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Acta Crystallographica Section E: Crystallographic Communications logoLink to Acta Crystallographica Section E: Crystallographic Communications
. 2018 Nov 22;74(Pt 12):1851–1856. doi: 10.1107/S2056989018016389

2-{[2,8-Bis(tri­fluoro­meth­yl)quinolin-4-yl](hy­droxy)meth­yl}piperidin-1-ium tri­chloro­acetate: crystal structure and Hirshfeld surface analysis

James L Wardell a,, Mukesh M Jotani b, Edward R T Tiekink c,*
PMCID: PMC6281115  PMID: 30574387

The mefloquinium cation in the title salt is l-shaped as the piperidin-1-ium group is nearly orthogonal to the quinolinyl residue. Supra­molecular chains arise in the crystal as a result of charge-assisted O—HO and N—H⋯O hydrogen-bonding.

Keywords: crystal structure, mefloquine, salt, hydrogen-bonding, Hirshfeld surface analysis

Abstract

The asymmetric unit of the centrosymmetric title salt, C17H17F6N2O+·C2Cl3O2 , comprises a single ion-pair. The hy­droxy-O and ammonium-N atoms lie to the same side of the cation, a disposition maintained by a charge-assisted ammonium-N—H⋯O(hy­droxy) hydrogen bond [the Oh—Cm—Cm–Na (h = hy­droxy, m = methine, a = ammonium) torsion angle is 58.90 (19)°]. The piperidin-1-ium group is approximately perpendicular to the quinolinyl residue [Cq—Cm—Cm–Na (q = quinolin­yl) is −178.90 (15)°] so that the cation, to a first approximation, has the shape of the letter L. The most prominent feature of the supra­molecular association in the crystal is the formation of chains along the a-axis direction, being stabilized by charge-assisted hydrogen-bonds. Thus, ammonium-N+—H⋯O(carboxyl­ate) hydrogen bonds are formed whereby two ammonium cations bridge a pair of carboxyl­ate-O atoms, leading to eight-membered {⋯O⋯HNH}2 synthons. The resulting four-ion aggregates are linked into the supra­molecular chain via charge-assisted hydroxyl-O—H⋯O(carboxyl­ate) hydrogen bonds. The connections between the chains, leading to a three-dimensional architecture, are of the type C—X⋯π, for X = Cl and F. The analysis of the calculated Hirshfeld surface points to the importance of X⋯H contacts to the surface (X = F, 25.4% and X = Cl, 19.7%) along with a significant contribution from O⋯H hydrogen-bonds (10.2%). Conversely, H⋯H contacts, at 12.4%, make a relatively small contribution to the surface.

Chemical context  

Kryptoracemic behaviour is an inter­esting but rare phenomenon whereby enanti­omeric mol­ecules crystallize in one of the 65 Sohncke space groups. Sohncke space groups lack an inversion centre, a rotatory inversion axis, a glide plane or a mirror plane, implying Z′ would usually be greater than 1 (unless the mol­ecule lies on a rotation axis) and in which enanti­omeric mol­ecules, when present, are related by a non-crystallographic symmetry, e.g. a non-crystallographic centre of inversion. Reviews of this phenomenon have appeared for organic compounds (Fábián & Brock, 2010) and for coordination complexes (Bernal & Watkins, 2015). For organic mol­ecules, kryptoracemic behaviour is uncommon and is found in only 0.1% of structures (Fábián & Brock, 2010). It is therefore of inter­est that pharmacologically relevant (Gonçalves et al., 2012) mefloquine/derivatives, for which there are about 30 structures included in the Cambridge Structural Database (Groom et al., 2016), present two examples of krypto­racemates (Jotani et al., 2016; Wardell, Wardell et al., 2016). In order to investigate reasons for this seemingly high propensity towards kryptoracemic behaviour in mefloquine derivatives, crystallographic studies of different mefloquinium salts have subsequently been performed (Wardell et al., 2018) and in a continuation of these, herein the crystal and mol­ecular structures of the title salt, (I), isolated from the 1:1 crystallization of racemic mefloquine and tri­chloro­acetic acid are described. This is complemented by an analysis of its calculated Hirshfeld surface.graphic file with name e-74-01851-scheme1.jpg

Structural commentary  

The two ions comprising the asymmetric unit of salt (I) are shown in Fig. 1. The crystal of (I) is racemic. Each cation contains two chiral centres and the illustrated cation in the arbitrarily chosen asymmetric unit is S at C12 and R at C13, i.e. conforming to the [(−)-erythro-mefloquinium] isomer. That protonation from the carb­oxy­lic acid to the base occurred during co-crystallization is readily seen in the equivalence of the C18 O2, O3 bond lengths, i.e. 1.238 (3) and 1.245 (3) Å, respectively. The formation of the piperidin-1-ium cation is supported by the pattern of hydrogen bonding involving the ammonium-N—H H atoms. Indeed, an intra­molecular ammonium-N+—H⋯O(hy­droxy) hydrogen bond is formed ensuring the hydroxyl-O1 and ammonium-N2 atoms are orientated to the same side of the cation with the O1—C12—C13—N2 torsion angle of 58.90 (19)° angle indicating a + syn-clinal relationship. The r.m.s. deviation for the 10 atoms comprising the quinolinyl residue is 0.0147 Å, with the hy­droxy-O1 [−0.299 (3) Å] and ammonium-N2 [1.490 (4) Å] atoms lying to either side of the plane. The dihedral angle of 74.00 (5)° formed between the fused ring system and the best plane through the piperidin-1-ium ring indicates that, overall, the mol­ecule has the shape of the letter L. This is confirmed by the +syn-clinal C3—C12—C13—C17 torsion angle of 60.1 (2)°.

Figure 1.

Figure 1

The mol­ecular structures of the two ions comprising the asymmetric unit of (I) showing the atom-labelling scheme and displacement ellipsoids at the 70% probability level. The dashed line signifies an N—H⋯O hydrogen bond.

In the anion, the r.m.s. deviation through the C2O2 atoms is 0.0131 Å with the Cl3 atom lying to one side of the plane [deviation = 1.7153 (3) Å] whereas the Cl1 [−0.9341 (3) Å] and Cl2 [−0.6170 (4) Å] atoms lie to the other side.

Supra­molecular features  

The presence of charge-assisted hydrogen bonds between the constituent ions lead to linear, supra­molecular chains along the a-axis direction in the crystal of (I), Table 1 and Fig. 2(a). The most prominent feature of the packing is the formation of centrosymmetric, eight-membered {⋯O⋯HNH}2 synthons, which arise as a result of ammonium-N+—H⋯O(carboxylate) hydrogen bonds whereby two ammonium cations bridge, via both hydrogen atoms, a pair of carboxyl­ate-O2 atoms. The four-ion aggregates are linked into the chain via charge-assisted hydroxyl-O—H⋯O(carboxyl­ate) hydrogen bonds. These lead to larger centrosymmetric agglomerates, i.e. 18-membered {⋯OCO⋯HOC2NH}2 synthons. The connections between the chains are of the type C—X⋯π, for X = Cl and F. Such inter­actions are inherently weak, providing energies of stabilization less than 4 kcal mol−1, with those for inter­actions involving chloride atoms being greater than those with fluoride (Tsuzuki et al., 2016). In the crystal of (I), C—Cl⋯π(C6-quinolin­yl) inter­actions are formed whereby the C—Cl bond is approximately parallel to the C6 ring. Each of the fluoride atoms bound to the C10 atom participates in a C—F⋯π contact as these CF3 groups lie in regions flanked by quinolinyl residues. Two of the contacts are as for the chloride atom, i.e. side on, whereas the other is best described as an end-on C—F⋯π contact as the angle subtended at the F1 atom is 170.95 (14)°. The aforementioned inter­actions combine to form a three-dimensional architecture. A view of the unit-cell contents is shown in Fig. 2(b).

Table 1. Hydrogen-bond geometry (Å, °).

Cg1 and Cg2 are the centroids of the C4–C9 and N1/C1–C4/C9 rings, respectively.

D—H⋯A D—H H⋯A DA D—H⋯A
N2—H1N⋯O1 0.88 (2) 2.42 (2) 2.734 (3) 102 (2)
N2—H1N⋯O2i 0.88 (2) 1.99 (2) 2.769 (3) 146 (2)
O1—H1O⋯O3ii 0.83 (2) 1.89 (2) 2.702 (2) 165 (2)
N2—H2N⋯O2 0.88 (2) 2.00 (2) 2.869 (2) 173 (2)
N2—H2N⋯O3 0.88 (2) 2.47 (2) 3.043 (3) 124 (1)
C19—Cl3⋯Cg1iii 1.78 (1) 3.61 (1) 4.709 (3) 118 (1)
C10—F1⋯Cg2iv 1.34 (1) 3.07 (1) 4.395 (2) 171 (1)
C10—F2⋯Cg1ii 1.34 (1) 3.44 (1) 3.788 (2) 95 (1)
C10—F3⋯Cg1ii 1.32 (1) 3.24 (1) 3.788 (2) 104 (1)

Symmetry codes: (i) Inline graphic; (ii) Inline graphic; (iii) Inline graphic; (iv) Inline graphic.

Figure 2.

Figure 2

Mol­ecular packing in (I): (a) The supra­molecular chain along the a axis, being sustained by O—H⋯O and N—H⋯O hydrogen bonding with non-participating H atoms omitted and (b) a view of the unit-cell contents shown in projection down the a axis, the axis of propagation of the chain shown in (a). The C—Cl⋯π and C—F⋯π inter­actions are shown as pink and purple dashed lines, respectively.

Hirshfeld surface analysis  

The Hirshfeld surface calculations for the title salt (I) were performed in accord with an earlier publication on a related organic salt (Jotani et al., 2018). This analysis provides a convenient means to describe the formation of the salt through the charge-assisted N—H⋯O hydrogen bonds and C—H⋯O contacts, and the influence of weak inter­actions involving halide substituents in the crystal. The pair of overlapping bright-red spots near the ammonium-H2N atom and carboxyl­ate-O2 and O3 atoms of the anion on the Hirshfeld surfaces mapped over d norm in Fig. 3 represent the charge-assisted N—H⋯O hydrogen-bonds; the methyl­ene-C13—H⋯O3 contact, Table 2, on the Hirshfeld surface is evident as the diminutive-red spot between the respective atoms in Fig. 3(b). The presence of bright- and broad-red spots near the ammonium-H1N and H2N, hydroxyl-H1O, carboxyl­ate-O2 and O3 atoms on the d norm-mapped Hirshfeld surfaces indicate the influence of the charge-assisted N—H⋯O and O—H⋯O hydrogen bonds, as indicated in Fig. 4(a) and (b). The donors and acceptors of inter­molecular inter­actions in the crystals of (I) are also highlighted with blue and red regions corresponding to positive and negative electrostatic potentials, respectively, on the Hirshfeld surfaces mapped over electrostatic potentials in Fig. 5. The presence of the faint-red spots near the CF3 atoms as well as the other atoms of the cation, Fig. 4(a) and (c), and the Cl1 atom, Fig. 3(b), indicate the involvement of these atoms in short inter­atomic contacts, Table 2. The effect of inter­molecular C—X⋯π inter­actions (X = F, Cl), Table 1, is illustrated in Fig. 6 through the blue and orange regions near the respective donors and acceptors on the Hirshfeld surfaces mapped with shape-index properties.

Figure 3.

Figure 3

Views of the Hirshfeld surface of (I) mapped over d norm in the range −0.171 to +1.475 a.u. for the (a) cation and (b) anion, highlighting N—H⋯O and C—H⋯O contacts as black dashed lines.

Table 2. Summary of short inter­atomic contacts (Å) in (I)a .

Contact Distance Symmetry operation
C1⋯F1 3.130 (2) x, −y, 2 − z
C7⋯F3 3.127 (3) 1 + x, y, z
O3⋯H13 2.49 x, y, z
F1⋯F2 2.8618 (18) −1 − x, −y, 2 − z
F1⋯H17B 2.58 x, −y, 2 − z
F5⋯Cl1 3.2065 (16) 1 − x, 1 − y, 1 − z
F2⋯H13 2.46 −1 + x, y, z

Note: (a) Values are as calculated in CrystalExplorer (Spackman & Jayatilaka, 2009).

Figure 4.

Figure 4

Views of the Hirshfeld surface of (I) mapped over d norm in the range −0.121 to +1.475 a.u. for the (a) cation, (b) anion and (c) ion pair. The N—H⋯O, O—H⋯O and C—H⋯O contacts are shown as black dashed lines. The faint-red spots near the labelled atoms in (b) and (c) indicate the short inter­atomic contacts (see text and Table 2).

Figure 5.

Figure 5

A view of the Hirshfeld surface of (I) mapped over the electrostatic potential in the range −0.128 to + 0.215 a.u. The red and blue regions represent negative and positive electrostatic potentials, respectively.

Figure 6.

Figure 6

Three views of Hirshfeld surface of (I) mapped over the shape-index property highlighting (a) C—Cl⋯π/π⋯Cl—C contacts through yellow dotted lines, (b) and (c) C—F⋯π/π⋯F—C contacts with through black dotted lines. The ‘1′, ‘2′ and ‘3′ refer to the F1—F3 atoms, respectively

The overall two-dimensional fingerprint plot for (I), Fig. 7, and those delineated into H⋯H, O⋯H/H⋯O, F⋯H/H⋯F, F⋯F, C⋯F/F⋯C, C⋯Cl/Cl⋯C, Cl⋯H/H⋯Cl and Cl⋯Cl contacts (McKinnon et al., 2007) are illustrated in Fig. 7; the percentage contributions from the different inter­atomic contacts to the Hirshfeld surfaces are summarized in Table 3. The relatively small contribution, i.e. 12.4%, from H⋯H contacts to the Hirshfeld surfaces of (I) is due to the presence of terminal halide substituents in both the cation and anion and their relatively high contribution to a major portion of the surface.

Figure 7.

Figure 7

The full two-dimensional fingerprint plot for (I) and those delineated into H⋯H, O⋯H/H⋯O, F⋯H/H⋯F, F⋯F, C⋯F/F⋯C, C⋯Cl/Cl⋯C, Cl⋯H/H⋯Cl and Cl⋯Cl contacts.

Table 3. Percentage contributions of inter­atomic contacts to the Hirshfeld surface for (I).

  Percentage contribution
Contact (I)
H⋯H 12.4
O⋯H/H⋯O 10.2
F⋯H/H⋯F 25.4
F⋯F 7.7
Cl⋯H/H⋯Cl 19.7
C⋯F/F⋯C 5.4
C⋯Cl/Cl⋯C 5.3
Cl⋯Cl 4.6
C⋯H/H⋯C 3.4
Cl⋯F/F⋯Cl 2.7
N⋯H/H⋯N 1.3
N⋯F/F⋯N 1.0
O⋯O 0.5
C⋯C 0.3
C⋯O/O⋯C 0.2
Cl⋯O/O⋯Cl 0.1

The inter­molecular N—H⋯O and O—H⋯O hydrogen-bonds in the packing of (I) indicate a significant contribution from O⋯H/H⋯O contacts to the surface and these are evident as the two pairs of superimposed long spikes with the tips at d e + d i ∼1.7 Å in the delineated fingerprint plot. The largest percentage contribution to the Hirshfeld surface are from F⋯H/H⋯F contacts, i.e. 25.4%. This is due to the presence of a number of short inter­atomic H⋯F contacts, Table 2, which are characterized as the pair of short spikes at d e + d i ∼ 2.5 Å in the corresponding delineated fingerprint plot. An arrow-like tip at d e + d i ∼ 2.8 Å in the fingerprint delineated into F⋯F contacts is due to the effect of the short inter­atomic F⋯F contact summarized in Table 2. The presence of short inter­atomic C⋯F/F⋯C contacts, Table 2, and C—F⋯π contacts (Table 1) involving fluoride atoms substituted at the methyl-C10 atom is evident from the forceps-like distribution of points in the fingerprint plot delin­eated into these contacts. The C—Cl⋯π contact, Table 1, involving the carboxyl­ate-Cl3 atom, Fig. 6(a), is viewed as the spear-shaped distribution of points with the pair of adjoining tips at d e + d i ∼ 3.5 Å in the fingerprint plot delineated into C⋯Cl/Cl⋯C contacts. Although the inter­atomic Cl⋯H/H⋯Cl and Cl⋯Cl contacts make significant contributions to the Hirshfeld surface of (I), Table 3, and are reflected in the forceps-like and pencil-tip like distributions of points, respectively, in their delineated fingerprint plots, they occur at van der Waals separations. The small contribution from the other inter­atomic contacts to the Hirshfeld surface of (I), listed in Table 3, show negligible influence upon the packing.

Database survey  

As noted in the Chemical context, there are two mefloquine derivatives that exhibit kryptoracemic behaviour with both examples being isolated after attempts at chiral resolution of racemic mefloquine with different carb­oxy­lic acids. In one example, two mefloquinium cations are related across a pseudo centre of inversion, and the charge balance is provided by two crystallographically independent 3,3,3-tri­fluoro-2-meth­oxy-2-phenyl­propano­ate anions, i.e. (+)-PhC(CF3)(OMe)CO2 (Wardell, Wardell et al., 2016). That it is not necessary to have chiral carboxyl­ate anions is seen in the second example of kryptoracemic behaviour whereby, as a result of incomplete substitution of chloride by 4-fluoro­benzene­sulfonate during an anion exchange experiment, the asymmetric unit comprises a pair of pseudo-enanti­omeric mefloquinium cations with equal numbers of chloride and 4-fluoro­benzene­sulfonate counter-ions (Jotani et al., 2016).

There are a number of other structurally characterized mefloquinium salts, namely three isomeric n-nitro­benzoates (Wardell et al., 2011), 3-amino-5-nitro­benzoate sesquihydrate (de Souza et al., 2011), hy­droxy(phen­yl)acetate hemihydrate (Wardell, Jotani et al., 2016) and tri­fluoro­acetate tri­fluoro­acetic acid hemihydrate (Low & Wardell, 2017), and all of these crystallize in centrosymmetric space groups with equal numbers of the mefloquinium enanti­omers. Further studies into the inter­esting phenomenon of kryptoracemic behaviour in mefloquinium salts are underway.

Synthesis and crystallization  

A solution of mefloquinium chloride (1 mmol) and sodium di­fluoro­choro­acetate (1 mmol) in EtOH (10 ml) was refluxed for 20 min. The reaction mixture was left at room temperature and after two days, colourless slabs of (I) were collected; m.p. 473–475 K. 1H NMR (DMSO-d 6) δ: 1.20–1.35(2H, m), 1.55–1.75(4H, m), 3.04 (1H, br,t), 3.53 (1H, br.d), 5.90 (1H, s), 6.94 (1H, br.d), 8.01 (1H, t, J = 8.0Hz), 8.13 (1H, s), 8.42 (1H, d, J = 8.02Hz), 8.72 (1H, d, J = 8.0Hz), 9.48 (1H, br,s); resonances due to OH and NH were not observed. 13C NMR (DMSO-d6) δ: 21.43 (2×), 21.59, 44.51, 58.90, 67.85, 135.50. 121.17 (J C,F = 273.8 Hz), 121.21 (J C,F = 311.0 Hz), 123.64 (J C,F = 271.7 Hz), 126.37, 127.93 (J C,F = 29.2 Hz), 128.32, 128.68. 129.9 (J C,F = 5.2Hz), 142.78, 146.73 (J C,F = 34.5 Hz), 150.97, 159.82 (J C,F = 25.2 Hz). 19F NMR (DMSO-d 6) δ: −58.65, −58.84, −66.68.

Refinement  

Crystal data, data collection and structure refinement details are summarized in Table 4. The carbon-bound H atoms were placed in calculated positions (C—H = 0.95–1.00 Å) and were included in the refinement in the riding-model approximation, with U iso(H) set to 1.2U eq(C). The O- and N-bound H atoms were refined with distance restraints 0.84±0.01 and 0.88±0.01 Å, respectively, and refined with U iso(H) = 1.5U eq(O) and 1.2U eq(N), respectively. Owing to poor agreement, most likely due to inter­ference from the beam-stop, two reflections, i.e. (100) and (101), were omitted from the final cycles of refinement.

Table 4. Experimental details.

Crystal data
Chemical formula C17H17F6N2O·C2Cl3O2
M r 541.69
Crystal system, space group Triclinic, P Inline graphic
Temperature (K) 120
a, b, c (Å) 6.8087 (2), 11.8568 (5), 15.2562 (6)
α, β, γ (°) 67.473 (2), 81.663 (2), 89.824 (3)
V3) 1123.77 (7)
Z 2
Radiation type Mo Kα
μ (mm−1) 0.48
Crystal size (mm) 0.30 × 0.26 × 0.21
 
Data collection
Diffractometer Bruker–Nonius Roper CCD camera on κ-goniostat
Absorption correction Multi-scan (SADABS; Sheldrick, 2007)
T min, T max 0.636, 0.746
No. of measured, independent and observed [I > 2σ(I)] reflections 23628, 5114, 3880
R int 0.055
(sin θ/λ)max−1) 0.648
 
Refinement
R[F 2 > 2σ(F 2)], wR(F 2), S 0.047, 0.133, 1.02
No. of reflections 5114
No. of parameters 307
No. of restraints 3
H-atom treatment H atoms treated by a mixture of independent and constrained refinement
Δρmax, Δρmin (e Å−3) 0.81, −0.59

Computer programs: DENZO (Otwinowski & Minor, 1997), COLLECT (Hooft, 1998), SHELXS (Sheldrick, 2008), SHELXL2014/7 (Sheldrick, 2015), ORTEP-3 for Windows (Farrugia, 2012), DIAMOND (Brandenburg, 2006) and publCIF (Westrip, 2010).

Supplementary Material

Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S2056989018016389/hb7786sup1.cif

e-74-01851-sup1.cif (790.9KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S2056989018016389/hb7786Isup2.hkl

e-74-01851-Isup2.hkl (406.9KB, hkl)

CCDC reference: 1879700

Additional supporting information: crystallographic information; 3D view; checkCIF report

Acknowledgments

The use of the EPSRC X-ray crystallographic service at the University of Southampton, England, and the valuable assistance of the staff there is gratefully acknowledged.

supplementary crystallographic information

Crystal data

C17H17F6N2O·C2Cl3O2 Z = 2
Mr = 541.69 F(000) = 548
Triclinic, P1 Dx = 1.601 Mg m3
a = 6.8087 (2) Å Mo Kα radiation, λ = 0.71073 Å
b = 11.8568 (5) Å Cell parameters from 25711 reflections
c = 15.2562 (6) Å θ = 2.9–27.5°
α = 67.473 (2)° µ = 0.48 mm1
β = 81.663 (2)° T = 120 K
γ = 89.824 (3)° Slab, colourless
V = 1123.77 (7) Å3 0.30 × 0.26 × 0.21 mm

Data collection

Bruker–Nonius Roper CCD camera on κ-goniostat diffractometer 5114 independent reflections
Radiation source: Bruker-Nonius FR591 rotating anode 3880 reflections with I > 2σ(I)
Graphite monochromator Rint = 0.055
Detector resolution: 9.091 pixels mm-1 θmax = 27.4°, θmin = 2.9°
φ & ω scans h = −8→8
Absorption correction: multi-scan (SADABS; Sheldrick, 2007) k = −15→15
Tmin = 0.636, Tmax = 0.746 l = −19→19
23628 measured reflections

Refinement

Refinement on F2 Primary atom site location: structure-invariant direct methods
Least-squares matrix: full Hydrogen site location: mixed
R[F2 > 2σ(F2)] = 0.047 H atoms treated by a mixture of independent and constrained refinement
wR(F2) = 0.133 w = 1/[σ2(Fo2) + (0.0695P)2 + 0.5906P] where P = (Fo2 + 2Fc2)/3
S = 1.02 (Δ/σ)max < 0.001
5114 reflections Δρmax = 0.81 e Å3
307 parameters Δρmin = −0.59 e Å3
3 restraints

Special details

Geometry. All esds (except the esd in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell esds are taken into account individually in the estimation of esds in distances, angles and torsion angles; correlations between esds in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell esds is used for estimating esds involving l.s. planes.
Refinement. Owing to poor agreement, perhaps owing to interference from the beam-stop, two reflections, i.e. (1 0 0) and (1 0 1), were omitted from the final cycles of the refinement.

Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)

x y z Uiso*/Ueq
F1 −0.22880 (19) −0.00170 (13) 1.00487 (9) 0.0378 (3)
F2 −0.38289 (18) 0.05158 (14) 0.88298 (9) 0.0392 (3)
F3 −0.36487 (19) 0.17017 (13) 0.95862 (9) 0.0384 (3)
F4 0.1664 (2) 0.31406 (13) 1.01713 (9) 0.0430 (3)
F5 0.0401 (2) 0.46009 (13) 0.91079 (10) 0.0454 (4)
F6 0.3286 (3) 0.48695 (15) 0.94377 (13) 0.0590 (5)
O1 0.1401 (2) 0.03503 (14) 0.64074 (11) 0.0300 (3)
H1O 0.058 (3) 0.084 (2) 0.6145 (19) 0.045*
N1 0.0200 (3) 0.23331 (16) 0.88257 (12) 0.0255 (4)
N2 0.5142 (3) −0.04940 (16) 0.63900 (12) 0.0246 (4)
H1N 0.420 (3) −0.084 (2) 0.6219 (17) 0.029*
H2N 0.565 (3) 0.0117 (16) 0.5858 (11) 0.029*
C1 −0.0699 (3) 0.15108 (19) 0.86236 (14) 0.0248 (4)
C2 0.0070 (3) 0.10584 (19) 0.79255 (14) 0.0253 (4)
H2 −0.0687 0.0471 0.7811 0.030*
C3 0.1930 (3) 0.14755 (18) 0.74109 (14) 0.0232 (4)
C4 0.2993 (3) 0.23707 (18) 0.76020 (14) 0.0234 (4)
C5 0.4941 (3) 0.28638 (19) 0.71304 (15) 0.0280 (4)
H5 0.5585 0.2614 0.6645 0.034*
C6 0.5892 (3) 0.3690 (2) 0.73676 (17) 0.0330 (5)
H6 0.7195 0.4006 0.7048 0.040*
C7 0.4967 (4) 0.4085 (2) 0.80829 (17) 0.0341 (5)
H7 0.5657 0.4656 0.8244 0.041*
C8 0.3084 (3) 0.36492 (19) 0.85441 (15) 0.0294 (5)
C9 0.2044 (3) 0.27756 (18) 0.83188 (14) 0.0244 (4)
C10 −0.2631 (3) 0.0942 (2) 0.92713 (15) 0.0283 (4)
C11 0.2098 (4) 0.4061 (2) 0.93101 (17) 0.0365 (5)
C12 0.2837 (3) 0.09461 (19) 0.66926 (14) 0.0236 (4)
H12 0.3575 0.1615 0.6113 0.028*
C13 0.4279 (3) −0.00337 (18) 0.71443 (14) 0.0233 (4)
H13 0.5380 0.0361 0.7315 0.028*
C14 0.6690 (3) −0.1405 (2) 0.67050 (17) 0.0317 (5)
H14A 0.7833 −0.1014 0.6836 0.038*
H14B 0.7175 −0.1693 0.6187 0.038*
C15 0.5805 (3) −0.2485 (2) 0.76066 (17) 0.0330 (5)
H15A 0.6859 −0.3051 0.7841 0.040*
H15B 0.4774 −0.2935 0.7452 0.040*
C16 0.4882 (4) −0.2063 (2) 0.83963 (16) 0.0332 (5)
H16A 0.4233 −0.2776 0.8957 0.040*
H16B 0.5940 −0.1701 0.8607 0.040*
C17 0.3350 (3) −0.11181 (19) 0.80364 (15) 0.0291 (5)
H17A 0.2230 −0.1503 0.7883 0.035*
H17B 0.2819 −0.0829 0.8548 0.035*
Cl1 0.91440 (9) 0.34265 (7) 0.30595 (4) 0.04821 (19)
Cl2 1.10599 (11) 0.35855 (7) 0.45615 (5) 0.0571 (2)
Cl3 0.70646 (12) 0.44205 (6) 0.43618 (6) 0.0577 (2)
O2 0.6471 (2) 0.16019 (15) 0.46652 (12) 0.0369 (4)
O3 0.8236 (2) 0.16197 (15) 0.57789 (11) 0.0352 (4)
C18 0.7750 (3) 0.20401 (19) 0.49632 (15) 0.0259 (4)
C19 0.8759 (3) 0.3309 (2) 0.42622 (16) 0.0319 (5)

Atomic displacement parameters (Å2)

U11 U22 U33 U12 U13 U23
F1 0.0324 (7) 0.0401 (8) 0.0286 (7) 0.0043 (6) −0.0029 (5) −0.0006 (6)
F2 0.0299 (7) 0.0574 (9) 0.0320 (7) −0.0063 (6) −0.0034 (5) −0.0194 (7)
F3 0.0352 (7) 0.0435 (8) 0.0343 (7) 0.0093 (6) 0.0029 (6) −0.0156 (6)
F4 0.0635 (9) 0.0430 (8) 0.0268 (7) 0.0074 (7) −0.0131 (6) −0.0160 (6)
F5 0.0657 (10) 0.0403 (8) 0.0359 (8) 0.0224 (7) −0.0090 (7) −0.0208 (7)
F6 0.0770 (11) 0.0524 (10) 0.0639 (11) −0.0129 (8) −0.0020 (9) −0.0435 (9)
O1 0.0328 (8) 0.0348 (9) 0.0298 (8) 0.0081 (6) −0.0138 (6) −0.0174 (7)
N1 0.0295 (9) 0.0247 (9) 0.0230 (8) 0.0073 (7) −0.0070 (7) −0.0088 (7)
N2 0.0304 (9) 0.0238 (9) 0.0227 (9) 0.0022 (7) −0.0058 (7) −0.0118 (7)
C1 0.0274 (10) 0.0259 (10) 0.0204 (10) 0.0069 (8) −0.0062 (8) −0.0072 (8)
C2 0.0281 (10) 0.0247 (10) 0.0243 (10) 0.0032 (8) −0.0076 (8) −0.0097 (8)
C3 0.0292 (10) 0.0202 (10) 0.0200 (9) 0.0044 (8) −0.0059 (8) −0.0068 (8)
C4 0.0290 (10) 0.0187 (9) 0.0216 (10) 0.0052 (8) −0.0066 (8) −0.0060 (8)
C5 0.0324 (11) 0.0231 (10) 0.0258 (10) 0.0023 (8) −0.0023 (8) −0.0073 (8)
C6 0.0346 (11) 0.0231 (11) 0.0356 (12) −0.0030 (9) −0.0024 (9) −0.0062 (9)
C7 0.0433 (13) 0.0210 (10) 0.0381 (13) −0.0012 (9) −0.0123 (10) −0.0092 (9)
C8 0.0416 (12) 0.0208 (10) 0.0269 (11) 0.0042 (9) −0.0084 (9) −0.0094 (9)
C9 0.0310 (10) 0.0203 (10) 0.0220 (10) 0.0052 (8) −0.0073 (8) −0.0072 (8)
C10 0.0301 (11) 0.0312 (11) 0.0239 (10) 0.0066 (9) −0.0068 (8) −0.0103 (9)
C11 0.0532 (14) 0.0278 (11) 0.0333 (12) 0.0029 (10) −0.0092 (11) −0.0162 (10)
C12 0.0274 (10) 0.0253 (10) 0.0195 (9) 0.0032 (8) −0.0056 (8) −0.0094 (8)
C13 0.0284 (10) 0.0240 (10) 0.0206 (9) 0.0032 (8) −0.0050 (8) −0.0117 (8)
C14 0.0305 (11) 0.0312 (12) 0.0374 (12) 0.0072 (9) −0.0062 (9) −0.0174 (10)
C15 0.0360 (12) 0.0257 (11) 0.0382 (13) 0.0059 (9) −0.0094 (10) −0.0121 (10)
C16 0.0425 (12) 0.0259 (11) 0.0289 (11) 0.0054 (9) −0.0102 (9) −0.0063 (9)
C17 0.0361 (11) 0.0272 (11) 0.0225 (10) 0.0056 (9) −0.0053 (9) −0.0077 (9)
Cl1 0.0439 (3) 0.0694 (5) 0.0241 (3) 0.0045 (3) −0.0020 (2) −0.0114 (3)
Cl2 0.0573 (4) 0.0519 (4) 0.0510 (4) −0.0245 (3) −0.0205 (3) −0.0033 (3)
Cl3 0.0819 (5) 0.0298 (3) 0.0581 (4) 0.0197 (3) −0.0082 (4) −0.0145 (3)
O2 0.0414 (9) 0.0423 (9) 0.0345 (9) −0.0046 (7) −0.0039 (7) −0.0238 (8)
O3 0.0335 (8) 0.0359 (9) 0.0297 (8) 0.0021 (7) −0.0083 (7) −0.0045 (7)
C18 0.0260 (10) 0.0250 (10) 0.0294 (11) 0.0046 (8) −0.0019 (8) −0.0145 (9)
C19 0.0379 (12) 0.0302 (12) 0.0265 (11) 0.0027 (9) −0.0079 (9) −0.0088 (9)

Geometric parameters (Å, º)

F1—C10 1.341 (2) C7—C8 1.367 (3)
F2—C10 1.341 (2) C7—H7 0.9500
F3—C10 1.324 (2) C8—C9 1.429 (3)
F4—C11 1.340 (3) C8—C11 1.504 (3)
F5—C11 1.337 (3) C12—C13 1.538 (3)
F6—C11 1.344 (3) C12—H12 1.0000
O1—C12 1.417 (2) C13—C17 1.523 (3)
O1—H1O 0.835 (10) C13—H13 1.0000
N1—C1 1.307 (3) C14—C15 1.519 (3)
N1—C9 1.364 (3) C14—H14A 0.9900
N2—C13 1.500 (2) C14—H14B 0.9900
N2—C14 1.501 (3) C15—C16 1.529 (3)
N2—H1N 0.882 (10) C15—H15A 0.9900
N2—H2N 0.879 (10) C15—H15B 0.9900
C1—C2 1.404 (3) C16—C17 1.527 (3)
C1—C10 1.510 (3) C16—H16A 0.9900
C2—C3 1.372 (3) C16—H16B 0.9900
C2—H2 0.9500 C17—H17A 0.9900
C3—C4 1.428 (3) C17—H17B 0.9900
C3—C12 1.518 (3) Cl1—C19 1.766 (2)
C4—C9 1.428 (3) Cl2—C19 1.759 (2)
C4—C5 1.423 (3) Cl3—C19 1.784 (2)
C5—C6 1.361 (3) O2—C18 1.238 (3)
C5—H5 0.9500 O3—C18 1.245 (3)
C6—C7 1.413 (3) C18—C19 1.562 (3)
C6—H6 0.9500
C12—O1—H1O 110 (2) F6—C11—C8 111.3 (2)
C1—N1—C9 116.91 (17) O1—C12—C3 112.85 (16)
C13—N2—C14 113.36 (16) O1—C12—C13 105.73 (16)
C13—N2—H1N 110.4 (15) C3—C12—C13 110.13 (16)
C14—N2—H1N 108.4 (16) O1—C12—H12 109.3
C13—N2—H2N 110.7 (16) C3—C12—H12 109.3
C14—N2—H2N 109.4 (16) C13—C12—H12 109.3
H1N—N2—H2N 104 (2) N2—C13—C17 108.72 (16)
N1—C1—C2 125.37 (19) N2—C13—C12 107.06 (16)
N1—C1—C10 115.36 (18) C17—C13—C12 115.11 (17)
C2—C1—C10 119.01 (18) N2—C13—H13 108.6
C3—C2—C1 119.12 (19) C17—C13—H13 108.6
C3—C2—H2 120.4 C12—C13—H13 108.6
C1—C2—H2 120.4 N2—C14—C15 109.75 (17)
C2—C3—C4 118.17 (18) N2—C14—H14A 109.7
C2—C3—C12 119.94 (18) C15—C14—H14A 109.7
C4—C3—C12 121.84 (17) N2—C14—H14B 109.7
C9—C4—C5 118.59 (18) C15—C14—H14B 109.7
C9—C4—C3 117.62 (18) H14A—C14—H14B 108.2
C5—C4—C3 123.78 (18) C14—C15—C16 111.18 (18)
C6—C5—C4 120.7 (2) C14—C15—H15A 109.4
C6—C5—H5 119.6 C16—C15—H15A 109.4
C4—C5—H5 119.6 C14—C15—H15B 109.4
C5—C6—C7 121.0 (2) C16—C15—H15B 109.4
C5—C6—H6 119.5 H15A—C15—H15B 108.0
C7—C6—H6 119.5 C17—C16—C15 110.84 (18)
C8—C7—C6 120.3 (2) C17—C16—H16A 109.5
C8—C7—H7 119.9 C15—C16—H16A 109.5
C6—C7—H7 119.9 C17—C16—H16B 109.5
C7—C8—C9 120.4 (2) C15—C16—H16B 109.5
C7—C8—C11 120.5 (2) H16A—C16—H16B 108.1
C9—C8—C11 119.1 (2) C13—C17—C16 110.83 (18)
N1—C9—C4 122.80 (18) C13—C17—H17A 109.5
N1—C9—C8 118.09 (18) C16—C17—H17A 109.5
C4—C9—C8 119.07 (19) C13—C17—H17B 109.5
F3—C10—F1 106.88 (17) C16—C17—H17B 109.5
F3—C10—F2 107.34 (17) H17A—C17—H17B 108.1
F1—C10—F2 106.53 (17) O2—C18—O3 127.3 (2)
F3—C10—C1 113.66 (18) O2—C18—C19 116.35 (19)
F1—C10—C1 110.42 (16) O3—C18—C19 116.19 (18)
F2—C10—C1 111.64 (17) C18—C19—Cl2 111.80 (15)
F5—C11—F4 106.7 (2) C18—C19—Cl1 111.57 (15)
F5—C11—F6 106.71 (19) Cl2—C19—Cl1 108.50 (12)
F4—C11—F6 105.65 (19) C18—C19—Cl3 105.96 (14)
F5—C11—C8 113.08 (19) Cl2—C19—Cl3 110.39 (13)
F4—C11—C8 112.85 (19) Cl1—C19—Cl3 108.56 (12)
C9—N1—C1—C2 −0.6 (3) N1—C1—C10—F2 154.97 (17)
C9—N1—C1—C10 173.54 (17) C2—C1—C10—F2 −30.5 (3)
N1—C1—C2—C3 1.3 (3) C7—C8—C11—F5 120.8 (2)
C10—C1—C2—C3 −172.61 (18) C9—C8—C11—F5 −60.6 (3)
C1—C2—C3—C4 −0.9 (3) C7—C8—C11—F4 −118.0 (2)
C1—C2—C3—C12 176.57 (18) C9—C8—C11—F4 60.7 (3)
C2—C3—C4—C9 −0.1 (3) C7—C8—C11—F6 0.7 (3)
C12—C3—C4—C9 −177.48 (17) C9—C8—C11—F6 179.31 (19)
C2—C3—C4—C5 179.01 (19) C2—C3—C12—O1 19.3 (3)
C12—C3—C4—C5 1.6 (3) C4—C3—C12—O1 −163.38 (17)
C9—C4—C5—C6 1.0 (3) C2—C3—C12—C13 −98.6 (2)
C3—C4—C5—C6 −178.1 (2) C4—C3—C12—C13 78.7 (2)
C4—C5—C6—C7 −0.4 (3) C14—N2—C13—C17 −58.8 (2)
C5—C6—C7—C8 −0.6 (3) C14—N2—C13—C12 176.26 (16)
C6—C7—C8—C9 1.0 (3) O1—C12—C13—N2 58.90 (19)
C6—C7—C8—C11 179.6 (2) C3—C12—C13—N2 −178.90 (15)
C1—N1—C9—C4 −0.5 (3) O1—C12—C13—C17 −62.1 (2)
C1—N1—C9—C8 −178.23 (18) C3—C12—C13—C17 60.1 (2)
C5—C4—C9—N1 −178.32 (18) C13—N2—C14—C15 57.8 (2)
C3—C4—C9—N1 0.8 (3) N2—C14—C15—C16 −54.6 (2)
C5—C4—C9—C8 −0.6 (3) C14—C15—C16—C17 55.1 (2)
C3—C4—C9—C8 178.53 (18) N2—C13—C17—C16 57.1 (2)
C7—C8—C9—N1 177.45 (19) C12—C13—C17—C16 177.17 (17)
C11—C8—C9—N1 −1.2 (3) C15—C16—C17—C13 −56.5 (2)
C7—C8—C9—C4 −0.4 (3) O2—C18—C19—Cl2 −159.24 (16)
C11—C8—C9—C4 −179.02 (19) O3—C18—C19—Cl2 25.0 (2)
N1—C1—C10—F3 33.4 (2) O2—C18—C19—Cl1 −37.5 (2)
C2—C1—C10—F3 −152.12 (18) O3—C18—C19—Cl1 146.68 (16)
N1—C1—C10—F1 −86.7 (2) O2—C18—C19—Cl3 80.4 (2)
C2—C1—C10—F1 87.8 (2) O3—C18—C19—Cl3 −95.35 (19)

Hydrogen-bond geometry (Å, º)

Cg1 and Cg2 are the centroids of the C4–C9 and N1/C1–C4/C9 rings, respectively.

D—H···A D—H H···A D···A D—H···A
N2—H1N···O1 0.88 (2) 2.42 (2) 2.734 (3) 102 (2)
N2—H1N···O2i 0.88 (2) 1.99 (2) 2.769 (3) 146 (2)
O1—H1O···O3ii 0.83 (2) 1.89 (2) 2.702 (2) 165 (2)
N2—H2N···O2 0.88 (2) 2.00 (2) 2.869 (2) 173 (2)
N2—H2N···O3 0.88 (2) 2.47 (2) 3.043 (3) 124 (1)
C19—Cl3···Cg1iii 1.78 (1) 3.61 (1) 4.709 (3) 118 (1)
C10—F1···Cg2iv 1.34 (1) 3.07 (1) 4.395 (2) 171 (1)
C10—F2···Cg1ii 1.34 (1) 3.44 (1) 3.788 (2) 95 (1)
C10—F3···Cg1ii 1.32 (1) 3.24 (1) 3.788 (2) 104 (1)

Symmetry codes: (i) −x+1, −y, −z+1; (ii) x−1, y, z; (iii) −x+1, −y+1, −z+1; (iv) −x, −y, −z+2.

Funding Statement

This work was funded by Conselho Nacional de Desenvolvimento Científico e Tecnológico grant support to J. L. Wardell.

References

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Associated Data

This section collects any data citations, data availability statements, or supplementary materials included in this article.

Supplementary Materials

Crystal structure: contains datablock(s) I, global. DOI: 10.1107/S2056989018016389/hb7786sup1.cif

e-74-01851-sup1.cif (790.9KB, cif)

Structure factors: contains datablock(s) I. DOI: 10.1107/S2056989018016389/hb7786Isup2.hkl

e-74-01851-Isup2.hkl (406.9KB, hkl)

CCDC reference: 1879700

Additional supporting information: crystallographic information; 3D view; checkCIF report


Articles from Acta Crystallographica Section E: Crystallographic Communications are provided here courtesy of International Union of Crystallography

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