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. 2018 Nov 17;10(11):1791. doi: 10.3390/nu10111791

Table 2.

Common variants (MAF ≥ 5%) with p < 1 × 10−8. a

Desaturase Gene Lead SNP Chr:Position (b37) EAF Effect Allele/
Other Allele
Serum Adipose Tissue
Direction p n Direction p n
D5D FADS1 rs174549 11:61571382 0.33 A/G 1.9 × 10−70 1448 1.1 × 10−27 766
D6D FADS2 rs138194593 11:61620703 0.63 CTCTT/C + 3.0 × 10−67 1448 7.9 × 10−1 611
D6D PDXDC1 rs6498540 16:15130594 0.71 A/G + 4.8 × 10−8 1448 2.9 × 10−1 611
D6D near MC4R rs9957425 18:57462103 0.61 T/C + 3.7 × 10−8 1448 9.0 × 10−1 611
SCD PKD2L1 rs603424 10:102075479 0.14 A/G 1.6 × 10−4 1453 2.2 × 10−19 783

a A, adenine; C, cytosine; Chr, chromosome; b37, NCBI build 37; D5D, δ-5-desaturase; D6D, δ-6-desaturase; EAF, effect allele frequency; FADS1, fatty acid desaturase 1; FADS2, fatty acid desaturase 2; G, guanine; MC4R, melanocortin 4 receptor; PDXDC1, pyridoxal-dependent decarboxylase domain containing 1; PKD2L1, polycystic kidney disease 2-like 1; SCD, Stearoyl-CoA desaturase; T, thymine.