Significance
Decades of research have fostered the now-prevalent assumption that noncrop habitat facilitates better pest suppression by providing shelter and food resources to the predators and parasitoids of crop pests. Based on our analysis of the largest pest-control database of its kind, noncrop habitat surrounding farm fields does affect multiple dimensions of pest control, but the actual responses of pests and enemies are highly variable across geographies and cropping systems. Because noncrop habitat often does not enhance biological control, more information about local farming contexts is needed before habitat conservation can be recommended as a viable pest-suppression strategy. Consequently, when pest control does not benefit from noncrop vegetation, farms will need to be carefully comanaged for competing conservation and production objectives.
Keywords: agroecology, biodiversity, biological control, ecosystem services, natural enemies
Abstract
The idea that noncrop habitat enhances pest control and represents a win–win opportunity to conserve biodiversity and bolster yields has emerged as an agroecological paradigm. However, while noncrop habitat in landscapes surrounding farms sometimes benefits pest predators, natural enemy responses remain heterogeneous across studies and effects on pests are inconclusive. The observed heterogeneity in species responses to noncrop habitat may be biological in origin or could result from variation in how habitat and biocontrol are measured. Here, we use a pest-control database encompassing 132 studies and 6,759 sites worldwide to model natural enemy and pest abundances, predation rates, and crop damage as a function of landscape composition. Our results showed that although landscape composition explained significant variation within studies, pest and enemy abundances, predation rates, crop damage, and yields each exhibited different responses across studies, sometimes increasing and sometimes decreasing in landscapes with more noncrop habitat but overall showing no consistent trend. Thus, models that used landscape-composition variables to predict pest-control dynamics demonstrated little potential to explain variation across studies, though prediction did improve when comparing studies with similar crop and landscape features. Overall, our work shows that surrounding noncrop habitat does not consistently improve pest management, meaning habitat conservation may bolster production in some systems and depress yields in others. Future efforts to develop tools that inform farmers when habitat conservation truly represents a win–win would benefit from increased understanding of how landscape effects are modulated by local farm management and the biology of pests and their enemies.
Ecologists increasingly consider maintaining or restoring noncrop habitat in the landscapes surrounding farm fields to be a win–win for farmers and for conservation. Beyond well-documented benefits for crop pollinators (1), surrounding noncrop habitat is also generally thought to benefit predators and parasitoids and thereby enhance biological control of crop pests. Indeed, both qualitative (e.g., refs. 2 and 3) and quantitative (e.g., refs. 4 and 5) syntheses have concluded that, on average, enemy abundance, diversity, and activity (pest consumption) increase in landscapes with more noncrop habitat. The benefits of noncrop habitat are likely multifaceted: Just as for pollinators (1), noncrop habitat can provide enemies with supplemental food resources, nesting locations, and/or overwintering sites (2, 4, 6). However, the assumption that more noncrop habitat in farming landscapes universally increases biocontrol belies significant variation among studies in how enemies respond to landscape composition (i.e., the relative proportions of crop and noncrop land-use types in the landscapes surrounding farm fields) (4, 7). Moreover, the effect of landscape composition on pests themselves remains inconclusive, as many crop pests also benefit from nearby noncrop habitat (4, 7). As a result, programs focused on improving the conservation value of farming landscapes could, in some cases, precipitate increased yield losses to crop pests (7).
The great variation among studies in pest and enemy responses, coupled with a research bias for studies in temperate systems, has also precluded our ability to use relationships derived in prior quantitative syntheses to model pest control globally. As a result, despite presumed significant contributions to agricultural production—estimated at approximately US$4.5 billion/y in avoided crop damage in the United States alone (8)—and repeated recognition in ecosystem-service frameworks (9, 10), natural biological control is rarely taken into account in landscape-level planning and environmental decision making. Existing decision-support tools and models focus on pest-control dynamics as a function of on-farm activities (11, 12). The few landscape-level models that do exist and could inform decision making require a thorough understanding of the life histories of target pests and their natural enemies (e.g., attack rates, growth rates, etc.) (13–15). At present, such models can be applied only by experts in very data-rich environments and may not be generally applicable.
Because there is no established standard for measuring either pest control or landscape composition, it is possible that the diverse responses of pests and enemies to surrounding landscape composition result from researchers measuring pests, enemies, their interactions, and the landscapes they inhabit in different ways. Alternatively, the heterogeneity in species responses could be real, resulting from shifting interactions between different species of pests and enemies with varying traits in different landscapes. Here we standardize, reanalyze, and quantitatively synthesize published and unpublished studies to (i) assess the role of surrounding noncrop habitat in providing pest-control services to farmers, and (ii) determine to what extent landscape information alone can be used to model and predict variation in pest control across systems.
First, we compiled an extensive pest-control database composed of 18,094 total observations of pest and enemy abundance, enemy activity (predation rates), crop damage, and yields across 6,759 sites in 31 countries (Fig. 1). We then used a model-averaging approach to explore to what extent surrounding forest, grassland, scrubland, annual crops, and perennial crops (i.e., landscape composition), at multiple spatial scales, could explain spatial patterns in the pest-control variables recorded in each study. From prior observations (4, 7), we predicted that landscapes with more noncrop habitat would generally increase enemy abundance and activity (pest predation) but that pest abundance, damage, and crop yield would exhibit significant variation in how they respond to noncrop habitat across studies. Nevertheless, we predicted that landscape models would be able to explain variation in independent datasets, provided that the independent dataset and the dataset from which the landscape model was constructed shared geographic, crop, and/or landscape features.
Fig. 1.
Map of study locations. We collected pest-control data from 132 studies across 6,759 sites and 31 countries. Pest-control data included abundances of dominant pests, all pests, and natural enemies (black dots; 181 responses), pest and predator activity data from crop-damage surveys, sentinel pest experiments, and exclosure experiments (cyan dots; 125 responses), and yield data (red dots; 53 responses).
Results
Pest-Control Models.
We constructed separate models (n = 359) that explored how surrounding landscape composition affected each unique pest-control variable reported in each study (hereafter referred to as unique “pest-control responses”). We report a summary of the 359 pest-control responses, focal crops, target pests, and sample sizes (Dataset S1) and include the entire biological control database (Dataset S2). Pest-control responses were made up of censuses of dominant pests, all pests, and dominant enemies (n = 76, 27, and 78 responses, respectively), exclosure and sentinel pest experiments that measured enemy activity (n = 23 and 68, respectively), crop-damage surveys that measured pest activity (n = 34), and crop-yield data (n = 53). Though 31 countries were represented, there was a strong temperate bias, with 39% of the 132 studies from Europe, 23% from North America, 14% from Central and South America, 12% from Asia, 8% from Australia and New Zealand, and 4% from Africa. Similarly, though the database encompassed many distinct crops (n = 41 crops, 38 species), the vast majority of sites were in annual (90%) versus perennial (10%) agriculture.
Overall, we found that there was significant variation among studies in the effects of different landscape variables on pest-control responses. Contrary to our first prediction, we observed no consistent effects of “natural” landscape variables (forest, grassland, scrubland; aggregate natural habitat category) or “agricultural” landscape variables (perennial crops, annual crops; aggregate crop category) on enemy and pest abundance and activity. That is, χ2 tests indicated that surrounding noncrop habitat and cropland affected pest-control variables positively and negatively in a roughly equivalent number of models (all P > 0.05; Fig. 2). Effects of natural landscape variables were often even inconsistent within studies. For example, in the majority of enemy-abundance models, enemies responded positively to one natural land-use type (e.g., forest) but negatively to another (e.g., grassland). Restricting our focus to only the most predictive land-use variable present in each model did not change these conclusions. We still found that most pest-control variables responded positively and negatively to landscape variables in a roughly equivalent number of models (SI Appendix, Fig. S1; all P > 0.05). An exception was crop yields, which tended to decline with surrounding natural land uses more often than not (χ2 = 9.8, P < 0.01). Similarly, no single spatial scale tended to be most predictive, though more pest-abundance and enemy-activity (cage experiments) responses were best predicted by models that placed greater weight on areas closer to sampling sites (SI Appendix, Fig. S2).
Fig. 2.
Landscape effects on pest-control variables. After selecting the most predictive model for each pest-control response (N = 367) and redefining land-cover variables as natural (forest, grassland, and scrubland; green bars) versus crop (annual and perennial; orange bars), we tallied the number of pest-control responses for which models had either positive (solid), negative (diagonal hashed), or mixed (horizontal) estimates of the effect of each landscape predictor. Panels represent the seven pest-control variables, including abundance (A) and activity (B and C) of natural enemies; abundance (D and E) and activity (F) of pests; and crop yields (G). χ2 tests indicated that pest-control response variables showed heterogeneous patterns of association with the extent of surrounding natural habitat and cropland—with roughly equivalent numbers of pest-control responses having models with positive and negative effects (all P > 0.05).
Model Performance.
Despite observed heterogeneity, we did find that landscape composition explained variation in pest-control responses within studies (average R2 0.14 to 0.20; Fig. 3 and SI Appendix, Table S1). The average correlation across individual studies between observed data and model predictions was significantly larger than 0, and ranged from 0.37 (all enemies) to 0.45 (sentinel pest experiments). With respect to individual datasets, correlations between model predictions and observed data were significant and positive ∼50% of the time (SI Appendix, Table S1). Interestingly, model performance varied across biogeographic realms (SI Appendix, Fig. S3). Models tended to explain more variation in pest variables (pest abundance and damage) when studies were located in the Palearctic (42% of responses; χ2 = 5.6, P = 0.02) and, to a lesser extent, in the Nearctic (28% of responses; χ2 = 3.0, P = 0.08) compared with other areas. While landscape relationships with natural enemy variables (enemy abundance and activity) did not vary geographically (all P > 0.05), more variation in yield data was explained in the Nearctic than in other areas (χ2 = 4.4, P = 0.04).
Fig. 3.
Explanatory power of landscape pest-control models. After selecting the most predictive spatial scale (Methods), model predictions were correlated with observed data. Gray dots are both Pearson correlations between model predictions and observed data and R2 values (square of Pearson’s r). Filled circles and empty circles indicate significant (P < 0.05) and nonsignificant correlations, respectively. Black dots indicate the mean correlation across all datasets between observed and predicted values. Black lines correspond to 95% confidence intervals.
To actually assess our models’ predictive power, we examined how well observations in each dataset correlated with predictions generated from the full suite of models from the other (independent) datasets. As hypothesized, field observations did not correlate with average predictions across all independent models (Fig. 4 and SI Appendix, Table S2). That is, correlations between average model predictions and field observations were not statistically distinguishable from 0, which was not surprising given such high observed variation among studies in the directionality of landscape-composition responses.
Fig. 4.
Testing landscape models. (Top) Correlating average predictions across all possible landscape models (Methods) against independent field observations resulted in low predictive power. Each gray circle is the observed correlation for one dataset (set of field observations); filled circles are significant correlations (P < 0.05). Black circles are average correlations across all tested datasets; lines are confidence intervals. (Bottom) More selective application of models to independent field observations caused correlations to be on average positive for all pest-control variables except pest damage and crop yields (asterisks indicate P < 0.05). Specifically, this panel demonstrates that predictive power was higher when a more selective subset of models was applied to the independent field observations, subject to several of the following constraints: (i) Field observations and the data from which models were constructed (model data) shared the same crop; (ii) the same land-cover variables were present in model data and field observations; (iii) landscape values in field observations were within the range of landscape values in the model data; and (iv) models explained significant variation in their own data (r > 0.25). Dominant pests, pest damage, and crop yields were subject to constraints (i) and (ii); all pests to (i), (ii), and (iii); sentinel experiments to (i), (ii), and (iv); and all enemies and cage experiments to (i), (ii), (iii), and (iv).
Using Model Subsets to Improve Predictive Power.
To improve predictive power, we used a full-factorial sensitivity analysis (Methods) to explore multiple scenarios of filtering and applying subsets of models to field observations, rather than using the average predictions generated from all landscape models (SI Appendix, Table S3). While this approach suggested several model-selection methods that improved predictive power, correlations between model predictions and field observations remained low. For example, correlations between field observations and average model predictions tended to be higher when we only used models constructed from studies that focused on the same crop as the field observations. Prediction was also enhanced when we only included models that shared the same land-cover variables as those present around the field observations or, even more stringently, when land-cover variable values associated with the field observations were within the range of values present in the model data (i.e., the landscape-composition gradients matched). By strategically selecting models from studies that better matched the field observations, we could increase correlations between average model predictions and observed pest-abundance, enemy-abundance, and enemy-activity data such that correlations were, on average, positive across all field observations (Fig. 4, Bottom and SI Appendix, Table S2). Critically, however, model predictions rarely explained significant variation among individual pest-control responses: In ∼12 and ∼5% of responses, correlations between field observations and model predictions were significantly positive and negative, respectively.
Explorations of other strategies for improving predictive power yielded mixed results (SI Appendix, Table S3). Only using models from studies in the same biogeographic realm as the field observations marginally improved predictive power for pest-damage responses but reduced predictive power for all other pest-control variables. When models and field observations shared the same biome, predictive power significantly increased for some variables (e.g., enemy activity measured in cage experiments) but decreased for others (e.g., enemy activity measured in sentinel experiments, crop yield). Similarly, predictive power sometimes increased (e.g., all pests, crop yield) and sometimes decreased (e.g., dominant pests, all enemies, sentinel experiments, cage experiments) when we only used models from studies that were located within 500 km of field observations.
Discussion
Despite heterogeneity in environmental conditions, farm management, and species assemblages, we found that every dimension of pest control, from enemy abundance to crop yields, tended to show some associations with the surrounding landscape composition. Our work thus confirms prior observations that habitat composition of the broader farmscape can modulate on-farm pest control (2–4). Interestingly, explanatory power varied geographically. For example, models from Nearctic and Palearctic realms generally explained more variation in pest abundance and activity than models from other areas. This difference may result from latitudinal variation in data quality. Fewer regional land-use maps exist in data-poor tropical areas, and informal inspection of the global land-use map suggested that land-cover classifications were often inaccurate in tropical landscapes.
Though landscape-composition variables often explained variation in pest-control responses within studies, we observed substantial variation among studies in how pests, enemies, predation rates, crop damage, and yields responded to different landscape variables. Specifically, we did not observe a consistent increase or decrease in response to surrounding noncrop habitat in any variable. Although increased biological control can cause pests to decline in landscapes with more noncrop habitat, pests too can benefit from noncrop habitat (7). This variability also pertained to enemies, despite meta-analyses showing that enemy abundance (2, 4) and activity (5) increase in landscapes with more noncrop habitat. Key to this finding is acknowledging that meta-analyses take the effect sizes reported by individual studies (often including interactions with other variables and other idiosyncrasies in analysis), not in the standardized, uniform way presented here that isolates the effect of noncrop habitat. These results contrast prior pollinator studies, which tend to report more consistently positive effects of noncrop habitat (1, 16). One explanation for this difference may be that the greater diversity of organisms involved in pest control (e.g., birds, bats, spiders, beetles, flies, etc.) may underlie their more diverse landscape responses. Even more importantly, complex, tritrophic interactions between enemies, pests, and crops may make for more context-specific dynamics than in comparatively simpler pollinator–plant systems.
Sources of Variation.
Ultimately, such context dependence in pest and enemy responses to landscape composition made it difficult to generalize effects of land use-change decisions on pest control. While we did identify some strategies that could marginally increase predictive power (e.g., by only applying models to datasets focused on the same crop), models were still only able to predict very limited amounts of variation in pest-control variables when applied to independent datasets. Surprisingly, predictive power did not even increase when we only used models that were built from studies near to (<500 km), in the same biome as, or in the same biogeographic realm as field observations. Below, we detail five possible explanations for the remarkable variation that we observed in landscape responses; the first two focus on potential problems with underlying datasets, and the latter three focus on unaccounted-for sources of variation that could be addressed in future analyses.
First, discordance between our findings and the broader pest-control literature (4) may reflect underlying publication biases. Prior reported trends may lack reproducibility because authors are incentivized to continue interrogating their data and conducting new experiments until they find significant results (17). We do not find this explanation particularly likely, however, because prior meta-analyses do report significant cross-study variation in pest responses (4).
Second, our broad quantitative synthesis may have missed key temporal dynamics that may influence landscape effects but are rarely measured in pest-control studies. Specifically, if predator and pest abundances fluctuate and respond to each other in an oscillatory system (18), then snapshot estimates of species abundances or interactions may not reflect the longer-term impact of surrounding landscape composition. For example, one study found that, near natural habitats, syrphid fly larvae suppress week-to-week population growth of aphids, contributing to lower densities at harvest, but aggregating data into annual average abundances masked landscape effects (19).
Third, pests and enemies may respond more strongly to aspects of the surrounding landscape that we did not measure, such as landscape configuration (i.e., the spatial arrangement of surrounding land-use types) or diversity (i.e., the number of surrounding land-use types present) (7, 20, 21). Still, our approach of analyzing the proportional area of different land-use types represents the most common landscape metric used in pest-control studies (4, 20).
Fourth, discordance with prior findings may be attributable to additional sources of variability tested in the original studies but not addressed by this analysis. Indeed, landscape composition by itself explained on average only 14 to 20% of the variation in pest-control variables, leaving substantial variation unaccounted-for after correlating model predictions with field observations. Landscape-composition effects could easily be present but masked by variation in local farm-management factors or local climate variables that published studies usually treat as covariates. Indeed, crop diversification, insectary plantings, and insecticide treatments all influence pest control and, in some cases, can modify landscape effects (22–24).
Finally, different pest and enemy species often respond differently to landscape variables (7). Because most of the variables we modeled were not species-specific (e.g., abundance of all possible pests), differences in the species that were modeled versus the species present in the tested datasets likely lessened the accuracy of our predictions. Indeed, while many natural enemies need noncrop habitats to complete their life cycles (6), some enemies are more dependent on cropland than they are on noncrop vegetation (7). Moreover, if pests increase in simple landscapes, then enemies may increase too, as they start to exploit this burgeoning resource.
A Path Forward.
If we hope to move toward more sustainable land and pest management, decision makers need to be informed about tradeoffs among multiple ecosystem services of their land-use decisions. For example, a variety of stakeholders interested in agricultural development are concerned with the consequences of habitat loss that accompany land-use change, including governments (25, 26), multilateral development banks (27), and corporations (28). These actors have typically been focusing on impacts of agriculture on biodiversity, carbon storage, and water, but agricultural expansion or intensification also has massive implications for ecosystem services to agriculture, like pest suppression (29, 30).
High cross-system variability impeded this initial attempt to develop simple landscape models that could deliver accurate pest-control predictions, but has also opened the door to new avenues of exploration. We suggest three promising paths forward that leverage our newly created, open-access pest-control database.
First, future efforts could increase model complexity, incorporating landscape configuration and diversity predictors as well as indicators of local farming practices. A key consideration will be choosing variables for which sufficient data exist to model pest control in data-poor environments. Fortunately, some global, wall-to-wall datasets that could be used to characterize local farming practices already exist and others are being developed. For example, the International Institute for Applied Systems Analysis has created a global crop field size dataset (31), and EarthStat maintains a global crop-composition dataset (32) that can be used to construct crop-diversity indices.
Second, models could be made more dynamic to account for temporal changes in predator and pest relationships. Many studies in our database resurveyed pests, enemies, and their interactions multiple times and averaged them throughout the growing season. Indeed, few published studies have reported relationships between landscapes and insects at multiple time intervals, despite evidence that these relationships can change both between years and during the growing season (33). As noted above, aggregate measures of pest or enemy abundance may mask important effects on pest growth or densities at harvest (19).
Third, including trait data as species-level covariates in pest-control models could help identify groups of species that react similarly to landscape variables. Traits have been used to explain variation in tropical bird community responses to land-use intensification worldwide (34), and similar approaches may help make sense of the context dependence of these results based on life history, mobility, habitat preference, and other characteristics (35). For example, specialist pests that depend on crop resources are likely to exhibit more negative associations with surrounding noncrop vegetation than generalist pests (36). Such trait-driven models may be especially important when using future predictive models to identify tradeoffs, for example, exploring when surrounding noncrop habitat would depress one pest’s abundance but likely benefit another. An alternative approach to increasing predictive power would be redefining land-use types into more functionally relevant classifications that are tailored to specific pests and/or enemies (37). For example, with sufficient natural history information, landscapes could theoretically be classified into species-specific foraging, nesting, roosting, and unused sites.
Conclusions
By compiling and systematically analyzing the largest pest-control database of its kind to date, we have demonstrated that landscape composition alone can explain variation in the abundance and activity of natural enemies and crop pests. Critically, however, we found remarkable variability in how pests and enemies respond to different landscape metrics, preventing the prediction of pest-control responses by simple empirical models constructed from independent datasets. Ultimately, these results suggest that natural habitat conservation cannot be considered a panacea. While habitat conservation is known to enhance pest control in many cropping systems globally (4), there are also areas where conservation may bolster biodiversity—even of natural enemies—but still reduce crop production by simultaneously enhancing pests. Our study thus highlights the need to examine multiple services (e.g., pest control, pollination, soil conservation) and disservices when designing or assessing policies such as Europe’s agrienvironment schemes, which incentivize habitat creation in farmland (38).
Looking forward, generalizable decision-support tools for pest control are needed to help farmers understand when habitat conservation represents a true win–win and when conservation activities will need to be carefully comanaged to reduce the risk of damaging pest outbreaks. Future efforts to develop such models could recognize and account for system-specific variability by incorporating local management factors, temporal variation, and life-history variation among species into predictive models. To this end, we envision the supporting pest-control data that we have assembled to be a living database. Through ongoing efforts to address species traits, compile data on local management practices, and develop infrastructure to continue adding new studies that focus on different crops and geographies, the reach of our approach will continue extending to novel contexts, increasing predictive power and offering remarkable opportunities to answer critical questions about the ecology of pest control.
Methods
Database Compilation.
We formed a working group of 19 pest-control experts and practitioners to compile a database of spatial pest-control observations. First, we developed a list of potential data contributors, leveraging past syntheses (2–5), literature searches, and our professional networks. Potential contributors were contacted and asked to complete a data-entry form. Studies were included if pest-control observations were obtained across at least five distinct sampling locations (mean 50 sites), all within crop fields and across a gradient of surrounding landscape composition. Authors were required to report the following information for each sampling site: spatial coordinates, crop type, farm name, and study year. For predator, parasitoid, and pest-abundance data, we also requested information on species taxonomy, sampling dates, sampling methods (pan trap, pitfall trap, sweep net, etc.), and the number and duration of censuses. We also required each author to identify each animal as a dominant (economically important) pest, secondary pest, predator, or parasitoid.
Pest activity was measured as the fraction or amount of each crop consumed, infested, or damaged. Predator activity was measured through three types of field observations. First, some researchers reported data from experiments in which pests were collected, placed in chambers, and monitored to quantify the fraction of emerging parasitoids. Second, in sentinel pest experiments, researchers placed pests in crop fields and returned later to measure the fraction that had been parasitized or consumed (e.g., ref. 39). Third, researchers used field exclosures to exclude natural enemies and quantify differences in pest abundances and/or crop damage between plants with and without natural enemies (e.g., ref. 5). Activity data were accompanied by information on the date, duration, type, and number of in-field experiments. Crop yield data were also collected if available. Data on total crop quantity or quality were supplemented with information regarding crop species, measure type (fruit weight, biomass/area, etc.), and crop quality (marketable versus total yield). Before analysis, all pest-control data were standardized to increase comparability across diverse data types (see SI Appendix for more details).
Landscape Composition.
To quantify surrounding landscape composition, we used a hierarchical approach to acquire land-cover maps that encompassed all areas within 2 km of each study site (SI Appendix). Specifically, we asked authors to submit high-resolution land-use maps of their study regions when available; otherwise, we used either regional maps or, as a last resort, a 30-m global land-cover product (40). Land-cover maps were classified into seven categories: (i) forest and tree plantations, (ii) grassland, (iii) scrubland, (iv) annual cropland, (v) perennial cropland, (vi) urban areas, and (vii) other. We then used a distance-weighting function (with multiple spatial scales) to quantify landscape composition around each study site and value each landscape sector as a function of distance to the study site (15, 39) (SI Appendix).
Model Averaging.
We modeled pest-control data as a function of landscape-composition variables, creating separate models for each pest-control response (i.e., each unique pest-control variable measured in each study). Because landscape variables were often highly collinear within studies, we first iteratively excluded individual landscape variables until variance inflation factors (VIFs) were less than 2.5, dropping the landscape variable with the highest VIF first (41). Subsequent reanalysis that included all variables, regardless of collinearity, did not indicate any systemically higher predictive power. We then used a model-averaging procedure in which the full suite of all possible landscape models (i.e., every combination of landscape predictors) was used to quantify effects of each landscape-composition variable on the pest-control responses (MuMIn package in R). Specifically, nonshrinkage variance estimates were obtained for each fixed effect, where only models that included a given fixed effect contributed to its ultimate predicted value. For each pest-control response variable, all landscape variables associated with one spatial scale were included as fixed effects. Different spatial scales were analyzed separately. Along with landscape variables, we also included sampling method, study year, and crop type as fixed effects. For datasets in which crop yields were measured at multiple times throughout the growing season, we also included “elapsed time since planting” as an additional fixed effect. In all cases, “farm identity” was included as a random effect when multiple sampling sites were situated on the same farm.
Pest-control variables were often log-, square root-, or fourth root-transformed to abide by model assumptions (normality and homoscedasticity). Transformations did not resolve normality and heteroscedasticity concerns in 47 and 63 of 367 analyses, respectively. Subsequent sensitivity analyses indicated that excluding those models did not affect any of our conclusions or systematically improve our ability to predict variation in pest-control responses in independent datasets (see below). Therefore, these models were retained.
To determine whether pest-control variables exhibited consistent responses to landscape composition, we first reclassified landscape variables into natural habitat variables (forest, grassland, or scrubland) and crop variables (annual or perennial crops). Then, because three models (one for each spatial scale) were constructed for each dataset, in this and every subsequent analysis we restricted our focus to the one spatial scale in which landscape predictors explained the most variation. Next, we tallied the number of models in which natural habitat variables or crop variables were predicted to have consistently positive, consistently negative, or mixed effects on each pest-control variable. For example, if pest abundance increased with surrounding forest cover but decreased with grassland cover, then we categorized pest abundance as exhibiting mixed responses to surrounding natural habitat. In another analysis, we isolated the land-use variable with the highest-ranked importance for each model. We then tallied the number of models for which important natural habitat variables or crop variables increased or decreased pest-control metrics. In both cases, we used χ2 tests to assess whether each pest-control variable increased or decreased in response to surrounding natural habitat or cropland.
Analysis of Model Fit.
We calculated Pearson correlation coefficients and R2 values between model predictions and observed data to assess model fit, as these metrics are directly comparable across models. We then used t tests to determine whether the average Pearson correlation coefficient (across all datasets) differed from 0. We also tested whether models explained more variation in pest-control responses in certain regions. To do so, we implemented linear mixed models that predicted correlation coefficients from a variable identifying the biogeographic realm of the study. We used likelihood ratio tests to compare models with and without the biogeographic realm predictor.
Prediction Analysis.
To quantify our models’ predictive power, we correlated the observed pest-control variable values in each of the 367 pest-control responses (“field observations,” hereafter) with the average of all predictions generated across our many landscape models, using the following procedure. First, we selected which landscape models to use. Models built from datasets (“model data,” hereafter) that shared >25% of their study sites with the field observations were excluded so that models and field observations could be considered totally independent. We also excluded models when model data had more finely resolved land-cover classes than independent field observations. Models constructed from one pest-control variable could be applied to observations of a different pest-control variable, provided that they were either both enemy variables or pest variables. Yield models were always applied to only yield data.
Once a set of candidate models was obtained for each set of independent field observations, we used the model-averaged estimates of the effects of each landscape variable to predict pest-control variable values. Predictions from each model were scaled by subtracting the mean value and dividing by the SD, and then averaged across all models. Finally, we calculated the Pearson correlation between the field observations and the multimodel-averaged predictions. Again, we used t tests to determine whether the average Pearson correlation coefficient (across all tested datasets) differed from 0.
We also conducted a sensitivity analysis to determine if there were strategies for filtering and applying subsets of models to independent field observations so as to increase predictive power. We repeated the above model-testing procedure but after choosing to only include models derived from studies that (i) focused on the same crop as the independent field observations, (ii) were in a same biome (42), (iii) were in the same biogeographic realm, (iv) were located <500 km away from the field observations, and (v) had the same landscape variable values as the values present in the field observations. Specifically, we tried only including models constructed from studies in regions with the same land-use classes as the field observations and, even more stringently, experimented with only including models when landscape variable values associated with field observations were within the range of the variable values in the model data (i.e., the landscape gradients matched). The sensitivity analysis was conducted in a full-factorial manner, whereby every combination of the five inclusion procedures was analyzed independently. Finally, independent from the full-factorial sensitivity analysis, we also experimented with excluding models that did not explain any variation in their own datasets (Pearson’s r between model predictions and observations was <0.25). For each scenario and for each tested dataset, we calculated the Pearson correlation coefficients between model predictions and testing data.
We then used linear mixed models to evaluate whether each model restriction procedure improved or diminished overall predictive power across the independent field observations. Specifically, for each class of pest-control variable, mixed models were used to relate the Pearson correlation coefficients (response) to a series of fixed effects that indicated whether each exclusion procedure outlined above had taken place (e.g., exclude models that were focused on a different crop, in a different biome, etc.). Because the same field observation datasets appeared in each exclusion scenario, “field observation dataset name” was included as a random effect. We also included a random effect of “unique scenario combination” to identify all of the studies that were subject to the same set of exclusion procedures (e.g., exclude models that were focused on a different crop but allow models to be in different biogeographic realms and biomes). Then, we used likelihood ratio tests to compare the full mixed model with models in which we iteratively removed each fixed effect (indicator variables of each exclusion procedure).
Supplementary Material
Acknowledgments
We thank the many growers, field assistants, pest-control advisors, funders, agricultural experiment stations, and researchers who provided access to study sites, technical expertise, labor, and other types of investment underlying the studies in our database. This work was supported through the National Socio-Environmental Synthesis Center (SESYNC)—National Science Foundation Award DBI-1052875 for the project “Evidence and Decision-Support Tools for Controlling Agricultural Pests with Conservation Interventions” organized by D.S.K. and R.C.-K.
Footnotes
The authors declare no conflict of interest.
This article is a PNAS Direct Submission.
See Commentary on page 8241.
This article contains supporting information online at www.pnas.org/lookup/suppl/doi:10.1073/pnas.1800042115/-/DCSupplemental.
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