
211865_s_at | FZR1 | 0 | 1 | 1 | 1 | 0 | 1 | 0 | 1 | 5 |
215401_at | AU147698 | 1 | 0 | 1 | 0 | 1 | 1 | 0 | 1 | 5 |
213068_at | DPT | 1 | 0 | 0 | 0 | 1 | 1 | 1 | 5 | |
214117_s_at | BTD | 1 | 1 | 0 | 1 | 1 | 1 | 1 | 1 | 7 |
34187_at | AK026407 | 1 | 1 | 0 | 1 | 1 | 0 | 1 | 1 | 6 |
213611_at | AQP5 | 1 | 0 | 0 | 1 | 1 | 1 | 1 | 0 | 5 |
209465_x_at | PTN | 0 | 0 | 1 | 0 | 1 | 1 | 0 | 0 | 3 |
208606_s_at | WNT4 | 0 | 0 | 1 | 1 | 1 | 1 | 1 | 0 | 5 |
211814_s_at | CCNE2 | 0 | 0 | 1 | 1 | 1 | 1 | 1 | 0 | 5 |
208790_s_at | PTRF | 0 | 0 | 0 | 0 | 0 | 1 | 0 | 0 | 1 |
200908_s_at | RPLP2 | 1 | 1 | 1 | 1 | 1 | 0 | 1 | 1 | 7 |
219795_at | SLC6A14 | 0 | 0 | 0 | 0 | 1 | 1 | 0 | 0 | 2 |
205730_s_at | ABLIM3 | 1 | 0 | 1 | 0 | 1 | 1 | 1 | 0 | 5 |
202648_at | TCF3 | 1 | 1 | 1 | 1 | 0 | 1 | 1 | 1 | 7 |
216267_s_at | TMEM115 | 1 | 1 | 1 | 0 | 1 | 0 | 1 | 1 | 6 |
Notes.
The nine upregulated genes selected by most (≥6) of the methods are CNKSR2, PEG3, SPATA6, SPON1, BTD, AK026407 RPLP2, TCF3 and TMEM115.