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. Author manuscript; available in PMC: 2018 Oct 27.
Published in final edited form as: Int J Tuberc Lung Dis. 2011 Nov;15(11):1556–i. doi: 10.5588/ijtld.10.0679

Predictors of delayed culture conversion in patients treated for multidrug-resistant tuberculosis in Pakistan

F Qazi *, U Khan *, S Khowaja *, M Javaid , A Ahmed , N Salahuddin , H Hussain *, M C Becerra , J E Golub §, A J Khan *
PMCID: PMC6203961  NIHMSID: NIHMS992628  PMID: 22008773

Summary

Culture conversion is an interim monitoring tool for treatment of multidrug-resistant tuberculosis (MDR-TB). We evaluated the time to and predictors of culture conversion in pulmonary MDR-TB patients enrolled in the community-based MDR-TB management program at the Indus Hospital in Karachi, Pakistan. Despite strict daily directly observed therapy, monthly food incentives and patient counseling, the median time to culture conversion was 196 days (range 32–471). The cumulative probabilities of culture conversion by 2, 4, 6 and 12 months were respectively 6%, 33%, 47%, and 73%. Smoking, high smear grade at baseline and previous use of second-line drugs delayed culture conversion.

Keywords: MDR-TB, drug-resistant TB, culture conversion, Pakistan


MULTIDRUG-RESISTANT tuberculosis (MDR-TB), which is caused by strains of Mycobacterium tuberculosis resistant to both isoniazid (H, INH) and rifampin (R, RMP), requires prolonged treatment with multiple second-line anti-tuberculosis drugs that are more costly and have more side effects than those used to treat drug-susceptible TB. Culture conversion, defined as two consecutive negative sputum cultures following an initial positive culture, is an interim monitoring tool for MDR-TB treatment.1 Reducing the time to conversion is also an important infection control measure, as culture-positive patients are more likely to transmit TB.1 Although studies have evaluated factors associated with smear conversion in patients with susceptible TB,24 there are fewer data on culture conversion in patients with MDR-TB.

Pakistan has an estimated 300 000 incident susceptible TB cases and 15 000 MDR-TB cases annually.5 The practice in many TB centers in Pakistan is to perform cultures every 6 months on patients with MDR-TB, instead of monthly as recommended by the World Health Organization (WHO) guidelines.1 We sought to examine the time to and predictors of culture conversion in pulmonary MDR-TB patients enrolled in the Indus Hospital TB Control Program in Karachi, Pakistan.

METHODS

We abstracted retrospective data of MDR-TB patients treated in the Indus Hospital TB Control Program in Karachi, Pakistan, between January 2008 and June 2010. All patients received free, individualized regimens that included second-line drugs procured from the local market. Treatment adherence was monitored by trained treatment supporters and promoted through free monthly household food rations for a family of five. Personalized counseling was provided for each patient every month, and more frequently if indicated.

Research ethics committees at the Johns Hopkins School of Medicine and Interactive Research and Development approved this study protocol.

Study participants included patients enrolled with culture-confirmed pulmonary MDR-TB who had at least 1 month of follow-up recorded. Culture conversion was defined as the first of two consecutive negative sputum cultures.6 Sputum smears and cultures were performed at baseline and on monthly follow-up visits over the course of treatment. Smear microscopy was performed using Ziehl-Neelsen staining methods. All baseline culture and drug susceptibility testing were performed on liquid culture media using the BACTEC Mycobacterial Growth Indicator Tube 960 (BD Diagnostics, Sparks, MD, USA) at the Indus Hospital bio-safety level 3 laboratory (BSL-3), which completed external quality assurance testing by the WHO Supranational Reference Laboratory (SRL) network in November 2008, and at the Borstel SRL in Germany prior to that date.

Analysis

We conducted survival analysis to identify predictors of time to conversion using a Cox proportional hazards model. The final multivariate model included candidate variables that were known to be independently associated with culture conversion or those that predicted conversion at P < 0.20, using backward stepwise regression. P values and 95% confidence intervals (95%CI) were reported using a level of significance at ⩽0.05. Data were analyzed using Stata/IC 11.0 (Stata Corp, College Station, TX, USA).

RESULTS

Eighty-five patients had culture-confirmed pulmonary MDR-TB. The mean age was 29.7 (standard deviation 12.6) and 50 (59%) were females. Sputum isolates from 14 patients were resistant to INH, RMP, ethambutol (E, EMB), pyrazinamide (Z, PZA), and streptomycin (S, SM), 3 to HREZ, 9 to HRSZ, 4 to HRES, 5 to HRE, 21 to HRS, 12 to HRZ and 17 to HR. Twenty-three isolates were resistant to fluoroquinolones (FQs); one was resistant to injectables and two were resistant to other second-line agents such as ethionamide (ETH), cycloserine (CS) and para-amino salicylic acid (PAS).

The baseline regimens were as follows: 57 patients (67%) received kanamycin (KM), ofloxacin (OFX), CS, ETH, PAS, vitamin B6 (B6); 20 (24%) received KmMxfCsEthPASB6 (Mxf = moxifloxacin); 4 (5%) received KmOfxCsEthB6; 1 received KmCsEthPASB6; 2 received KmOfxEthPASB6; and 1 received KmMxfEthPASB6. All regimens included ⩾4 effective drugs based on DST results as per WHO guidelines. All patients with FQ resistance were put on a 5-drug regimen, and Mxf was included in the baseline regimen in place of OFX whenever available. The cumulative probabilities of culture conversion by month 2, 4, 6, 12 and 18 are shown in Table 1.

Table 1.

Cumulative probability of culture conversion

Month CPCC (95%CI)
2 0.06 (0.02–0.14)
4 0.33 (0.24–0.46)
6 0.47 (0.36–0.59)
12 0.73 (0.60–0.84)
18 0.78 (0.66–0.89)

CPCC = cumulative probability of culture conversion; CI = confidence interval.

The median time to culture conversion was 196 days (range 32–471). Table 2 shows the significant results of the univariate and final multivariate model for culture conversion. Current smokers had a 0.08 times greater likelihood (hazard; 95%CI 0.01–0.49, P = 0.006) of culture conversion compared to never smokers. Patients who had previously received second-line drugs had a 0.20 times greater likelihood (95%CI 0.05–0.92, P = 0.04) of culture conversion compared to those who had not. Patients whose smear grading was negative at baseline had a 6.8 times greater likelihood (95%CI 1.37–33.6, P = 0.02) of culture conversion compared to patients who had a smear grading of ‘3+’ (>9 acid-fast bacilli/high-power field).

Table 2.

Hazard ratios of culture conversion

Univariate analysis Multivariate analysis*
Categories n Hazard ratio (95%CI) P value Hazard ratio (95%CI) P value
Sex
 Male 35 Reference Reference
 Female 50 1.93 (1.05–3.54) 0.03 1.78 (0.84–3.77) 0.13
Age, years
 ≤40 71 Reference Reference
 >40 14 0.48 (0.20–1.14) 0.10 0.36 (0.11–1.15) 0.09
BMI, kg/m2
 18.5–24.9 22 Reference
 <18.5 53 0.87 (0.46–1.64) 0.67
 ≥25 4 0.75 (0.17–3.29) 0.7
Smear grading at baseline
 3+ (>9 AFB/HPF) 18 Reference Reference
 2+ (1–9 AFB/HPF) 13 1.3 (0.46–3.75) 0.62 2.09 (0.63–7.01) 0.23
 1 + (10–99 AFB/100 HPF) 42 1.09 (0.47–2.53) 0.84 0.99 (0.34–2.87) 0.99
 Scanty (1–9 AFB/100 HPF) 4 1.15 (0.23–5.64) 0.87 6.96 (0.83–58.0) 0.07
 Negative 5 5.04 (1.26–20.1) 0.02 6.8 (1.37–33.6) 0.02
Number of first-line drugs to which isolate is resistant
 5 drugs 14 Reference Reference
 4 drugs 16 1.02 (0.38–2.74) 0.97 1.35 (0.41–4.39) 0.62
 3 drugs 38 0.98 (0.42–2.31) 0.97 1.56 (0.55–4.39) 0.40
 2 drugs 17 0.75 (0.66–4.64) 0.26 2.66 (0.80–8.80) 0.11
Prior second-line drugs
 Not received 74 Reference Reference
 Received 11 0.39 (0.12–1.24) 0.11 0.20 (0.05–0.92) 0.04
Pattern of lung lesion
 Non-consolidative 64 Reference
 Consolidative 21 1.25 (0.66–2.39) 0.49
Extent of lung lesion
 Unilateral 36 Reference Reference
 Bilateral 49 0.92 (0.52–1.64) 0.79 1.00 (0.49–2.04) 0.99
Cavitation
 No cavitation 51 Reference Reference 0.29
 Cavitation 34 0.66 (0.36–1.22) 0.19 0.68 (0.34–1.38)
Diabetes
 RBS <200 mg/dl 77 Reference Reference
 RBS >200 mg/dl + symptoms 8 1.54 (0.65–3.64) 0.32 3.05 (0.97–9.60) 0.06
Smoking
 Never smoked 78 Reference Reference
 Current smoker 6 0.20 (0.05–0.83) 0.03 0.08 (0.01–0.49) 0.006
 Former Smoker 1 0.89 (0.12–6.49) 0.91 0.94 (0.10–9.02) 0.96
Fluoroquinolone resistance
 Susceptible 62 Reference Reference
 Resistant 23 0.58 (0.28–1.21) 0.14 0.47 (0.19–1.16) 0.10
Delay in treatment from diagnosis
 <3 months 41 Reference
 ≥3 months 44 0.63 (0.35–1.15) 0.13
*

Multivariate model includes categories that had P < 0.20 using the backward stepwise method and those that were known to be independently associated with culture conversion.

CI = confidence interval; BMI = body mass index; AFB = acid-fast bacilli; HPF = high-power field; RBS = random blood sugar.

DISCUSSION

The median time to culture conversion in Karachi, Pakistan (196 days) was 3–4 months longer than reported by MDR-TB programs in Latvia (60 days) and KwaZulu-Natal, South Africa (85 days),7,8 but similar to Kanpur, India,9 where a randomized control trial of high-dose INH for MDR-TB treatment found a median time to culture conversion of 6.6 months in the placebo group (only receiving second-line treatment for MDR-TB).

The delay in culture conversion in the Indus Hospital program exists despite strong social support to patients, regular psychological counseling and the use of community treatment supporters for directly observed therapy. Current smoking, high smear grade at start of treatment and previous use of second-line drugs were strong predictors of delayed time to culture conversion in our cohort.

Despite previous use of second-line drugs, there was no evidence that resistance to FQs was a factor in delayed culture conversion, potentially due to a stronger 5-drug regimen that included Mxf. More evidence is required to determine the bioavailability of local drugs and their effect on outcomes of MDR-TB management, including the time to culture conversion.

CONCLUSIONS

Despite strong programmatic management with close treatment support and monthly food incentives, the time to culture conversion for MDR-TB patients on locally procured medicines was delayed due to smoking, high smear grade at baseline and prior treatment with second-line drugs.

Acknowledgements

Indus Hospital acknowledges the support of the National TB Programme of Pakistan, including N A Baloch, the National TB Programme Manager at the time and the contributions of M Ashfaq, N Khan, N Molla, S Khan, E Khan and H Qahir from the Indus Hospital TB team in establishing the MDR-TB program. Indus Hospital is grateful for the technical support and guidance provided by S Keshavjee, A Gulobkov, E Nardell and P Zintl from Partners in Health (Boston, MA), J Saukkonen from Center for Medical Simulation (Cambridge, MA, USA), and S Siddiqi (Sparks, MD, USA). Financial support for the Indus Hospital Program was received from the Rangoonwalla Trust, Pakistan Petroleum Limited, Dubai Islamic Bank, Ghori Trust, Adamjee Foundation, and private donors. JEG was funded partially by National Institutes of Health grant AI066994.

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