Abstract
Animal cells use an unknown mechanism to control their growth and physical size. Here, using the fluorescence exclusion method, we measure cell volume for adherent cells on substrates of varying stiffness. We discover that the cell volume has a complex dependence on substrate stiffness and is positively correlated with the size of the cell adhesion to the substrate. From a mechanical force–balance condition that determines the geometry of the cell surface, we find that the observed cell volume variation can be predicted quantitatively from the distribution of active myosin through the cell cortex. To connect cell mechanical tension with cell size homeostasis, we quantified the nuclear localization of YAP/TAZ, a transcription factor involved in cell growth and proliferation. We find that the level of nuclear YAP/TAZ is positively correlated with the average cell volume. Moreover, the level of nuclear YAP/TAZ is also connected to cell tension, as measured by the amount of phosphorylated myosin. Cells with greater apical tension tend to have higher levels of nuclear YAP/TAZ and a larger cell volume. These results point to a size-sensing mechanism based on mechanical tension: the cell tension increases as the cell grows, and increasing tension feeds back biochemically to growth and proliferation control.
INTRODUCTION
What determines the physical volume of a cell? Despite the fundamental importance of this question, and decades of experimental studies on growth dynamics in mammalian cells (Killander and Zetterberg, 1965; Fox and Pardee, 1970; Yen et al., 1975; Brooks and Shields, 1985; Hola and Riley, 1987; Conlon and Raff, 2003; Godin et al., 2010; Son et al., 2012), the mechanisms behind cell volume regulation are not well understood (Ginzberg et al., 2015). It is known that different cell types from the same organism can have dramatically different volumes (Ginzberg et al., 2015), but how cells sense and control growth/division rates under different conditions is not clear. From genetic studies, several pathways have been implicated in cell volume control. The mTor signaling pathway is known to regulate cell size by stimulating anabolism and inhibiting catabolism (Schmelzle and Hall, 2000; Lloyd, 2013). Similarly, the mammalian version of the Hippo pathway and its downstream effector YAP/TAZ are important in controlling tissue and organ size and have been implicated in cell volume regulation (Dong et al., 2007; Saucedo and Edgar, 2007; Zhao et al., 2011; Yu et al., 2015). While studies have suggested that there is a cell size checkpoint within the cell cycle at transition from G1 to S, which determines the added cell volume (Ginzberg et al., 2015; Varsano et al., 2017), exactly how and what signaling pathways are connected with the size checkpoint is still unclear.
Working from a different perspective, cells are active mechanical objects that form adhesions with the extracellular matrix and balance forces in the cytoplasm with the extracellular environment (Tao et al., 2017). Mechanical properties of the microenvironment have been shown to influence cell growth– and cycle–related phenomena including differentiation (Engler et al., 2006) and may impact cell volume as well. Indeed, YAP/TAZ has been shown to be sensitive to mechanical forces and the stiffness of the environment (Dupont et al., 2011; Codelia et al., 2014; Low et al., 2014; Piccolo et al., 2014; Elosegui-Artola et al., 2016), which suggests that the mechanical state of the cell could influence cell growth and volume. In this paper, we explore how cytoskeletal tension is related to cell volume and how substrate stiffness influences cell size through the measurement of single cell volumes for several different cell types. We show that how cells distribute their tension over different regions of the cell surface can explain the observed cell volume under different conditions. Moreover, we explore how single cell tension (reported by the amount of phosphorylated myosin light chain [pMLC], similarly to previous work; Fernandez-Gonzalez and Zallen, 2009; Elliott et al., 2015) is related to YAP/TAZ nuclear localization and discover that the amount of nuclear YAP/TAZ, which is also the active form, is correlated with the amount of myosin in the apical region of the adherent cell. This is consistent with suggestions that YAP is sensitive to cytoskeletal tension (Dupont et al., 2011; Elosegui-Artola et al., 2016). The level of nuclear YAP/TAZ also increases with increasing cell volume, suggesting that as the cell grows, it increases myosin activity to maintain force balance, and the change in the myosin level can serve as a signal for YAP/TAZ activity, which influences the observed cell size.
Several methods have been used to measure cell volume (Hurley, 1970; Tzur et al., 2009; Sung et al., 2013; Cadart et al., 2017). Here we are interested in a high-throughput measurement of live cell volume for single adherent cells. We use the fluorescence exclusion method (Bottier et al., 2011; Cadart et al., 2017) to quantify cell volume. The fluorescence exclusion method was able to reveal that mitotic cells swell before cytokinesis (Son et al., 2015; Zlotek-Zlotkiewicz et al., 2015). We simultaneously measure cell volume, cell adhesion area, and cell shape factor for three different cell types on substrates varying in stiffness from 3 kPa to GPa (glass). The results show that the mean cell volume depends on the substrate stiffness, but that dependence varies across different cell types. For all cells, the measured volume is strongly correlated with cell adhesion area, but the slope of this correlation depends on the adhesion shape and the substrate stiffness. For the same adhesion area, more elongated cells have a smaller volume than more circular cells. This result can be explained by a mechanical model of the cell where cortical tension developed by myosin is proportional to the mean curvature of the cell surface. In addition, from quantitative immunofluorescence measurements, we find that the total pMLC content and the spatial distribution of pMLC can predict cell volume. Using the measured pMLC levels as inputs, our mechanical model can be used to predict cell volume across all cell types on all substrates.
Cytoskeletal tension and substrate stiffness have been shown to influence the nuclear localization of YAP/TAZ (Dupont et al., 2011; Codelia et al., 2014; Low et al., 2014; Piccolo et al., 2014; Elosegui-Artola et al., 2016), which in turn influences cell proliferation and growth (Shen and Stanger, 2015). The nuclear portion of YAP/TAZ is a cofactor with TEAD and regulates the transcription of a large group of proteins (Zhao et al., 2008). To explore how cell tension is related to YAP/TAZ nuclear localization, we performed quantitative immunofluorescence measurements. While the results show dependence on cell type, for the terminally differentiated cells tested, we observed that the average cell volume is positively correlated with the level of nuclear YAP/TAZ. But the nuclear-to-cytoplasmic ratio of YAP/TAZ is not a predictor of cell volume. The nuclear YAP/TAZ level is also positively correlated with the amount of apical pMLC, a readout of apical cell tension. In mesenchymal stem cells (MSCs), the behavior of YAP and tension is more complex, but the correlation between nuclear YAP/TAZ and apical pMLC persists. These results suggest that cell tension can potentially serve as a checkpoint signal that allows the cell to sense its volume and control the cell cycle progression in late G1.
RESULTS
Cell volume is heterogeneous and depends on substrate stiffness
To quantify cell volume in different physical and biochemical environments, we use the fluorescence exclusion method to simultaneously measure single-cell volume, adhesion area, and cell shape for three different fibroblastic cell types (Figure 1a). We compare common mouse fibroblasts (3T3) with human-isolated fibroblasts (NuFF) and mouse-isolated mesenchymal stem cells (MSC). 3T3 fibroblasts are from the standard NIH line. NuFFs are neonatal foreskin fibroblasts obtained from Global Stem (Rockville, MD) at passage 9 and used up to passage 28. MSCs were isolated from bone marrow of 6 wk–old mice. Volume measurements were performed for cells at low density and on substrates of 3-kPa PDMS, 12.6-kPa PDMS, and glass (gigapascals). We also tried 0.4-kPa PDMS substrates, but found them to be too soft to form stable microfluidic channels for volume measurement. In addition, we measured cell volume during cell cycle arrest achieved through serum starvation or treatment with aphidicolin on glass substrates. The resultant cell volume measurements displayed in Figure 1, b–e, show several striking features. 1) Individual cell volume in each condition always shows significant heterogeneity, with a high proportion of smaller cells (Figure 1b). This is in accord with previous results using a different method of measurement (Tzur et al., 2009). This heterogeneity is partly explained by the fact that cells are in different stages of the cell cycle, and cells divide symmetrically, producing two daughter cells, so that there are more young cells than old cells. The shape of the volume distributions can be roughly explained theoretically from cell aging dynamics (Stukalin et al., 2013). 2) The average cell volume varies significantly across cell types, the largest line tested being the MSCs. The average cell volume also depends on the substrate stiffness. In particular, the 12.6-kPa substrate always shows a significant deviation, indicating unusual behavior at intermediate stiffness. For 3T3s and MSCs, the average cell volume at 12.6 kPa is 32 and 50% higher than on 3 kPa and glass, respectively. For NuFFs, it is 40 and 15% less than on glass and 3 kPa, respectively (Figure 1, c–e). The sharp variation around intermediate stiffness is surprising, but parallels previous work that showed a similar change in cell adhesion shape (Rehfeldt et al., 2012) and traction force (Han et al., 2012) at intermediate stiffness. The overall trend of these results is in agreement with results previously published (Wang et al., 2018) on the MCF7 cell line, and is somewhat different from confocal microscopy results for cells on polyacrylamide gels (Guo et al., 2017), presumably due to the difference in substrate material and coating. 3) Cell cycle arrest using serum starvation and aphidicolin produced significant changes in average cell volume as well (Figure 1, c–e). Cells after serum starvation can be smaller, while aphidicolin-treated cells can be significantly larger. Aphidicolin inhibits DNA polymerase and arrests cells in late G1 and early S (Krokan et al., 1981). From DNA staining measurements, we observe that these cells all have a single copy of DNA (unpublished data), suggesting that they have stopped copying their DNA (Supplemental Figure S8, a–c), but perhaps continue to accumulate cell mass.
Cell two-dimensional (2D) adhesion area is often used as a proxy for cell volume. Because we simultaneously measure cell area, cell shape, and cell volume, we can examine the correlation between cell area and volume. Indeed, under all conditions, the cell area is positively correlated with the cell volume (Figure 2a); however, the slope of the area–volume correlation varies among different conditions. Moreover, the area–volume correlation depends on the 2D adhesion shape factor, defined as . Cells with circular adhesions (S ∼ 1) are consistently larger in volume for a given area (Figure 2, a and c), although there is significant noise. While cells with small adhesion areas do tend to have smaller volumes, adhesion area does not uniquely determine cell volume. For example, NuFFs generally have a larger spread area than 3T3s, but they have similar volumes. Supplemental Figure S2 also shows additional data for serum starvation and aphidicolin conditions, displaying volume distributions as well as cell area versus volume, and cell area distributions for all conditions.
Cortical contractility and tension distribution can predict cell volume
To further understand the connection between cell area and volume, we turn to a theoretical model of cell volume based on cell cortical-tension balance. When cells adhere to a flat substrate (Figure 2b), the cell volume is defined by the geometric shape of the apical cell surface. The cortex of mammalian cells consists of an actomyosin network that dynamically adjusts to the hydrostatic pressure difference between the inside and outside of the cell (Tao and Sun, 2015; Tao et al., 2017). The hydrostatic pressure difference, ΔP, arises from the slight osmotic imbalance between the cytoplasm and the extracellular medium. The pressure difference is balanced by the fluidized actomyosin cortex (Tao and Sun, 2015; Tao et al., 2017),
(1) |
where is the mechanical stress in the cortex, representing mostly myosin activity; h is the cortical thickness; T is the membrane tension; and H is the mean curvature of the cell surface. For a given pressure difference, cells can actively adjust cortical tension by activating different amounts of myosin contraction through the Rho signaling pathway (Krokan et al., 1981; Zhao et al., 2007; He et al., 2018). In most situations, , and the relationship is simplified to
where
has dimensions of length. H is a geometric property of the cell and is related to the apical cell shape (Figure 2b and Supplemenntal Figure S3). Equation 1 is consistent with single cell measurements of cortical myosin distribution in Elliott et al. (2015). If the cell adhesion size, shape, and λ are known, then the volume of the cell can be computed (Supplemental Material and Supplemental Figure S3). Theoretical results predict that for the same level of λ, the volume is a monotonically increasing function of the adhesion area (Figure 2, c and d). Moreover, for the same adhesion area, increasing λ also increases cell volume. The slope of the area–volume curve also depends on S: for the same λ, an elongated cell has a smaller volume (Figure 2, d and e). The data show that rounder cells (S > 0.5) are indeed larger than more elongated cells (S < 0.5) for the same adhesion area (Figure 2a). The model can be implemented for arbitrary adhesion shapes, and the computed three-dimensional (3D) cell shapes can be compared with reconstructed 3D shapes of cells obtained from confocal z-stack images (Figure 2f).
In live cells, we expect cortical tension and λ to vary spatially across the cell cortex, as seen, for example, in Elliott et al. (2015). The spatial distribution of λ impacts the cell volume. From our mathematical model, if λ is concentrated near the basal surface of the cell, then the cell volume is smaller (Supplemental Figure S3). If λ is uniformly distributed in the apical cell surface, then the volume is larger (Supplemental Figure S3). To obtain insights from data, we used immunofluorescence and imaged the distribution of phosphorylated myosin light chain (pMLC) using confocal z-stacks. The level of pMLC is a measure of active myosin assemblies in the cell and is a direct measure of . We also expect pMLC to reflect the level of λ, since ΔP is likely to be spatially uniform and is governed by cell osmotic control. Figure 3 shows the measured vertical distribution of pMLC from confocal measurements for all stiffness conditions. On the average, pMLC is more concentrated near the basal surface on stiffer substrates, and more uniformly distributed across the apical cell surface on softer substrates (Figure 3, b and c), in accordance with previous measurements (Han et al., 2012). This trend is reflected by the apical versus basal pMLC ratio, , where is defined as mean intensity above the dotted line in Figure 3c and is defined as the mean intensity below the dotted line (Figure 3c). The dotted line separates the basal layer of the cell from the apical region and is defined as the z-position 1 μm above the z-position that displays basal stress fibers. Cells distribute pMLC differently on different substrates, mostly due to integrin engagement and focal adhesion formation (Geiger et al., 2009). It is known that integrins and focal adhesions nucleate actomyosin bundles in stress fibers (Tojkander et al., 2012). Our mechanical model predicts that the cell volume generally increases with increasing (Figure 3d). This is because greater pMLCapical corresponds to a more hemispherical cell with a greater mean height. Indeed, we can fully explain all average cell volume data under all conditions across three different cell types by measuring the total level of pMLC (measured from epifluorescence) and the pMLC distribution (reported by the apical-to-basal ratio) (Figure 3d). To connect measured pMLC intensities with λ, a single fitting parameter is used for each cell type (Supplemental Material and Figure 3e). Moreover, treating cells with the ROCK inhibitor Y27632 decreases the overall pMLC level observed in all three cell types, and we observe a corresponding decrease in cell volume (Supplemental Figure S5). For cells with the same adhesion area, cells exposed to Y27632 showed consistently smaller cell volumes. Therefore, cortical tension and tension distribution can predict cell volume, based on the cortical force–balance condition.
Cell tension, growth, and connections to the Hippo signaling pathway
We have shown that cell cortical tension and the spatial distribution of pMLC can explain observed cell volumes on different substrates. However, it is not clear how the cell regulates growth and volume increase over the cell cycle and determine the cell volume at division. One possibility is that as cortical tension adjusts to increasing cell mass, the mechanical cue from increasing cortical tension can be a signal for regulating cell growth and division. YAP and its paralogue TAZ are downstream effectors of the Hippo pathway and have been shown to respond to the stiffness of the substrate (Dupont et al., 2011). To examine the relationship between cell tension as measured by pMLC and YAP/TAZ, we performed quantitative immunofluorescence measurements, stained YAP/TAZ, pMLC, and DNA for all three cell types under all conditions, and quantified single-cell YAP/TAZ and pMLC levels using widefield epifluorescence (Figure 4). The antibody used stained for both YAP and TAZ, and therefore, from here on, YAP refers to both YAP and TAZ. Qualitatively, NuFFs and 3T3s show predominantly nuclear localization of YAP (Supplemental Figure S6g) under all conditions; however, the total amount of nuclear YAP, denoted as ΣYAPn, did show a significant correlation with the average cell volume under all conditions (Figure 4b). The mean cytoplasmic YAP intensity was not observed to vary significantly between conditions, though there was considerable cell–cell heterogeneity. For this reason, we did not find the YAP nuclear/cytoplasmic ratio to be a useful measure of activity in these cell lines. Note that the cell volume as a function of the substrate stiffness shows opposing trends in NuFFs and 3T3s. Cells have highest volume on 12.6 kPa for 3T3s, but lowest volume on 12.6 kPa for NuFFs. Nevertheless, for both cell types, higher cell volume corresponds to higher levels of nuclear YAP. Both cell types show the highest cell volume and the highest level of nuclear YAP with aphidicolin treatment (Supplemental Figure S8, g–i).
Moreover, the total level of pMLC is correlated with total nuclear YAP, both at the individual cell level (Figure 4, a and b) and at the population average level across all conditions (Figure 4b). Here, 3T3s show a continuous rise in nuclear YAP level with increasing pMLC, but the nuclear YAP level saturates in NuFFs with increasing pMLC, suggesting that other factors may be at play in controlling nuclear YAP in NuFFs that are absent in the standard 3T3s.
From confocal images, it is possible to estimate the relative proportion of pMLC above the basal surface (apical surface) versus the pMLC in the basal surface of the cell (Figures 3, b and c, and 4b). Because it is the apical surface of the cell that determines the cell volume, we compute the total apical pMLC by summing apical intensities from Figure 3c. We observe that the level of apical pMLC is correlated with nuclear YAP for all conditions, whereas basal pMLC is not correlated with nuclear YAP (Figures 4b and 5d). These results directly implicate apical pMLC, and not total pMLC, as a possible signal for nuclear translocation of YAP. We speculate that this could be because apical and basal pMLC (associated with adhesions) may be biochemically distinct to serve different signaling functions in the cell.
MSCs show bifurcated cell tension dependence
In fully differentiated cells, we observed that apical pMLC is correlated with the level of nuclear YAP. Under conditions where cell volume is higher, the average nuclear YAP level is also higher. When we examine the same type of data for MSCs, these relationships no longer hold (Figure 5). While on the average the cell volume is correlated with nuclear YAP, nuclear YAP is no longer positively correlated with pMLC or apical pMLC. When we examine single-cell data, we discover that depending on the stiffness of the substrate, the correlation between total nuclear YAP and pMLC bifurcates, showing two distinct branches. As substrate stiffness increases, there appear to be more cells in the lower branch with lower nuclear YAP. The upper branch generally contains cells with lower nuclear-to-cytoplasmic YAP–intensity (N/C) ratio and higher overall YAP expression. The lower branch contains cells with higher N/C ratio, but lower overall YAP as well as lower nuclear YAP (Figure 5, b and c). The relative proportion of cells in the upper branch decreases with increasing stiffness, which is consistent with the results of Dupont et al. (2011). Interestingly, only a single branch is observed in the cell area versus volume correlation (Figure 2a). We hypothesize that the two branches in the nuclear YAP/pMLC correlation represent two phenotypes of MSCs, although more than 99% of our MSC population stained positively for both stem markers: CD90 and CD105 (Supplemental Figure S7). Clearly, these cells are not distinguishable through the use of these common differentiation markers. Stem cells might be sensitive to their neighboring cell identity (Smith et al., 2015) and cell density; it is possible that cell phenotype is influenced by the local environment.
To check whether cell tension and YAP relationships still hold for the observed branches, we examined the nuclear YAP and pMLC correlations for the separate branches, while assuming that their average cell volumes are similar. We included only cells that are distinct in either branch, and exclude cells that have low nuclear YAP and low pMLC near the origin. The upper/lower branch is defined by cells with ΣYAPn higher/lower than the plateau drawn in Figure 5b. We find that for individual branches, the correlations between ΣYAPn, cell volume, and apical pMLC are again preserved (Figure 5d).
If YAP plays a role in cell cycle and growth regulation, then the level of myosin can potentially influence YAP phosphorylation and allow the cell to sense its own size. Indeed, our data are suggestive of a size checkpoint between G1 and S that is determined by cell tension. Figure 6 shows the same nuclear YAP and pMLC correlation, but now labeled by cell DNA content. Nuclear YAP level rises with increasing pMLC at different rates on different-stiffness substrates, but the maximal YAPn is reached at the same level of pMLC (Figure 6). However, there is diversity in this behavior. For 3T3s, nuclear YAP seems to continue to increase in S/G2 together with pMLC and the rate of YAPn increase depends on the substrate. In NuFFs, YAPn still increases with pMLC in G1 and stops rising at the same level of pMLC, but there are some cells in G1 with high pMLC at the level of the YAPn plateau. The plateau value varies with substrate stiffness. The G1 cells with high pMLC are likely very high in volume. For MSCs in the lower branch, the behavior is similar to that of NuFFs, showing a stiffness-dependent YAPn plateau. MSCs in the upper branch are entirely different. They have high YAP expression, but no obvious checkpoint based on tension between G1 and S or distinguishing YAP levels between G1 and S. Recent work on confluent epithelial cells also suggests that cell tension influences the cell cycle (Uroz et al., 2018), consistent with the tension checkpoint idea presented here.
DISCUSSION
Cell volume is a fundamental property of living cells, and understanding how cells control their growth and volume has implications for development and wound healing as well as a variety of diseases. By performing quantitative immunofluorescence and single-cell volume measurements, we discovered that cell volume depends on cell adhesion area and substrate stiffness. This dependence may be explained by how cells balance forces at the cell surfaces. At an upstream level, cells can sense mechanical force changes in the cell membrane through tension-sensitive ion channels and the Rho pathway. When the cytoplasmic pressure, ΔP, increases (e.g., from import of organic molecules and ions to make more proteins), the cell also increases water content and increasingly activates RhoA and myosin contraction as more proteins are synthesized through the cell cycle. As a result of this regulatory system, as the cell grows, more active myosin is developed in the cortex. The spatial distribution of myosin depends on additional factors such as integrin engagement and substrate stiffness, but the overall active myosin content must increase with increasing cell size. We find that the level of apical myosin, or myosin not engaged with integrin adhesions and stress fibers, is directly related to the nuclear YAP level, which also explains why β-integrin influences YAP nuclear localization (Elosegui-Artola et al., 2016).
In addition to the proposed mechanism of a tension-based cell cycle checkpoint, we find that cell volume under different conditions can be explained quantitatively from a theoretical model of 3D cell shape. We also discover that synchronization using serum starvation and aphidicolin have opposite effects on cell volume. The heterogeneous distribution of cell volume can be understood by considering the distribution of cells through the cell cycle. The cell cycle distribution is not uniform, but concentrated near younger cells. Because expression levels of many proteins depend on the cell cycle, this result suggests that cell cycle–averaged expression-level changes would depend heavily on the relative duration of each cell cycle phase (Wang et al., 2018). Any perturbations that influence the cell cycle would indirectly influence the expression of many types of proteins. The YAP and the Hippo pathways have been proposed to influence the cell cycle (Shen and Stanger, 2015). Quantitative single-cell measurement would reveal how mechanical tension and the Hippo pathway can regulate cell growth and proliferation in a variety of conditions.
Supplementary Material
ACKNOWLEDGMENTS
The present work was supported by National Institutes of Health Grants R01GM114675 and U54CA210172. We thank Gehua Zhen for helping with isolation of MSC cells. We also acknowledge Martin Rietveld for helping with preparation of the figures.
Abbreviations used:
- mTOR
mammalian target of rapamycin
- PDMS
polydimethylsiloxane
- pMLC
phosphorylated myosin light chain
- ROCK
Rho-associated protein kinase
- TAZ
transcriptional coactivator with PDZ-binding motif, also known as WWTR1
- YAP
Yes-associated protein
Footnotes
This article was published online ahead of print in MBoC in Press (http://www.molbiolcell.org/cgi/doi/10.1091/mbc.E18-04-0213) on August 16, 2018.
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