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. Author manuscript; available in PMC: 2018 Nov 28.
Published in final edited form as: Org Lett. 2018 Sep 28;20(20):6340–6344. doi: 10.1021/acs.orglett.8b02456

A Synthetic and Computational Study of Tin-Free Reductive Tandem Cyclizations of Neutral Aminyl Radicals

Hansamali S Sirinimal 1,#, Sebastien P Hebert 1,#, Ganesh Samala 1, Heng Chen 1, Gregory J Rosenhauer 1, H Bernhard Schlegel 1,*, Jennifer L Stockdill 1,*
PMCID: PMC6261332  NIHMSID: NIHMS992147  PMID: 30265551

Abstract

5-exo, 5-exo Cyclizations of conformationally unbiased propargylic aminyl radicals proceed with excellent yield, chemoselectiv ity, and diastereoselectivity under tin-free reductive cyclization conditions, regardless of the electronic environments and intermediate radical stabilization resulting from various olefin substituents. These conditions avoid the need for slow addition of initiator and reductant. By contrast, analogous 6-exo, 5-exo cyclizations require substituents capable of intermediate radical stabilization to avoid premature reduction products. These experimental results are corroborated by computations that further establish the reactivity of these aminyl radicals upon exposure to tin-free cyclization conditions.

Graphical Abstract

graphic file with name nihms-992147-f0001.jpg


Tertiary amines are privileged structures in pharmaceutical lead targets because they improve solubility and decrease lipophilicity, while maintaining potency.1 Polycyclic molecules bearing tertiary amines are of special interest because they possess the rigid structural framework, high density of sp3 centers, and low molecular weight profile associated with “drug-like” molecules.2 We were attracted to the potential utility of neutral aminyl radicals to construct these frameworks because radical cascades have well established reactivity with predictable bond construction outcomes. While amidyl,3 iminyl,4 and aminium5 radicals are more reactive and tend to cyclize more efficiently6,7 than the more stable neutral aminyl radicals,8,9 the latter are strategically appealing because their cyclization reactions lead directly to aliphatic amine-containing products.10 In this work, we demonstrate the utility of our recently reported11 tin-free conditions for the cyclization of neutral aminyl radicals. We obtained good yields of 5-exo-initiated12 tandem cyclization products employing electronically differentiated olefins and demonstrated the electronic dependence of 6-exo cyclizations of conformationally unbiased13 substrates. Lastly, we computed the barrier heights and thermodynamics of these cyclizations in the gas phase, toluene, and tetrahydrofuran (THF).

We recently reported the development of tin-free conditions to access the ABC core of the calyciphylline A alkaloids via tandem cyclization of a neutral aminyl radical.11 In these cyclizations, an existing 6-membered ring (ring A) reduced the conformational degrees of freedom in the substrate (Scheme 1). The cyclization of N-chloroamine 1 is initiated via 6-exo cyclization, which is a rare mode of reactivity for aminyl radicals. An electron deficient olefin was required in these cyclizations as allylic alcohol derivatives led only to N–Cl reduction products.14 Finally, our experiences indicated that internal and terminal alkynes performed differently in otherwise analogous tandem cyclizations. Because of the unique features of this substrate relative to known cyclizations of aminyl radicals, we sought to establish the utility of these tin-free cyclization conditions, which also avoid slow addition15 of initiator and H-atom donor, in conformationally unbiased systems.

Scheme 1.

Scheme 1.

Structural features of substrate for calyciphylline A alkaloid synthesis.

We hypothesized that cascades beginning with cyclization of the relatively nucleophilic16 aminyl radicals would have lower barriers when cyclizing with electron deficient olefins than with non-activated olefins.17 Findings that enones analogous to substrate 1 cyclized efficiently, while the corresponding allylic alcohol14 led only to N–Cl reduction (R2N–Cl R2N–H) were consistent with our hypothesis but were insufficient to provide insight into 5-exo and 6-exo cyclizations of conformationally unbiased substrates. Thus, we selected representative unactivated and activated olefin substituents to investigate under these conditions. For convenience, we retained the terminal alkyne in the second cyclization, thus minimizing potential complications arising from formation of multiple diastereomers. We found that unactivated substrates 3a–3b18 afforded good to excellent yields of cyclized products 4a–4b when treated with azobisisobutyronitrile (AIBN) and the weak H-atom donor (iPr)3 SiH at 100°C in THF.14,19 Bicyclic amine 4b was formed as a single diastereomer. The relative stereochemistry is consistent with previous stereochemical studies of 5-exo, 5-exo tandem cyclizations.20 Enone substrate 3c also cyclized efficiently, and following thermal isomerization of the exocyclic olefin, bicyclic amine 4c was isolated in 87% yield. Cyclization of trans-3d led to a 69% yield of 4d with 95:5 dr. The cis-isomer of the styrenyl substrate (cis-3d) performed similarly to enone 3c with an isolated yield of 86% and 91:9 dr. Isomerization of the exocyclic olefin was not observed in either case, and the major product diastereomer was trans for both cyclizations.21

Previously, we observed that cyclization of N-chloroenone 1 in THF with (iPr)3SiH as an H-atom donor led to fewer reduction products than did the same cyclization in toluene with Bu3SnH.11 We presumed that the change in H-atom donor was the primary contributor to this reactivity; however, both solvents can also donate hydrogen atoms. The calculated energy barrier for intermolecular H-atom transfer from the solvent to radical 8a was 13.4 kcal/mol in implicit THF and 15.4 kcal/mol in implicit toluene (calculations were performed using the Gaussian 09 software22 and the ωB97xD level of theory and 6–31+G(d,p) basis set at 100°C).23 The barrier to hydrogen atom transfer from each reducing agent to radical 8a was also calculated at 100°C. For Et3 SnH;24 the barrier is 4.8 kcal/mol in implicit THF and 5.0 kcal/mol in implicit toluene. For (iPr)3SiH, the barrier is 13.7 kcal/mol in implicit THF and 14.4 kcal/mol in implicit toluene. Thus, the reduction products observed in toluene/tin hydride conditions likely arise due to H-atom transfer from the stannane, not toluene. These labeling experiments and computational data support our hypothesis that a weaker H-atom donor should favor tandem cyclization products in preference to N–H bond formation.11

We next calculated the energetics of the cyclization pathway from the aminyl radicals 5a–8a to vinylic radicals 5d–8d via the Beckwith-Houk transition states of each substrate (Table 1).25,26 For 5-exo-initiated cyclizations, the initial cyclization barriers (i.e., Barrier 1 = ΔG for 5b–8b → 5c–8c) range from 9.3 to 14.2 kcal/mol in implicit solvent, with the barrier for 7b in THF as an apparent outlier. These data are consistent with published computational results for aminyl radical monocyclization.7a The reverse reaction barriers range from 15.4–26.9 kcal/mol depending on the substrate and solvent. These data suggest that the first 5-exo cyclization event is likely irreversible for most of these substrates. These results are consistent with some7,27,28 previous experimental rate studies.29 For all evaluated substrates, the transformation of the N-centered radical (5a–8a) to the vinylic radical (5d–8d) is exothermic owing to the formation of two C–C bonds and a fused bicyclic system.

Table 1.

Activation barriers and relative energies of radical intermediates in the 5-exo, 5-exo pathway (ωB97xD functional, Gibbs free energies were calculated at 100°C, all values in kcal/mol).

graphic file with name nihms-992147-t0002.jpg
R solvent 5–8b barrier 1a Int 5–8cb barrier 2 Int 5–8d
H(5) (gas) 0.0 13.2 –6.2 12.4 –26.6
H PhMe 0.5 13.9 –4.2 11.6 –24.5
H THF 0.9 14.2 –3.1 10.8 –23.0
CH2OMe (6) (gas) 2.3 11.8 –6.3 6.5 –26.4
CH2OMe PhMe 2.4 12.0 –5.8 6.9 –24.8
CH2OMe THF 3.1 12.7 –6.8 7.2 –20.9
COEt (7) (gas) –1.0 11.4 –12.6 12.4 –25.6
COEt PhMe –0.3 11.4 –11.6 13.9 –23.3
COEt THF 0.8 7.3 –10.4 13.3 –21.5
Ph (8) (gas) –1.2 10.1 –15.0 15.6 –24.4
Ph PhMe 0.7 10.1 –17.5 16.2 –21.7
Ph THF 0.6 9.3 –12.7 16.3 –20.4
a

Barrier 1 is calculated from the prearranged conformation (5–8b).

b

All intermediate values are relative to the energy of the fully elongated, staggered aminyl radical (5–8a).

As expected, Barrier 1 tracks the stability of the intermediate radicals 5c–8c. The barrier for the terminal olefin (5b) was 1.4–1.9 kcal/mol higher in energy than for methoxymethyl-substituted 6b. The barrier for enone 7b was 1.8–2.5 kcal/mol lower than for 5b in the gas phase or implicit toluene, while in THF, the gap is larger than expected at 6.9 kcal/mol. The barrier for styrenyl substrate 8b was 2.5–3.5 kcal/mol lower than for 5b. While these energy differences follow the expected trend, they are relatively small, and the high temperature for cyclization is sufficient to enable cyclization even in the highest barrier case (R = H). Interestingly, Barrier 1 is higher in THF than in toluene for 5b and 6b and lower for 7b and 8b. For substrates capable of generating a stabilized C-centered radical intermediate (i.e., 7c and 8c), the barrier height for the second cyclization (Barrier 2) is significantly larger than for radicals 5c and 6c. α-Keto radical 7c is 7.3–7.4 kcal/mol more stabilized than primary radical 5c in implicit THF and toluene solvent, respectively. For styrenyl substrate 8c, these values increase to 9.6–13.3 kcal/mol, respectively.

Based on the computational results outlined above, we hypothesized that 6-exo-initiated cyclizations would be more sensitive to substitution changes because of the significantly reduced reactivity of these substrates. We selected H and Ph groups as representative electron-normal and electron-withdrawing substituents. Attempted cyclization of N-hexenyl-N-propargyl chloroamine 9 with THF/(iPr)3SiH conditions led to recovery of 77% reduced amine 11 (Scheme 3A). Bicycle 10 was not observed in the crude NMR. For the styrenyl analog of this substrate (12), cyclization product 13 was isolated in 40% yield after an acetic anhydride workup, which was required to facilitate isolation of 14 (44% yield, Scheme 3B). Presumably, formation of the reduced products (pre-11, pre-14) in these cases occurs via both intramolecular and intermolecular H-atom transfer. This is particularly true in the styrenyl system where the allylic radical is highly stabilized.20a

Scheme 3.

Scheme 3.

Sensitivity of 6-exo, 5-exo initiated cyclizations to olefin electronics.

The computational analysis for these two cyclizations is consistent with both the drop in overall reactivity for 6-exo cyclizations and in the relative success of the two substrates (Table 2). Interestingly, once the substrate (9a and 12a) adopts the appropriate conformation for cyclization (9b and 12b), the Barrier 1 values for 6-exo cyclization are not significantly different from the 5-exo substrates. However, the energy required to adopt these precyclization conformations is significant. In THF, combining the uphill conformational change with the activation barrier gives an overall transition state energy (ΔG) of 15.3 kcal/mol. Thus, it is unsurprising that the reduction pathway, which had a barrier of 13.4 kcal/mol for H-atom transfer from THF to 8a, outcompetes the cyclization. However, for the styrenyl substrate, the ΔG is 12.3 kcal/mol. It is thus expected to be competitive with reduction, and a mixture of products (13 and 14) is observed. As expected, the Barrier 2 heights and overall thermodynamics are similar to the 5,5-cyclization pathway. Overall, these computational data suggest that the rate differences between these 5-exo and 6-exo radical cyclizations are primarily derived from entropic factors associated with substrate pre-arrangement rather than an inherent decrease in reactivity for 6-exo cyclization resulting from an issue with alignment of the participating molecular orbitals.

Table 2.

Activation barriers and relative energies of radical intermediates in the 6-exo, 5-exo pathway (ωB97xD functional, Gibbs free energies were calculated at 100°C, all values in kcal/mol).

graphic file with name nihms-992147-t0003.jpg
R solvent 9b, 12b barrier 1a Int 9c, 12cb barrier 2 Int 9d, 12db
H (9) (gas) 3.1 10.5 −8.3 8.9 −29.2
H PhMe 2.1 12.3 −7.1 8.7 −28.3
H THF 2.6 12.7 −5.8 8.6 −26.8
Ph (12) (gas) 1.0 8.4 −17.4 12.9 −28.3
Ph PhMe 2.9 8.1 −16.2 13.8 −25.2
Ph THF 4.0 8.3 −14.0 13.3 −23.2
a

Barrier 1 is calculated from the prearranged conformation (9b, 12b).

b

All intermediate values are relative to the energy of the fully elongated, staggered aminyl radical (9a, 12a).

We also investigated the applicability of these conditions to the 5-exo, 6-exo substrate chloroamine 15 (Scheme 4). The desired product was formed in 39% yield and 77:23 dr. The lower dr here presumably arises from competitive rotation of the Ph group to the pseudo-equatorial position in the transition state. Interestingly, despite the initial formation of a 5-membered ring, significant amounts of reduction product (isolated as the acetate, 17) were observed (35% yield). The dependence of the formation of reduced amine on the size of the second ring suggests reversibility in the first cyclization. Meanwhile, our computational results from Table 1 support irreversible cyclization of the N-centered radical with a reverse barrier of ~23 kcal/mol for 8c → 8b. The retention of stereochemistry in reduction product 17 suggests that intermolecular H-atom transfer to the aminyl radical is faster than 5-exo cyclization in this substrate. By contrast, no reduction is observed in any of our 5-exo, 5-exo tandem cyclizations. Combining previous rate studies with these new computational and experimental data, one can conclude that the reversibility of neutral aminyl cyclizations is dependent on the intermediate radical stability, the reaction conditions, and the effects of impurities27 in the reaction.

Scheme 4.

Scheme 4.

Sensitivity of 6-exo, 5-exo initiated cyclizations to olefin electronics.

In summary, kinetically favorable 5-exo, 5-exo cyclizations of propargyl-appended aminyl radicals proceed efficiently in tin-free conditions employing a weak H-atom donor in THF, regardless of the electronic nature of the substitution on the olefin. Importantly, these conditions avoid kinetic tricks such as slow addition of the radical initiator and reducing agent. By contrast, a radical stabilizing group is essential to facilitate cyclization in 6-exo, 5-exo cyclizations of propargylic aminyl radicals. These results are supported by computational data. Finally, application to a 5-exo, 6-exo cyclization reveals a dependence on the size of the second ring in determining the ratio of cyclization to reduction. Overall, the weak H-atom donating ability of (iPr)3SiH and THF result in an unusual, if apparently synergistic, solvent/H-atom donor combination that is effective for a range of tandem cyclizations. We anticipate that these experimental and computational data will be useful for future synthetic design using neutral aminyl radicals. Further investigation into the factors influencing reversibility are ongoing in our laboratories.

Supplementary Material

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Synthetic SI

Scheme 2.

Scheme 2.

Tin-free cyclization of unactivated and activated N-chloro propargylamines.

ACKNOWLEDGMENTS

The authors thank the National Institutes of Health (R00-GM097095 for 5,5-cyclizations with R = H, R = Ph), the National Science Foundation (CAREER Award to JLS: CHE-1554752 for all remaining experiments, Grant to BHS: CHE-1464450), and Wayne State University for generous financial support (startup funds to JLS, Rumble-Schaap Fellowship to HSS and use of the computational grid). We thank Mate-ria, Inc. for the kind donation of all metathesis catalysts used in the substrate syntheses. We are grateful to the staff of the WSU Lumigen Instrument Center, especially Nicholas Peraino, for spectroscopic support, and we thank Dr. Ahmad A. Ibrahim (WSU) for helpful discussions.

ASSOCIATED CONTENT

Supporting Information

The Supporting Information is available free of charge on the ACS Publications website.

Experimental procedures and spectroscopic data (PDF) Computational methodology and Cartesian coordinates (PDF)

The authors declare no competing financial interests.

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