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Acta Crystallographica Section E: Crystallographic Communications logoLink to Acta Crystallographica Section E: Crystallographic Communications
. 2018 Aug 14;74(Pt 9):1222–1226. doi: 10.1107/S2056989018010939

A new structural model for NiFe hydrogenases: an unsaturated analogue of a classic hydrogenase model leads to more enzyme-like Ni—Fe distance and inter­planar fold

Daniel J Harrison a, Alan J Lough b, Ulrich Fekl a,*
PMCID: PMC6127701  PMID: 30225104

The new structural NiFe hydrogenase model [Ni(L′)FeCp*(CO)][PF6] [L′ = S—C(Me)=C(Me)—S—(CH2)3—S—C(Me)=C(Me)—S] is reported.

Keywords: crystal structure, NiFe hydrogenase, enzyme model, bioinorganic, sulfur ligand

Abstract

The complex cation in the title compound, (carbonyl-1κC)(1η5-penta­methyl­cyclo­penta­dien­yl)(μ-2,3,9,10-tetra­methyl-1,4,8,11-tetra­thia­undeca-2,9-diene-1,11-diido-1κ2 S,S′′′:2κ4 S,S′,S′′,S′′′)ironnickel(FeNi) hexa­fluoro­phosphate, [FeNi(C10H15)(C11H18S4)(CO)]PF6 or [Ni(L′)FeCp*(CO)]PF6, is composed of the nickel complex fragment [Ni(L′)] coordinated as a metalloligand (using S1 and S4) to the [FeCp*(CO)]+ fragment, where (L′)2− is [S—C(Me)=C(Me)—S—(CH2)3—S—C(Me)=C(Me)—S]2− and where Cp* is cyclo-C5(Me)5 (penta­methyl­cyclo­penta­dien­yl). The ratio of hexa­fluoro­phosphate anion per complex cation is 1:1. The structure at 150 K has ortho­rhom­bic (Pbcn) symmetry. The atoms of the complex cation are located on general positions (multiplicity = 8), whereas there are two independent hexa­fluoro­phosphate anions, each located on a twofold axis (Wyckoff position 4c; multiplicity = 4). The structure of the new dimetallic cation [Ni(L′)FeCp*(CO)]+ can be described as containing a three-legged piano-stool environment for iron [Cp*Fe(CO)‘S2’] and an approximately square-planar ‘S4’ environment for Ni. The NiS2Fe diamond-shaped substructure is notably folded at the S—S hinge: the angle between the NiS2 plane and the FeS2 plane normals is 64.85 (6)°. Largely because of this fold, the nickel–iron distance is relatively short, at 2.9195 (8) Å. The structural data for the complex cation, which contains a new unsaturated ‘S4’ ligand (two C=C double bonds), provide an inter­esting comparison with the known NiFe hydrogenase models containing a saturated ‘S4’-ligand analogue having the same number of carbon atoms in the ligand backbone, namely with the structures of [Ni(L)FeCp(CO)]+ (as the PF6 salt, CH2Cl2 solvate) and [Ni(L)FeCp*(CO)]+ (as the PF6 salt), where (L)2− is [S—CH2—CH2—S—(CH2)3—S—CH2—CH2—S]2− and Cp is cyclo­penta­dienyl. The saturated analogues [Ni(L)FeCp(CO)]+ and [Ni(L)FeCp*(CO)]+ have similar Ni—Fe distances: 3.1727 (6), 3.1529 (7) Å (two independent mol­ecules in the unit cell) and 3.111 (5) Å, respectively, for the two complexes, whereas [Ni(L′)FeCp*(CO)]+ described here stands out with a much shorter Ni—Fe distance [2.9196 (8) Å]. Also, [Ni(L)FeCp(CO)]+ and [Ni(L)FeCp*(CO)]+ show inter­planar fold angles that are similar between the two: 39.56 (5), 41.99 (5) (independent mol­ecules in the unit cell) and 47.22 (9) °, respectively, whereas [Ni(L′)FeCp*(CO)]+ possesses a much more pronounced fold [64.85 (6)°]. Given that larger fold angles and shorter Ni—Fe distances are considered to be structurally closer to the enzyme, unsaturation in an ‘S4’-ligand of the type (S—C2—S—C3—S—C2—S)2− seems to increase structural resemblance to the enzyme for structural models of the type [Ni(‘S4’)FeCpR(CO)]+ (CpR = Cp or Cp*).

Chemical context  

Since the discovery and structural elucidation of nickel–iron hydrogenases, synthetic chemists have worked towards closer and closer structural models for the NiFe hydrogen-splitting active site (Lubitz et al., 2014). This active site contains two terminal sulfur donors and two bridging sulfur donors coordinated to nickel, as well as a pseudo-octa­hedal coordination sphere around iron, which is completed by cyano and carbonyl ligands (Fig. 1, left). Several closely related models of the active site have been prepared by combining an Ni(‘S4’) fragment (‘S4’ = dianionic tetra­dentate sulfur ligand) with an [FeCpR(CO)]+ fragment (CpR = Cp, C5H5 or Cp*, C5Me5), as illustrated in Fig. 1 (right) (Canaguier et al., 2010; Yang et al., 2015; Zhu et al., 2005). These complexes have an overall mono-cationic charge, consistent with formal NiII and FeII oxidations states. The first ‘S4’ ligand used in this capacity featured a saturated two–three–two carbon linker, in L 2− = [S—CH2—CH2—S—(CH2)3—S—CH2—CH2—S]2− (Fig. 2, left) (Yang et al., 2015; Zhu et al., 2005).graphic file with name e-74-01222-scheme1.jpg

Figure 1.

Figure 1

Structure of the NiFe hydrogenase active site (left) and general model of the type [Ni(‘S4’)Fe(CpR)(CO)]+ (right; ‘S4’ = synthetic tetra­sulfur donor ligand).

Figure 2.

Figure 2

‘S4’ ligands used for the structurally characterized NiFe hydrogenase models of the type [Ni(‘S4’)Fe(CpR)(CO)]+.

Here, we present a new [Ni(‘S4’)FeCpR(CO)]+ model based on an analogous but unsaturated ‘S4’ ligand, namely L2− = [S—C(Me)=C(Me)—S—(CH2)3—S—C(Me)=C(Me)—S]2− (Fig. 2, middle), and assess the structural consequences of incorporating the unsaturated ligand. For comparison, we will also discuss a literature [Ni(‘S4’)Fe(CpR)(CO)]+ complex in which the ‘S4’ ligand has a four-carbon linker in the remote portion of the backbone (L′′2−, Fig. 2, right) (Canaguier et al., 2010).

Structural commentary  

[Ni(L′)FeCp*(CO)]+ was obtained as solvent-free crystals containing the PF6 counter-ion. A drawing showing both cation and anion in this salt is shown below (see Supramol­ecular features), and the intra­molecular structural features of the cation are discussed first. The structure of [Ni(L′)FeCp*(CO)]+ is shown in Fig. 3. It contains a three-legged piano stool environment for iron and an approximately square-planar ‘S4’ environment for Ni (sum of bond angles around Ni1 = 359.83°). Selected metal–ligand distances are Ni1—S1 = 2.1616 (11), Ni1—S2 = 2.1530 (12), Ni1—S3 = 2.1507 (11), Ni1—S4 = 2.1563 (12) Å, and Fe1—S1 = 2.3309 (12), Fe1—S4 = 2.3602 (12), Fe1—C11 = 1.768 (5), Fe1—C1 = 2.080 (4), Fe1—C2 = 2.107 (4), Fe1—C3 = 2.126 (4), Fe1—C4 = 2.138 (4), Fe1—C5 = 2.098 (4) Å. The inter­metallic (Ni1—Fe1) distance is relatively short, i.e. 2.9195 (8) Å. The NiS2Fe diamond is markedly folded at the S—S hinge: the angle between the NiS2 plane and the FeS2 plane normals (dihedral angle; 180° − hinge angle) is 64.85 (6)°, and this fold largely accounts for the short nickel–iron distance.

Figure 3.

Figure 3

Displacement ellipsoid (30% probability) drawing for [Ni(L′)FeCp*(CO)]+, as observed in the structure of [Ni(L′)FeCp*(CO)][PF6]. Generated using ORTEP-3 for Windows (Farrugia, 2012).

In the following discussion, we compare the structural features obtained with the unsaturated ligand L2− with those of literature complexes using the saturated ligand L 2−. The structures of [Ni(L)FeCp(CO)]+, as the PF6 salt/ CH2Cl2 solvate (Zhu et al., 2005), and [Ni(L)FeCp*(CO)]+, as the PF6 salt (Yang et al., 2015), are known. Both saturated analogues [Ni(L)FeCp(CO)]+ and [Ni(L)FeCp*(CO)]+ show Ni—Fe distances that are similar for the two, 3.1727 (6)/3.1529 (7) Å (two independent mol­ecules in the unit cell) and 3.111 (5) Å, respectively, for the two complexes. The [Ni(L′)FeCp*(CO)]+ complex, on the other hand, has a much shorter Ni—Fe distance [2.9195 (8), see above]. Also, [Ni(L)FeCp(CO)]+ and [Ni(L)FeCp*(CO)]+ show inter­planar fold angles that are similar for the two, 39.56 (5)/41.99 (5)° (two independent mol­ecules in the unit cell) and 47.22 (9)°, respectively, while [Ni(L′)FeCp*(CO)]+ has a much larger fold angle of 64.85 (6)° (see above). The large fold angle and short Ni—Fe distance observed in the complex with the unsaturated ligand L′ match the structure of the enzymatic active site more closely than the angles/distances of the complexes containing the saturated ligand L. For eight structurally characterized enzymes, the dihedral angles range from 59 to 99° and the Ni—Fe distances range from 2.53 to 2.97 Å (one outlier being desulfovibrio fructosovorans with 46° and 3.23 Å; Zhu et al., 2005). We have thus provided evidence that unsaturation in an ‘S4’-ligand of the type (S—C2—S—C3—S—C2—S)2− can increase structural resemblance to the enzyme in models of the type [Ni(‘S4’)FeCpR(CO)]+. Structural similarity to the enzyme in models was, in alternative approaches, also favoured when additional donor atoms were incorporated into the ligand chain (such as ‘S3N2’) or where two bidentate chelate ligands were used instead of one large ‘S4’ ligand. (Zhu et al., 2005) Within the context of linear ‘S4’ ligands, an [Ni(L′′)FeCp*(CO)]+ model with four carbon atoms, instead of three, in the remote portion of the backbone (see L′′2− in Fig. 2, right) provided an Ni—Fe distance and fold angle very similar to those of the L′ analogue, of 2.9611 (8) Å and 62.48 (4)°, respectively (Canaguier et al., 2010). In terms of activity, [Ni(L′′)FeCp*(CO)]+ was shown to be active as a hydrogen-production catalyst (Canaguier et al., 2010), which suggests that the [Ni(L′)Cp*(CO)]+ complex, with the unsat­urated ‘S4’ ligand L′, might warrant deeper investigation. We conclude that the introduction of unsaturation in the ‘S4’ ligand led to a better structural model relative to the unsaturated ligand, highlighting a new variant of the classic [Ni(’S4’)FeCpR(CO)]+-type hydrogenase model.

Supra­molecular features  

The structure results from packing of discrete cations [Ni(L′)FeCp*(CO)]+ with hexa­fluoro­phosphate anions, without solvent mol­ecules and without any solvent-accessible void. The ratio of hexa­fluoro­phosphate anion per complex cation is 1:1. The atoms of the complex cation are situated on general positions (multiplicity = 8), whereas there are two independent hexa­fluoro­phosphate anions, each situated on a twofold axis (Wyckoff position 4c in Pbcn; multiplicity = 4). A picture of the packing is shown in Fig. 4 (top, 30% probability ellipsoids), along with labeling of all non-H atoms in the unit cell (bottom). There are no classical hydrogen bonds but there are C—H⋯F hydrogen bonds to hexa­fluoro­phosphate (C6—H6B⋯F4 = 2.55 Å; C15—H15B⋯F3i = 2.55 Å; C21—H21C⋯F4ii = 2.48 Å; C22—H22C⋯F1iii = 2.52 Å) and a C—H⋯O short contact (C14—H14A⋯O1 = 2.41 Å) [symmetry codes: (i) −x + 2, y, −z + Inline graphic; (ii) −x + 1, y, −z + Inline graphic; (iii) −x + Inline graphic, y + Inline graphic, z].

Figure 4.

Figure 4

Drawings for packing (top) and labeling (bottom) of all non-H atoms in [Ni(L′)FeCp*(CO)][PF6]. Generated using Mercury (Macrae et al., 2006). For the anion in the bottom part, generic atom labels without symmetry codes have been used.

Database survey  

The Cambridge Crystallographic Database (version 5.39 including updates up to February 2018; Groom et al., 2016) was surveyed. A search was performed aimed at finding Ni1Fe1 complexes that contain at least one (possibly substituted) cyclo­penta­dienyl unit, at least one carbonyl (CO) coordinated to iron, and a nickel center bonded to at least four sulfurs. The substructure that was used for the search contained a cyclo-C5 unit (any type of bond allowed), a nickel atom bonded to four sulfur atoms (any type of bond allowed), as well as an Fe–C–O unit (any type of bond for Fe—C and for C—O). Out of the six hits, RULQEV, RULQOF and RULQUL are trimetallic (instead of dimetallic) complexes (and also do not contain a cyclo­penta­dienyl but rather a saturated five-membered ring within a polycyclic structure). Since they are not very close analogues of [Ni(L′)FeCp*(CO)]+, they are not discussed further. LAZVUE (Zhu et al., 2005) contains [Ni(L)FeCp(CO)]+ (as the PF6 salt, CH2Cl2 solvate), MUDXOA (Yang et al., 2015) contains [Ni(L)FeCp*(CO)]+ (as the PF6 salt), and SUWWAJ (Canaguier et al., 2010) contains [Ni(L′′)FeCp*(CO)]+ (as the BF4 salt, CH2Cl2 solvate). These three complex cations are discussed in detail above.

Synthesis and crystallization  

The syntheses were performed in dried solvents under an inert atmosphere (nitro­gen or argon; vacuum) using standard glove-box (MBraun) and Schlenk techniques. Deuterated NMR solvents were from Cambridge Isotopes. [Cp*Fe(CO)2]2 was acquired from Alfa Aesar. All other chemicals were obtained from Sigma–Aldrich. Photolysis was performed using a 160 W mercury vapour lamp (model: Westron Mega-Ray Self-Ballasted Zoologist).

Ni(S2C2Me2)2: This precursor for the nickel part of the complex was prepared as described in the literature (Schrauzer & Mayweg, 1965).

Ni(L′): Ni(L′), i.e. Ni(S—C(Me)=C(Me)—S—(CH2)3—S—C(Me)=C(Me)—S) was prepared by alkyl­ation of Na2[Ni(S2C2Me2)2] using 1,3-di­bromo­propane. Na2[Ni(S2C2Me2)] was prepared from Ni(S2C2Me2)2 by reduction with excess sodium in THF (344 K, 18h, in sealed vessel), until the colour had changed from deep purple to brown–yellow. The subsequent alkyl­ation of [Ni(S2C2Me2)]2− using 1,3-di­bromo­propane was performed analogously to the procedure described by Schrauzer and co-workers for the closely related Ni(S—C(Ph)=C(Ph)—S—(CH2)3—S—C(Ph)=C(Ph)—S). (Zhang et al., 1992)

[Cp*Fe(CO)2(NCMe)][PF6]: This precursor for the iron part of the complex was prepared according to the general procedure for [Cp*Fe(CO)2(solvent)]+ given by Catheline & Astruc (1984), using MeCN (acetontrile) as the solvent.

[Ni(L′)FeCp*(CO/NCMe)][PF6]: Crude [Cp*Fe(CO)2(NCMe)][PF6] (210 mg, 0.48 mmol) was combined with 6 ml of aceto­nitrile and filtered through a glass filter frit. While purging with argon, the reaction was irradiated with UV–visible light (160 W, see above) for 16 h. Under an inert atmosphere, a solution of 155 mg (0.46 mmol) of Ni(L′) in ca 7 ml of di­chloro­methane was added. The reaction mixture was heated under active argon flow to 325 K for 2 h. After cooling to room temperature, the volatiles were slowly removed under vacuum. The solid was dried under vacuum and stored in the glove-box. Yield of crude product: 253 mg (75%). 1H NMR (200 MHz, 298 K, CD3CN) δ 1.60 [s, (CH3)5C5]; δ 1.91 (s, CH3—C—S); δ 1.96 (s, CH3—C—S); δ 2.31 (s, br, CH3CN—Fe); δ 2.0–3.7 [m, br, S—(CH2)3—S]. Note that the sample thus prepared showed a 1H NMR signal for metal-coordinated aceto­nitrile. The purpose of the prolonged photolysis was to remove all CO from iron, in order to selectively prepare [Ni(L′)FeCp*(NCMe)][PF6]. However, the sample obtained appeared to be a mixture of [Ni(L′)FeCp*(CO)][PF6] and [Ni(L′)FeCp*(NCMe)][PF6] and is thus referred to as [Ni(L′)FeCp*(CO/NCMe)][PF6]. Yet, crystallization from acetone yielded exclusively [Ni(L′)FeCp*(CO)][PF6], in crystalline form.

Crystallization of [Ni(L′)FeCp*(CO)][PF6]: 11 mg of [Ni(L′)FeCp*(CO/NCMe)][PF6] were dissolved in 1.5 ml of acetone and filtered through 1 cm of Celite. Through solvent vapor diffusion, by placing the loosely capped vial into a larger vessel containing diethyl ether vapour (and some liquid), crystals of [Ni(L′)FeCp*(CO)][PF6] were grown within two days at 308 K.

Refinement  

Crystal data, data collection and structure refinement details are summarized in Table 1. All H atoms were placed in calculated positions and included in the refinment in a riding-model approximation with C—H distances of 0.98 and 0.99 Å and U iso(H) = 1.2U eq(C) or 1.5U eq(Cmeth­yl).

Table 1. Experimental details.

Crystal data
Chemical formula [FeNi(C10H15)(C11H18S4)(CO)]PF6
M r 701.25
Crystal system, space group Orthorhombic, P b c n
Temperature (K) 150
a, b, c (Å) 15.4081 (3), 18.3762 (3), 19.2154 (3)
V3) 5440.69 (16)
Z 8
Radiation type Mo Kα
μ (mm−1) 1.65
Crystal size (mm) 0.20 × 0.18 × 0.12
 
Data collection
Diffractometer Nonius KappaCCD
Absorption correction Multi-scan (SORTAV; Blessing, 1995)
T min, T max 0.759, 0.850
No. of measured, independent and observed [I > 2σ(I)] reflections 38285, 6224, 3874
R int 0.079
(sin θ/λ)max−1) 0.649
 
Refinement
R[F 2 > 2σ(F 2)], wR(F 2), S 0.052, 0.148, 1.07
No. of reflections 6224
No. of parameters 335
H-atom treatment H-atom parameters constrained
Δρmax, Δρmin (e Å−3) 1.12, −0.73

Computer programs: COLLECT (Nonius, 1998), DENZO-SMN (Otwinowski & Minor, 1997), SHELXS97 and SHELXTL (Sheldrick, 2008), SHELXL2016 (Sheldrick, 2015) and PLATON (Spek, 2009).

Supplementary Material

Crystal structure: contains datablock(s) I. DOI: 10.1107/S2056989018010939/zl2735sup1.cif

e-74-01222-sup1.cif (1.2MB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S2056989018010939/zl2735Isup2.hkl

e-74-01222-Isup2.hkl (495.2KB, hkl)

CCDC reference: 1859284

Additional supporting information: crystallographic information; 3D view; checkCIF report

Acknowledgments

We thank Mitchell J. Kerr for preparing a sample of Ni(S2C2Me2)2 used in the synthesis.

supplementary crystallographic information

Crystal data

[FeNi(C10H15)(C11H18S4)(CO)]PF6 Dx = 1.712 Mg m3
Mr = 701.25 Mo Kα radiation, λ = 0.71073 Å
Orthorhombic, Pbcn Cell parameters from 38285 reflections
a = 15.4081 (3) Å θ = 2.6–27.5°
b = 18.3762 (3) Å µ = 1.65 mm1
c = 19.2154 (3) Å T = 150 K
V = 5440.69 (16) Å3 Block, green
Z = 8 0.20 × 0.18 × 0.12 mm
F(000) = 2880

Data collection

Nonius KappaCCD diffractometer 6224 independent reflections
Radiation source: fine-focus sealed tube 3874 reflections with I > 2σ(I)
Detector resolution: 9 pixels mm-1 Rint = 0.079
φ scans and ω scans with κ offsets θmax = 27.5°, θmin = 2.6°
Absorption correction: multi-scan (SORTAV; Blessing, 1995) h = −19→19
Tmin = 0.759, Tmax = 0.850 k = −23→23
38285 measured reflections l = −24→24

Refinement

Refinement on F2 0 restraints
Least-squares matrix: full Hydrogen site location: inferred from neighbouring sites
R[F2 > 2σ(F2)] = 0.052 H-atom parameters constrained
wR(F2) = 0.148 w = 1/[σ2(Fo2) + (0.0765P)2 + 2.0266P] where P = (Fo2 + 2Fc2)/3
S = 1.07 (Δ/σ)max = 0.002
6224 reflections Δρmax = 1.12 e Å3
335 parameters Δρmin = −0.73 e Å3

Special details

Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
Ni1 0.74296 (4) 0.67056 (3) 0.52192 (3) 0.02311 (16)
Fe1 0.56172 (4) 0.71009 (3) 0.49879 (3) 0.02225 (17)
S1 0.68117 (7) 0.70012 (6) 0.42497 (5) 0.0256 (3)
S2 0.79921 (7) 0.57496 (6) 0.47542 (5) 0.0281 (3)
S3 0.79344 (7) 0.64527 (6) 0.62343 (5) 0.0268 (3)
S4 0.67593 (7) 0.76476 (6) 0.56176 (5) 0.0256 (3)
O1 0.5610 (2) 0.55947 (17) 0.54595 (17) 0.0398 (8)
C1 0.4278 (3) 0.7053 (2) 0.5115 (2) 0.0248 (9)
C2 0.4585 (3) 0.7723 (2) 0.5392 (2) 0.0265 (10)
C3 0.4983 (3) 0.8115 (2) 0.4831 (2) 0.0303 (10)
C4 0.4907 (3) 0.7698 (2) 0.4222 (2) 0.0316 (10)
C5 0.4483 (3) 0.7029 (2) 0.4388 (2) 0.0276 (10)
C6 0.3751 (3) 0.6504 (2) 0.5513 (2) 0.0353 (11)
H6A 0.313257 0.661374 0.545916 0.053*
H6B 0.390791 0.652574 0.600690 0.053*
H6C 0.387078 0.601560 0.533256 0.053*
C7 0.4426 (3) 0.7979 (3) 0.6122 (2) 0.0357 (11)
H7A 0.380057 0.803763 0.619663 0.054*
H7B 0.471790 0.844604 0.619491 0.054*
H7C 0.465444 0.761895 0.645062 0.054*
C8 0.5361 (3) 0.8871 (2) 0.4870 (3) 0.0452 (13)
H8A 0.492333 0.922612 0.472476 0.068*
H8B 0.586638 0.890341 0.456183 0.068*
H8C 0.554009 0.897320 0.534968 0.068*
C9 0.5187 (4) 0.7927 (3) 0.3503 (2) 0.0456 (13)
H9A 0.475279 0.825676 0.330445 0.068*
H9B 0.524302 0.749593 0.320604 0.068*
H9C 0.574773 0.817703 0.353096 0.068*
C10 0.4183 (3) 0.6449 (3) 0.3899 (2) 0.0444 (13)
H10A 0.355519 0.649373 0.382812 0.067*
H10B 0.431411 0.596988 0.409703 0.067*
H10C 0.448205 0.650298 0.345239 0.067*
C11 0.5660 (3) 0.6194 (3) 0.5293 (2) 0.0278 (10)
C12 0.6913 (3) 0.6181 (2) 0.3746 (2) 0.0286 (10)
C13 0.7413 (3) 0.5637 (2) 0.3961 (2) 0.0304 (10)
C14 0.7606 (3) 0.4963 (2) 0.5252 (2) 0.0278 (10)
H14A 0.696377 0.496663 0.526437 0.033*
H14B 0.779375 0.450965 0.501772 0.033*
C15 0.7957 (3) 0.4971 (2) 0.5998 (2) 0.0358 (11)
H15A 0.786109 0.448644 0.620841 0.043*
H15B 0.859172 0.505579 0.598102 0.043*
C16 0.7548 (3) 0.5546 (2) 0.6466 (2) 0.0328 (11)
H16A 0.769533 0.544153 0.695734 0.039*
H16B 0.690822 0.552699 0.641829 0.039*
C17 0.7331 (3) 0.7017 (2) 0.6814 (2) 0.0292 (10)
C18 0.6833 (3) 0.7532 (2) 0.6539 (2) 0.0267 (10)
C19 0.6439 (3) 0.6191 (3) 0.3059 (2) 0.0397 (12)
H19A 0.673889 0.587331 0.272713 0.060*
H19B 0.642695 0.668917 0.287647 0.060*
H19C 0.584335 0.601759 0.312578 0.060*
C20 0.7620 (3) 0.4947 (3) 0.3569 (2) 0.0411 (12)
H20A 0.733297 0.495786 0.311395 0.062*
H20B 0.741350 0.452654 0.383458 0.062*
H20C 0.824947 0.490988 0.350310 0.062*
C21 0.7475 (3) 0.6871 (3) 0.7574 (2) 0.0378 (12)
H21A 0.737458 0.731855 0.783949 0.057*
H21B 0.807296 0.670606 0.764737 0.057*
H21C 0.707132 0.649328 0.773176 0.057*
C22 0.6369 (3) 0.8090 (3) 0.6972 (2) 0.0381 (11)
H22A 0.676793 0.828725 0.732196 0.057*
H22B 0.587285 0.786252 0.720573 0.057*
H22C 0.616285 0.848535 0.667210 0.057*
P1 1.000000 0.50751 (9) 0.750000 0.0338 (4)
P2 0.500000 0.56829 (10) 0.750000 0.0361 (4)
F1 0.9262 (3) 0.44789 (18) 0.7508 (2) 0.0895 (14)
F2 0.92696 (19) 0.56827 (15) 0.75048 (16) 0.0518 (8)
F3 0.9995 (2) 0.5074 (2) 0.83285 (14) 0.0700 (10)
F4 0.4168 (2) 0.5668 (2) 0.7027 (2) 0.0808 (11)
F5 0.5402 (3) 0.62895 (18) 0.70149 (18) 0.0727 (10)
F6 0.5418 (2) 0.50624 (17) 0.70251 (16) 0.0670 (10)

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
Ni1 0.0223 (3) 0.0268 (3) 0.0202 (3) −0.0012 (2) −0.0002 (2) −0.0010 (2)
Fe1 0.0216 (4) 0.0250 (3) 0.0201 (3) 0.0001 (3) 0.0002 (2) 0.0023 (2)
S1 0.0247 (6) 0.0316 (6) 0.0204 (5) −0.0003 (5) 0.0005 (4) 0.0000 (4)
S2 0.0229 (6) 0.0327 (6) 0.0286 (6) 0.0013 (5) 0.0008 (4) −0.0049 (4)
S3 0.0261 (6) 0.0303 (6) 0.0242 (5) −0.0011 (5) −0.0038 (4) −0.0004 (4)
S4 0.0269 (6) 0.0269 (5) 0.0231 (5) −0.0013 (5) −0.0007 (4) −0.0010 (4)
O1 0.036 (2) 0.0321 (18) 0.051 (2) −0.0015 (15) 0.0016 (16) 0.0102 (15)
C1 0.021 (2) 0.028 (2) 0.025 (2) 0.0042 (18) −0.0034 (17) 0.0000 (17)
C2 0.022 (2) 0.030 (2) 0.027 (2) 0.0050 (18) −0.0023 (18) 0.0014 (18)
C3 0.018 (2) 0.029 (2) 0.044 (3) 0.0021 (19) 0.001 (2) 0.004 (2)
C4 0.025 (3) 0.043 (3) 0.026 (2) 0.009 (2) 0.0030 (19) 0.011 (2)
C5 0.020 (2) 0.039 (3) 0.024 (2) 0.006 (2) −0.0028 (17) −0.0011 (18)
C6 0.027 (3) 0.034 (2) 0.046 (3) −0.007 (2) 0.003 (2) 0.003 (2)
C7 0.031 (3) 0.045 (3) 0.030 (2) 0.005 (2) 0.000 (2) −0.010 (2)
C8 0.028 (3) 0.028 (2) 0.079 (4) −0.006 (2) 0.007 (3) 0.010 (2)
C9 0.041 (3) 0.060 (3) 0.036 (3) 0.014 (3) 0.009 (2) 0.021 (2)
C10 0.036 (3) 0.057 (3) 0.040 (3) 0.007 (3) −0.013 (2) −0.009 (2)
C11 0.017 (2) 0.039 (3) 0.027 (2) 0.001 (2) 0.0023 (17) 0.001 (2)
C12 0.027 (3) 0.033 (2) 0.025 (2) −0.002 (2) 0.0040 (18) −0.0060 (18)
C13 0.029 (3) 0.039 (3) 0.024 (2) 0.001 (2) 0.0034 (19) −0.0076 (19)
C14 0.023 (2) 0.023 (2) 0.037 (2) 0.0006 (18) −0.0029 (19) −0.0038 (18)
C15 0.034 (3) 0.032 (2) 0.042 (3) 0.001 (2) −0.006 (2) 0.004 (2)
C16 0.037 (3) 0.031 (2) 0.031 (2) 0.000 (2) −0.003 (2) 0.0036 (19)
C17 0.029 (3) 0.035 (2) 0.023 (2) −0.008 (2) −0.0010 (19) −0.0039 (19)
C18 0.028 (3) 0.030 (2) 0.021 (2) −0.007 (2) −0.0012 (18) −0.0052 (17)
C19 0.041 (3) 0.052 (3) 0.026 (2) −0.009 (3) −0.002 (2) −0.006 (2)
C20 0.046 (3) 0.045 (3) 0.033 (2) −0.001 (2) 0.003 (2) −0.014 (2)
C21 0.044 (3) 0.045 (3) 0.025 (2) −0.003 (2) −0.005 (2) 0.002 (2)
C22 0.039 (3) 0.048 (3) 0.027 (2) 0.003 (2) −0.005 (2) −0.010 (2)
P1 0.0388 (11) 0.0305 (9) 0.0321 (9) 0.000 −0.0043 (7) 0.000
P2 0.0311 (10) 0.0423 (10) 0.0350 (9) 0.000 −0.0006 (8) 0.000
F1 0.112 (4) 0.055 (2) 0.102 (3) −0.046 (2) 0.036 (3) −0.027 (2)
F2 0.0310 (18) 0.0563 (18) 0.068 (2) 0.0122 (14) 0.0023 (14) 0.0122 (15)
F3 0.060 (2) 0.115 (3) 0.0349 (16) 0.010 (2) −0.0033 (15) 0.0145 (17)
F4 0.061 (2) 0.090 (3) 0.092 (3) −0.011 (2) −0.039 (2) 0.017 (2)
F5 0.090 (3) 0.0526 (19) 0.075 (2) −0.0221 (19) 0.016 (2) 0.0109 (17)
F6 0.089 (3) 0.061 (2) 0.0507 (18) 0.0087 (19) 0.0156 (18) −0.0130 (15)

Geometric parameters (Å, º)

Ni1—S3 2.1507 (11) C10—H10A 0.9800
Ni1—S2 2.1530 (12) C10—H10B 0.9800
Ni1—S4 2.1563 (12) C10—H10C 0.9800
Ni1—S1 2.1616 (11) C12—C13 1.328 (6)
Ni1—Fe1 2.9195 (8) C12—C19 1.510 (6)
Fe1—C11 1.768 (5) C13—C20 1.509 (6)
Fe1—C1 2.080 (4) C14—C15 1.532 (6)
Fe1—C5 2.098 (4) C14—H14A 0.9900
Fe1—C2 2.107 (4) C14—H14B 0.9900
Fe1—C3 2.126 (4) C15—C16 1.524 (6)
Fe1—C4 2.138 (4) C15—H15A 0.9900
Fe1—S1 2.3309 (12) C15—H15B 0.9900
Fe1—S4 2.3602 (12) C16—H16A 0.9900
S1—C12 1.798 (4) C16—H16B 0.9900
S2—C13 1.778 (4) C17—C18 1.329 (6)
S2—C14 1.833 (4) C17—C21 1.501 (6)
S3—C17 1.783 (5) C18—C22 1.503 (6)
S3—C16 1.825 (4) C19—H19A 0.9800
S4—C18 1.786 (4) C19—H19B 0.9800
O1—C11 1.149 (5) C19—H19C 0.9800
C1—C2 1.423 (6) C20—H20A 0.9800
C1—C5 1.432 (6) C20—H20B 0.9800
C1—C6 1.504 (6) C20—H20C 0.9800
C2—C3 1.434 (6) C21—H21A 0.9800
C2—C7 1.499 (6) C21—H21B 0.9800
C3—C4 1.404 (6) C21—H21C 0.9800
C3—C8 1.508 (6) C22—H22A 0.9800
C4—C5 1.429 (6) C22—H22B 0.9800
C4—C9 1.507 (6) C22—H22C 0.9800
C5—C10 1.493 (6) P1—F1i 1.579 (3)
C6—H6A 0.9800 P1—F1 1.579 (3)
C6—H6B 0.9800 P1—F2 1.585 (3)
C6—H6C 0.9800 P1—F2i 1.585 (3)
C7—H7A 0.9800 P1—F3 1.592 (3)
C7—H7B 0.9800 P1—F3i 1.592 (3)
C7—H7C 0.9800 P2—F4ii 1.572 (3)
C8—H8A 0.9800 P2—F4 1.572 (3)
C8—H8B 0.9800 P2—F5ii 1.580 (3)
C8—H8C 0.9800 P2—F5 1.580 (3)
C9—H9A 0.9800 P2—F6ii 1.596 (3)
C9—H9B 0.9800 P2—F6 1.596 (3)
C9—H9C 0.9800
S3—Ni1—S2 93.13 (4) H8A—C8—H8B 109.5
S3—Ni1—S4 91.41 (4) C3—C8—H8C 109.5
S2—Ni1—S4 174.38 (5) H8A—C8—H8C 109.5
S3—Ni1—S1 174.42 (5) H8B—C8—H8C 109.5
S2—Ni1—S1 91.42 (4) C4—C9—H9A 109.5
S4—Ni1—S1 83.87 (4) C4—C9—H9B 109.5
S3—Ni1—Fe1 122.53 (4) H9A—C9—H9B 109.5
S2—Ni1—Fe1 121.66 (4) C4—C9—H9C 109.5
S4—Ni1—Fe1 52.85 (3) H9A—C9—H9C 109.5
S1—Ni1—Fe1 52.04 (3) H9B—C9—H9C 109.5
C11—Fe1—C1 87.63 (18) C5—C10—H10A 109.5
C11—Fe1—C5 98.85 (18) C5—C10—H10B 109.5
C1—Fe1—C5 40.08 (15) H10A—C10—H10B 109.5
C11—Fe1—C2 114.69 (18) C5—C10—H10C 109.5
C1—Fe1—C2 39.73 (15) H10A—C10—H10C 109.5
C5—Fe1—C2 66.92 (16) H10B—C10—H10C 109.5
C11—Fe1—C3 152.97 (19) O1—C11—Fe1 173.2 (4)
C1—Fe1—C3 66.26 (16) C13—C12—C19 124.2 (4)
C5—Fe1—C3 66.07 (17) C13—C12—S1 120.9 (3)
C2—Fe1—C3 39.61 (16) C19—C12—S1 114.7 (3)
C11—Fe1—C4 137.02 (19) C12—C13—C20 126.9 (4)
C1—Fe1—C4 66.05 (16) C12—C13—S2 118.0 (3)
C5—Fe1—C4 39.42 (17) C20—C13—S2 114.8 (3)
C2—Fe1—C4 65.71 (16) C15—C14—S2 111.4 (3)
C3—Fe1—C4 38.43 (17) C15—C14—H14A 109.3
C11—Fe1—S1 95.64 (14) S2—C14—H14A 109.3
C1—Fe1—S1 148.36 (12) C15—C14—H14B 109.3
C5—Fe1—S1 108.58 (12) S2—C14—H14B 109.3
C2—Fe1—S1 149.63 (12) H14A—C14—H14B 108.0
C3—Fe1—S1 110.20 (12) C16—C15—C14 114.4 (4)
C4—Fe1—S1 91.47 (12) C16—C15—H15A 108.7
C11—Fe1—S4 101.72 (14) C14—C15—H15A 108.7
C1—Fe1—S4 134.25 (11) C16—C15—H15B 108.7
C5—Fe1—S4 158.40 (12) C14—C15—H15B 108.7
C2—Fe1—S4 98.20 (12) H15A—C15—H15B 107.6
C3—Fe1—S4 92.43 (13) C15—C16—S3 110.7 (3)
C4—Fe1—S4 121.08 (13) C15—C16—H16A 109.5
S1—Fe1—S4 75.92 (4) S3—C16—H16A 109.5
C11—Fe1—Ni1 71.28 (14) C15—C16—H16B 109.5
C1—Fe1—Ni1 157.04 (11) S3—C16—H16B 109.5
C5—Fe1—Ni1 149.87 (12) H16A—C16—H16B 108.1
C2—Fe1—Ni1 143.21 (12) C18—C17—C21 126.8 (4)
C3—Fe1—Ni1 132.80 (12) C18—C17—S3 117.8 (3)
C4—Fe1—Ni1 136.25 (12) C21—C17—S3 115.3 (3)
S1—Fe1—Ni1 46.99 (3) C17—C18—C22 122.7 (4)
S4—Fe1—Ni1 46.74 (3) C17—C18—S4 121.1 (3)
C12—S1—Ni1 102.40 (15) C22—C18—S4 116.0 (3)
C12—S1—Fe1 117.49 (15) C12—C19—H19A 109.5
Ni1—S1—Fe1 80.97 (4) C12—C19—H19B 109.5
C13—S2—C14 101.1 (2) H19A—C19—H19B 109.5
C13—S2—Ni1 104.38 (15) C12—C19—H19C 109.5
C14—S2—Ni1 107.23 (14) H19A—C19—H19C 109.5
C17—S3—C16 102.0 (2) H19B—C19—H19C 109.5
C17—S3—Ni1 104.64 (15) C13—C20—H20A 109.5
C16—S3—Ni1 107.48 (15) C13—C20—H20B 109.5
C18—S4—Ni1 103.04 (15) H20A—C20—H20B 109.5
C18—S4—Fe1 120.33 (15) C13—C20—H20C 109.5
Ni1—S4—Fe1 80.41 (4) H20A—C20—H20C 109.5
C2—C1—C5 108.6 (4) H20B—C20—H20C 109.5
C2—C1—C6 124.7 (4) C17—C21—H21A 109.5
C5—C1—C6 126.4 (4) C17—C21—H21B 109.5
C2—C1—Fe1 71.2 (2) H21A—C21—H21B 109.5
C5—C1—Fe1 70.6 (2) C17—C21—H21C 109.5
C6—C1—Fe1 128.5 (3) H21A—C21—H21C 109.5
C1—C2—C3 107.2 (4) H21B—C21—H21C 109.5
C1—C2—C7 124.5 (4) C18—C22—H22A 109.5
C3—C2—C7 128.1 (4) C18—C22—H22B 109.5
C1—C2—Fe1 69.1 (2) H22A—C22—H22B 109.5
C3—C2—Fe1 70.9 (2) C18—C22—H22C 109.5
C7—C2—Fe1 129.7 (3) H22A—C22—H22C 109.5
C4—C3—C2 108.5 (4) H22B—C22—H22C 109.5
C4—C3—C8 125.2 (4) F1i—P1—F1 92.2 (3)
C2—C3—C8 126.1 (4) F1i—P1—F2 179.1 (2)
C4—C3—Fe1 71.3 (2) F1—P1—F2 88.70 (19)
C2—C3—Fe1 69.5 (2) F1i—P1—F2i 88.70 (19)
C8—C3—Fe1 128.5 (3) F1—P1—F2i 179.11 (19)
C3—C4—C5 108.8 (4) F2—P1—F2i 90.4 (2)
C3—C4—C9 126.0 (4) F1i—P1—F3 90.73 (19)
C5—C4—C9 125.2 (4) F1—P1—F3 89.21 (19)
C3—C4—Fe1 70.3 (2) F2—P1—F3 89.51 (17)
C5—C4—Fe1 68.8 (2) F2i—P1—F3 90.56 (17)
C9—C4—Fe1 128.9 (3) F1i—P1—F3i 89.21 (19)
C4—C5—C1 107.0 (4) F1—P1—F3i 90.73 (19)
C4—C5—C10 127.9 (4) F2—P1—F3i 90.56 (17)
C1—C5—C10 124.6 (4) F2i—P1—F3i 89.51 (17)
C4—C5—Fe1 71.8 (2) F3—P1—F3i 179.9 (3)
C1—C5—Fe1 69.3 (2) F4ii—P2—F4 178.0 (3)
C10—C5—Fe1 130.4 (3) F4ii—P2—F5ii 89.5 (2)
C1—C6—H6A 109.5 F4—P2—F5ii 91.9 (2)
C1—C6—H6B 109.5 F4ii—P2—F5 91.9 (2)
H6A—C6—H6B 109.5 F4—P2—F5 89.5 (2)
C1—C6—H6C 109.5 F5ii—P2—F5 90.2 (3)
H6A—C6—H6C 109.5 F4ii—P2—F6ii 89.2 (2)
H6B—C6—H6C 109.5 F4—P2—F6ii 89.4 (2)
C2—C7—H7A 109.5 F5ii—P2—F6ii 90.47 (18)
C2—C7—H7B 109.5 F5—P2—F6ii 178.67 (19)
H7A—C7—H7B 109.5 F4ii—P2—F6 89.4 (2)
C2—C7—H7C 109.5 F4—P2—F6 89.2 (2)
H7A—C7—H7C 109.5 F5ii—P2—F6 178.66 (19)
H7B—C7—H7C 109.5 F5—P2—F6 90.47 (18)
C3—C8—H8A 109.5 F6ii—P2—F6 88.8 (3)
C3—C8—H8B 109.5
C5—C1—C2—C3 0.0 (5) C2—C1—C5—C10 −173.1 (4)
C6—C1—C2—C3 −174.6 (4) C6—C1—C5—C10 1.4 (7)
Fe1—C1—C2—C3 61.0 (3) Fe1—C1—C5—C10 125.5 (4)
C5—C1—C2—C7 174.4 (4) C2—C1—C5—Fe1 61.4 (3)
C6—C1—C2—C7 −0.2 (7) C6—C1—C5—Fe1 −124.2 (4)
Fe1—C1—C2—C7 −124.5 (4) Ni1—S1—C12—C13 −10.7 (4)
C5—C1—C2—Fe1 −61.0 (3) Fe1—S1—C12—C13 −96.8 (4)
C6—C1—C2—Fe1 124.4 (4) Ni1—S1—C12—C19 173.1 (3)
C1—C2—C3—C4 1.0 (5) Fe1—S1—C12—C19 86.9 (3)
C7—C2—C3—C4 −173.2 (4) C19—C12—C13—C20 1.5 (8)
Fe1—C2—C3—C4 60.9 (3) S1—C12—C13—C20 −174.4 (4)
C1—C2—C3—C8 176.8 (4) C19—C12—C13—S2 174.9 (3)
C7—C2—C3—C8 2.6 (8) S1—C12—C13—S2 −1.0 (5)
Fe1—C2—C3—C8 −123.3 (5) C14—S2—C13—C12 123.5 (4)
C1—C2—C3—Fe1 −59.9 (3) Ni1—S2—C13—C12 12.2 (4)
C7—C2—C3—Fe1 125.9 (5) C14—S2—C13—C20 −62.3 (4)
C2—C3—C4—C5 −1.6 (5) Ni1—S2—C13—C20 −173.6 (3)
C8—C3—C4—C5 −177.4 (4) C13—S2—C14—C15 −174.9 (3)
Fe1—C3—C4—C5 58.2 (3) Ni1—S2—C14—C15 −65.9 (3)
C2—C3—C4—C9 175.9 (4) S2—C14—C15—C16 72.5 (4)
C8—C3—C4—C9 0.1 (7) C14—C15—C16—S3 −73.0 (4)
Fe1—C3—C4—C9 −124.3 (5) C17—S3—C16—C15 177.2 (3)
C2—C3—C4—Fe1 −59.7 (3) Ni1—S3—C16—C15 67.5 (3)
C8—C3—C4—Fe1 124.4 (5) C16—S3—C17—C18 −122.3 (4)
C3—C4—C5—C1 1.6 (5) Ni1—S3—C17—C18 −10.4 (4)
C9—C4—C5—C1 −176.0 (4) C16—S3—C17—C21 60.1 (4)
Fe1—C4—C5—C1 60.7 (3) Ni1—S3—C17—C21 172.0 (3)
C3—C4—C5—C10 173.4 (4) C21—C17—C18—C22 3.9 (7)
C9—C4—C5—C10 −4.2 (7) S3—C17—C18—C22 −173.4 (3)
Fe1—C4—C5—C10 −127.5 (5) C21—C17—C18—S4 178.1 (4)
C3—C4—C5—Fe1 −59.1 (3) S3—C17—C18—S4 0.8 (5)
C9—C4—C5—Fe1 123.3 (4) Ni1—S4—C18—C17 9.1 (4)
C2—C1—C5—C4 −1.0 (5) Fe1—S4—C18—C17 95.5 (4)
C6—C1—C5—C4 173.5 (4) Ni1—S4—C18—C22 −176.3 (3)
Fe1—C1—C5—C4 −62.3 (3) Fe1—S4—C18—C22 −89.9 (3)

Symmetry codes: (i) −x+2, y, −z+3/2; (ii) −x+1, y, −z+3/2.

Funding Statement

This work was funded by Natural Sciences and Engineering Research Council of Canada grant . University of Toronto grant .

References

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Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablock(s) I. DOI: 10.1107/S2056989018010939/zl2735sup1.cif

e-74-01222-sup1.cif (1.2MB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S2056989018010939/zl2735Isup2.hkl

e-74-01222-Isup2.hkl (495.2KB, hkl)

CCDC reference: 1859284

Additional supporting information: crystallographic information; 3D view; checkCIF report


Articles from Acta Crystallographica Section E: Crystallographic Communications are provided here courtesy of International Union of Crystallography

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