Abstract
Introduction
Stored red blood cells (RBCs) undergo storage lesions involving morphological, physiological and biochemical changes. MicroRNAs (miRNAs) have important functions in cell apoptosis and life processes. Therefore, the aim of this study was to explore potential roles of miRNAs in the damage of stored RBCs.
Methods
Blood samples were collected from 13 healthy male O-type donors, and leuko-reduced RBCs were divided into fresh RBC group and 20-day storage RBC group.
Results
Eight predicted miRNAs with modified expressions with an intersection ≥ 3 were found dysregulated in the 20-day storage RBC group and involved in apoptosis and senescence signaling pathway: miR-31-5p, miR-196a-5p, miR-203a, miR-654-3p and miR-769-3p were increased, while miR-96-5P, miR-150-5P and miR-197-3p were decreased. Evidence associating miR-31-5p, miR-203a, miR-654 and miR-769 to RBCs or blood in general are not available.
Conclusions
Dysregulated miRNAs might represent potential biomarkers to identify storage lesions, and their detection might help to evaluate the quality of stored RBCs.
Keywords: Stored RBCs, miRNA dysregulation, Storage lesion, Hemorheology
Introduction
Biochemical changes of stored red blood cells (RBCs) may occur during storage, even under approved conditions set by regulatory agencies. These alterations of stored RBCs, known as storage lesions, are primarily divided into three types: biochemical, morphological, and structural [1, 2]. During storage, RBC alterations may result in their easy disruption during transfusion, which could be harmful to the transfusion recipient [1, 3, 4, 5]. In addition, previous studies demonstrate that RBC alterations may be of crucial importance for the maintenance of normal circulation [6, 7, 8, 9, 10, 11].
MicroRNAs (miRNAs) are known to regulate the expression of genes that are especially relevant in differentiation and apoptosis via mRNA degradation or translation inhibition. miRNAs have also been implicated in many human diseases, and the resulting altered cellular states can be used as biomarkers [12, 13, 14]. As cells differentiate into reticulocytes, the nuclei are extruded, and cytoplasmic RNAs (including mRNAs and miRNAs) and translation activities remain detectable [15]. Diverse and abundant miRNAs exist in mature erythrocytes, but their functions are still unknown [16]. miRNA expression in erythrocytes is different from that found in reticulocytes or leukocytes. Nucleated cells had substantially higher miRNA content on a per cell basis, but the hematopoietic cellular contribution to miRNA content of blood on a volume basis is highest in erythrocytes [17]. Therefore, these miRNAs likely play a significant role in posttranscriptional regulation in erythroid cells [16, 18, 19]. Profiling studies on RBCs have reported that the expression of several miRNAs can dramatically change during storage, and among them apoptosis-associated miRNAs have been identified in whole blood [18].
In this study, we performed miRNA microarrays in both fresh and 20-day storage RBCs washed and leuko-reduced to evaluate potential dysregulated miRNAs in 20-day storage RBCs. Subsequently, miRNA target gene prediction was performed by the overlap of Miranda, Microcosm, and TargetScan databases with intersections ≥ 3.
Material and Methods
Ethics Approval and Consent to Participate
All procedures performed in this study involving human participants were in accordance with the ethical standards of the Guangzhou First People's Hospital and the 1964 Helsinki declaration and its later amendments or comparable ethical standards. All participants in this study provided their written informed consent, data were kept anonymous, and this consent was approved by the Guangzhou First People's Hospital Ethics Committees consistent with the Article 15 of the Declaration of Helsinki (2008) on human subjects study.
Blood Sample Collection and Groups
Blood from 13 healthy adult male volunteers (aged 20–38 years, blood group O) was collected in blood polyvinyl chloride plastic bags containing anticoagulant citrate dextrose solution A (ACD-A, Fresenius Kabi, Guangzhou, China) and stored in the anticoagulant citrate phosphate dextrose adenine solution (CPDA-1, Fresenius Kabi, Guangzhou, China). Each suspension was divided into 2 halves, one half was used for the analysis of fresh RBCs (fresh RBC group), and the other half was stored for 20 days at 4 °C as 20-day storage RBC group. The choice of analyzing stored RBCs after 20 days is due to the fact that in Guangzhou First People's Hospital the stored blood is used for transfusion after more or less 3 weeks after collection, with an average storage time of 20 days, which actually represents half of the maximum storage period approved by US Food and Drug Administration [20].
RBC Purification
Suspended fresh RBCs were leuko-reduced prior to storage using a leukocyte depletion filter (Haemonetics Manufacturing Inc, Covina, CA, USA) from 4.98 ± 1.79 × 109/l to 1.68 ± 0.41 × 106/l to minimize potential leukocyte contamination. A total of 4.40 × 1012/l RBCs in each sample were tested. RBCs were additionally purified by washing them with 0.9% NaCl and centrifuged three times at 1,400 × g for 6 min to remove any platelet contamination.
RNA Extraction
Isolated RBCs were stored in RNAlater (Life Technologies, Carlsbad, CA, USA) at −20 °C after their collection to avoid technical bias. Total RNA was extracted from both fresh RBCs and 20-day storage RBCs using TRIzol-LS (Invitrogen, Carlsbad, CA, USA), and both mRNA and miRNA were isolated using the miRNeasy mini kit (Qiagen, Shanghai, China) according to the manufacturers' instructions. RNA quality was evaluated using the spectrophotometer NanoDrop ND-1000 (Nanodrop Technologies, Wilmington, DE, USA).
miRNA Microarray and Data Analysis
miRNA expression profiling was performed by Kangchen Services Company (Shanghai, China) in both the fresh RBC groupand the 20-day storage RBC group. Samples were labeled using miRCURY Hy3/Hy5 Power Labeling Kit (Exiqon, Vedbaek, Denmark) and hybridized on a miRCURY LNA Array version 18.0 (Exiqon). After washing, slides were scanned using an Axon GenePix 4000B microarray scanner (Axon Instruments, Foster City, CA, USA). Scanned images were imported into GenePix Pro 6.0 software (Axon) for grid alignment and data extraction. Replicated miRNAs were averaged, and miRNAs with an intensity ≥ 30 in all samples were included in the calculation of a normalization factor. Expressed data were normalized using the median normalization. After normalization, significantly differentially expressed miRNAs were identified through volcano plot filtering. The threshold used to screen increased or decreased miRNAs was a fold change ≥ 2.0 and a p value ≤ 0.05. Finally, hierarchical clustering was performed using MEV software version 4.6 (TIGR) to show distinguishable miRNA expression profiling among samples. All data can be accessed at www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE86905, the series record number is GSE86905. miRNAs selected for subsequent investigation were further filtered on the basis of expression levels and previously published data [16, 18].
cDNA Synthesis of Mature miRNAs
After RNA quantification, cDNA conversion for miRNA quantification was performed using Universal cDNA Synthesis Kit II (Exiqon). For each sample, cDNA was produced from 25 ng of total RNA, according to a standard protocol. The mixture was incubated at 42 °C for 60 min, 95 °C for 5 min, cooled to 4 °C, and stored at −20 °C. Subsequently, cDNA was diluted 40× with RNase-free water prior to quantification by qRT-PCR.
miRNAs qRT-PCR
qRT-PCR was performed using a ViiA 7 real-time PCR machine (Applied Biosystems, Foster City, CA, USA), 96-well microtiter plates, and MicroAmP Fast Reaction Tubes. For miRNA quantification, an ExiLENT SYBR Green Master Mix Kit (Exiqon) was used in combination with miRCURY LNA PCR Primers (Exiqon). Primers were purchased from Takara (Takara Bio. Inc., Dalian, China), and their details are shown in supplemental table 1 (available at http://content.karger.com/ProdukteDB/produkte.asp?doi=489321).
Each reaction was performed in triplicate at a final volume of 10 µl per well using the passive reference dye ROX II. The reaction conditions consisted of polymerase activation or denaturation and well-factor determination at 95 °C for 10 min, followed by 40 amplification cycles at 95 °C for 10 s and 60 °C for 1 min, with a ramp rate of 1.6 °C/s. The melting curve protocol began immediately after amplification and consisted of 65 °C and 98 °C, with a 0.2 °C increase at each step. CT values were determined using a manual baseline, and the mean CT was determined from the triplicate PCR results. The relative expression of each gene was calculated using comparative CT (2−△△CT) method. U6 snRNA was used as an internal control, and its expression stability was tested in RBCs.
Target Genes Prediction
miRNA target gene predictions were refined using Miranda (www.microrna.org/microrna/getGeneForm.do), Microcosm (www.ebi.ac.uk/enright-srv/microcosm/cgi-bin/targets/v5/search.pl), and TargetScan (www.targetscan.org/vert_61/) databases, which can efficiently provide information on miRNA sequences and target genes. The results obtained by different search programs were compared to find the common results. Thus, more intersections using more search programs correspond to more reliable results. Therefore, the final results were obtained by the overlap of the three databases with intersections ≥ 3, ≥ 2, ≥ 1, based on the protocol and PCR panels from Qiagen (www.sabiosciences.com/ArrayList.php?pline= PCRArray). Subsequently, enrichment analysis of the selected miRNAs and their predicted target genes was performed through KEGG pathways database (www.genome.jp/kegg/) to identify the miRNA-mRNA regulatory relationships. Finally, data were compiled and manually evaluated to identify individual miRNAs that target RBC apoptosis-, senescence- and membrane-related genes (mRNA).
mRNA Expression Levels
cDNA conversion for mRNA quantification was performed using PrimeScript RT Reagent Kit (Takara Bio. Inc). SYBR® Premix Ex Taq (Takara Bio. Inc) was used for qRT-PCR. Genes were selected according to the most significant results obtained by KEGG on miRNA-mRNA. Pairs of appropriate forward and reverse primers used (Takara Bio. Inc.) are shown in supplemental table 2 (available at http://content.karger.com/ProdukteDB/produkte.asp?doi=489321)
In brief, mRNA was first reverse-transcribed into cDNA using reverse primers in a thermal cycler at 37 °C for 15 min and 85 °C for 5 s; samples were then cooled to 4 °C and stored at −20 °C until further use. Subsequently, cDNA (2 µl) was amplified by PCR using the above primers. Each reaction was performed in triplicate at a final volume of 20 µl per well using the passive reference dye ROX II; the fluorescence collection point was set to 60 °C. Reaction conditions consisted of polymerase activation/denaturation and well-factor determination at 95 °C for 30 s, followed by 40 amplification cycles at 95 °C for 3 s, 60 °C for 30 s and 95 °C for 15 s. The melting curve protocol began immediately after amplification and consisted of heating at 95 °C for 15 s and 60 °C for 60 s. Relative expression of each gene was calculated according to the comparative 2−ΔΔCT method using GAPDH as internal reference, where ΔCT = CT (target gene) - CT (GAPDH) and ΔΔCT = ΔCT (sample) - ΔCT (control). Data are presented as fold change of each mRNA.
Statistical Analysis
Data are shown as mean ± SD. Statistical analysis was performed using SPSS software version 13.0 (IBM, Armonk, NY, USA). Univariate and paired-sample Student's t-test was used to assess statistical significance between fresh RBC group and 20-day storage RBC group. Residual error was used to test the normality. Post-hoc multiple comparisons test (LSD t test) was performed, where appropriate. Statistical significance was set at p < 0.05.
Results
miRNAs Expression Profiles in 20-Day Storage RBC Group
To define the differential expression profile of miRNA in RBCs during storage, set of miRNAs expressed in the 20-day storage RBC group were compared to those of fresh RBC group. Supplemental figure 1 (available at http://content.karger.com/ProdukteDB/produkte.asp?doi=489321) shows the heat map and hierarchical clustering (n = 3, representative of the results for all the 13 donors) between 20-day storage RBC group and fresh RBC group. The results revealed that 211 miRNAs were dysregulated in a total of 3,100 miRNAs, divided into 109 increased and 102 decreased miRNAs. Table 1 shows the 10 miRNAs with the highest/lowest level in the 20-day storage RBC group.
Table 1.
miRNA | 20-day storage RBCs group vs fresh RBCs group |
|
---|---|---|
fold change | p value | |
Increased | ||
hsa-miR-203a | 16.15 ± 7.25 | 0.022 |
hsa-miR-654-3p | 14.30 ± 5.63 | 0.003 |
hsa-miR-31-5p | 12.68 ± 6.26 | 0.040 |
hsa-miR-769-3p | 11.01 ± 1.84 | 0.006 |
hsa-let-7d-3p | 9.70 ± 4.30 | 0.001 |
hsa-miR-4740-5p | 9.26 ± 12.3 | 0.041 |
hsv1-miR-H5-5p | 7.22 ± 3.38 | 0.013 |
hsa-miR-642b-3p | 6.52 ± 1.45 | 0.022 |
ebv-miR-BART6-3p | 6.26 ± 3.00 | 0.019 |
hsa-miR-506-5p | 5.30 ± 2.90 | 0.043 |
Decreased | ||
hsa-miR-5692c | 0.02 ± 0.05 | 0.006 |
hsa-miR-145-3p | 0.02 ± 0.02 | 0.032 |
hsa-miR-299-3p | 0.03 ± 0.02 | 0.001 |
hsa-miR-4682 | 0.03 ± 0.04 | 0.003 |
hsa-miR-3129-5p | 0.04 ± 0.02 | 0.008 |
hsa-miR-100-5p | 0.04 ± 0.01 | 0.011 |
hsa-miR-944 | 0.04 ± 0.02 | 0.003 |
hsa-miR-3591-5p | 0.05 ± 0.11 | 0.012 |
hsa-miR-676-3p | 0.07 ± 0.05 | 0.014 |
hsa-miR-4777-5p | 0.07 ± 0.03 | 0.012 |
Target Genes Prediction
The final results obtained by the overlap of Miranda, Microcosm and TargetScan databases used for miRNA target gene predictions with intersections ≥ 3, ≥ 2, ≥ 1 are shown in table 2. With an intersection ≥ 3, 8 miRNAs and 352 mRNAs were found to be involved in miRNA-mRNA networks while with an intersection ≥ 2, 10 miRNAs and 5,104 mRNAs were found (table 2). In addition, enrichment analysis showed that these miRNAs were involved in 50 or 75 signaling pathways, including apoptosis, senescence and RBC differentiation pathways (data not shown).
Table 2.
miRNA | Miranda | Microcosm (mirbase) | Targetscan | Summary | Intersection (≥3) | Intersection (≥2) | Intersection (≥1) |
---|---|---|---|---|---|---|---|
miR-31-5p | 3,698 | 955 | 368 | 3,259 | 31 | 497 | 2,762 |
miR-196a-5p | 2,783 | 1,149 | 807 | 2,827 | 44 | 405 | 2,422 |
miR-203a | 8,936 | 902 | 868 | 5,849 | 88 | 987 | 4,862 |
miR-654-3p | 3,854 | 947 | 164 | 3,381 | 8 | 367 | 3,014 |
miR-769-3p | 2,534 | 1,276 | 103 | 2,658 | 11 | 246 | 2,412 |
miR-96-5P | 3,785 | 1,113 | 1,048 | 3,700 | 112 | 826 | 2,874 |
miR-150-5P | 3,880 | 835 | 275 | 3,261 | 44 | 401 | 2,860 |
miR-197-3p | 3,115 | 916 | 0 | 2,893 | 14 | 314 | 2,579 |
miR-3129-5p | 3,671 | 0 | 401 | 2,730 | 0 | 309 | 2,421 |
miR-145-3p | 3,627 | 887 | 0 | 3,040 | 0 | 207 | 2,833 |
miR-5692c | 0 | 0 | 0 | 0 | 0 | 0 | 0 |
Validation of Selected miRNAs by qRT-PCR
The eight predicted miRNAs with an intersection ≥ 3 were evaluated by qRT-PCR. miR-31-5p, miR-196a-5p, miR-203a, miR-654-3p and miR-769-3p were increased, while miR-96-5P, miR-150-5P and miR-197-3p were decreased (table 3).
Table 3.
miRNA | 20-day storage RBCs group vs. fresh RBCs group |
|
---|---|---|
fold change | p value | |
Increased | ||
miR-31-5p | 1.86 ± 0.64 | 0.040 |
miR-196a-5p | 3.44 ± 1.89 | 0.044 |
miR-203a | 2.72 ± 1.06 | 0.022 |
miR-654-3p | 2.97 ± 0.65 | 0.003 |
miR-769-3p | 3.94 ± 1.23 | 0.006 |
Decreased | ||
miR-96-5p | 0.19 ± 0.16 | 0.0001 |
miR-150-5p | 0.35 ± 0.14 | 0.013 |
miR-197-3p | 0.21 ± 0.18 | 0.001 |
Target mRNAs Validated by qRT-PCR
Target gene mRNAs were evaluated according to miRNA changes in our results related to the intersection ≥ 3 shown in table 2 (supplemental table 3, available at http://content.karger.com/ProdukteDB/produkte.asp?doi=489321).
Among the many target mRNAs listed in supplemental table 3 (available at http://content.karger.com/ProdukteDB/produkte.asp?doi=489321), 9 were chosen for further analysis based on the intersection ≥ 2 by KEGG and associated with apoptosis and senescence (supplemental table 4, available at http://content.karger.com/ProdukteDB/produkte.asp?doi=489321).
Our results showed that BTG Family Member 2 (BTG2) was increased in the 20-day storage RBC group, while Rapamycin-Insensitive Companion of mTOR (RICTOR), serine/threonine kinase (ATM), caspase 10 (CASP10), caspase 8 (CASP8), interleukin 3 (IL3), Baculoviral IAP Repeat-Containing 6 (BIRC6), Mitogen-Activated Protein Kinase 14 (MAP3K14) and Erythrocyte Membrane Protein Band 4.1-like 4B (EPB41L4B) were decreased in the 20-day storage RBCs group (supplemental table 4, available at http://content.karger.com/ProdukteDB/produkte.asp?doi=489321). These mRNAs belong to 3 groups related to apoptosis, senescence, and RBC membrane, as follows: i) BIRC6, RICTOR, CASP8, CASP10, BTG2, IL3, ATM, and MAP3K1 are apoptotic-related genes in RBCs, and CASP8, CASP10, IL3, ATM, and MAP3K14 are involved in the apoptotic signaling pathways in KEGG; ii) ATM is a RBC senescence-related gene; iii) EPB41L4B is an RBC membrane-related gene. However, in our qRT-PCR confirmation, only RICTOR, CASP8, and CASP10 were found to be significantly changed, despite all these 9 genes we considered were significantly dysregulated according to KEGG.
Discussion and Conclusion
RBCs may be stored up to 35 days before transfusion according to Chinese standards and up to 42 days according to US and EU standards [20, 21, 22]. Although there are evidences reporting the potential harm of transfusing stored RBCs [1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11], other studies on randomized clinical trials reported no difference in mortality of patients who received fresher versus older RBCs [23, 24, 25, 26]. Most published clinical studies are non-randomized observational studies with methodologic limitations. Therefore, according to these evidences, it is still difficult to evaluate the positive or negative clinical impact of using stored RBCs on patients [22, 27, 28]. Actually, stored RBCs undergo slow deleterious changes over time during storage, decreasing their viability at 24 h post-transfusion to 70% in the 35 days stored RBCs [29], although these stored RBCs still meet the storage level accepted by several countries [20, 21, 22]. Despite more attention is now being paid to the storage damage found in banked RBCs, further studies are needed to increase our knowledge on RBC storage modifications to evaluate their potential consequences. miRNAs are endogenous non-coding small single RNAs molecules that play important roles in several life processes including cell apoptosis, differentiation, and proliferation. Therefore, we believe that miRNA changes in stored RBCs may represent potential biomarkers of storage lesions.
miRNAs present in mature RBCs are more abundant compared to the amount present in other blood cells, including leukocytes and platelets [16, 18, 19]. Thus, although the presence of other blood cells should not influence the results associated to miRNA, we performed our study on leuko-reduced RBCs in accordance to the rule followed by Guangzhou First People's Hospital of using leuko-reduced RBCs for transfusion and the consequent need of establishing storage lesions in these leuko-reduced samples. Kannan and Atreya [18] reported that miR-96, miR-150, and miR-197 increased in RBCs during 20 days of storage, which is opposite to the decreased levels we found. The main reason might be associated to the difference in samples used, since we used leuko-reduced RBCs, while Kannan and Atreya [18] used non-leuko-reduced whole blood. Although on the basis of our results we could not explain how exactly this difference in samples used could result in different results obtained, the fact that Kannan and Atreya [18] used blood samples differing from those we used could not be ignored and should be considered when comparing our results to those of Kannan and Atreya [18]. However, both our results and those of Kannan and Atreya [18] showed dysregulation of miR-96, miR-150, and miR-197, even though with opposite trend; thus we provided an additional evidence that these three miRNA are sensible to storage.
Our results revealed that 211 miRNAs were dysregulated in the 20-day storage RBC group compared to the fresh RBC group, and through the intersection ≥ 3 we highlighted that 8 of them were significantly dysregulated. The role of these dysregulated miRNAs in RBCs is not yet known for all of them. miRNA-150 is one of the most extensively studied miRNAs, revealing multiple roles in both blood cells and other cells types. In addition, it is also a tumor suppressor, since its decrease induces activation of specific pathways leading to immortalization of cancer cells and malignant lymphoma [30]. Importantly, Zhang et al. [31] demonstrated that miRNA-150 secreted by human blood cells can increase HMEC-1 cell migration after being delivered into these cells, suggesting that miRNA-150, and miRNAs in general, can be secreted by cells and can be delivered into other cells, consequently influencing the recipient cell function. Thus, our result on miRNA-150 in stored RBCs could not be significantly related to RBC health status per se.
miRNA-96 is known for its abundance in adult blood reticulocytes, where it decreases γ-globin expression typical of fetal hemoglobin (α2γ2) allowing for the predominance of adult hemoglobin (α2β2) when reticulocytes mature into erythrocytes [32, 33]. As a consequence of that, miRNA-96 silencing induces an increase in γ-globin [32, 33]. In addition, overexpression of miRNA-96-5p inhibits autophagy and apoptosis in human breast cancer cells [34]. Thus, although our results are referred to RBCs, this evidence could indicate that miRNA-96 decrease might be a sign of ongoing RBC autophagy and apoptosis.
Both miRNA-197 and miRNA-96 are associated with increased systolic blood pressure and mean arterial pressure [35], suggesting that the decrease of both miRNA as shown in our study could result in reduced blood pressure. In addition, increased miR-196a in stem cells is associated with increased senescence [36]. Although not directly referred to RBCs, these evidence cannot be ignored, since it reveals an involvement of this miRNA in senescence pathways.
Little is known about the role of miR-31-5p, miR-203a, miR-654-3p and miR-769-3p in RBCs or in blood in general. However, evidence related to their role in other cell types could be an indication to understand their potential effect when increasing in RBCs. miR-31-5p is increased in aging endothelial cells isolated from umbilical cords, and it is considered as a human liver aging marker since it increases in livers of old age donors [37, 38]. A recent study shows that miR-203a induces apoptosis in human scar fibroblasts [39]. miR-654-3p overexpression induced in human prostate cancer cells and tumor thyroid cells increases the percentage of apoptotic cells, but it also increases apoptosis in normal thyroid cells [40, 41]. Overexpression of miR-769-3p in breast cancer cells increases apoptosis; thus, it could be also critical in RBC survival [42]. These reports shed light on the involvement of those miRNAs in apoptosis and senescence signaling pathways.
Only little is known on the half-life of miRNA in RBCs and other cell types. Van Rooij et al. [43] reported a miRNA half-life of up to 12 days in cardiac cells; Both Chen et al. [44] and Wang et al. [45] reported longer half-life and slower decay kinetics of specific miRNAs in erythrocytes, although they do not mention the length of their half-life; Heneghan et al. [46] reported that the half-life of tumor-associated miRNAs in the blood is undefined. With respect to these results, miRNAs could accumulate during maturation from reticulocytes to mature RBCs, and this accumulation could also persist for a while during storage and might be perceived as an increase. However, nucleic acids and proteins may undergo degradation due to the physiological stress during RBC storage, depending on their individual half-life [18]. Furthermore, Said et al. [47] identified RBC-derived miRNAs packaged into nano- or microparticles that are shed into the supernatant from senescent and damaged RBCs. Thus, this might also contribute to decreased miRNA levels in stored RBCs. On the other hand, transfusion of miRNA-containing particles could potentially have biological implications. These events could also explain the increase we observed in some miRNAs and the decrease in some others.
Target gene mRNAs were evaluated according to miRNAs changes, and, among the many target mRNAs, the eight most significant results obtained by KEGG were selected according to their involvement in apoptosis, cellular senescence, and RBC membrane pathways. Although only RICTOR, CASP10, and CASP8 expressions were significantly decreased, we could show for the first time that their decrease in stored RBCs is actually associated with apoptosis. Indeed, CASP8 and CASP10 are pro-apoptotic. RICTOR on the other hand is a key regulator of the mTOR signaling pathway, and it can induce eNOS activity and release NO level by eNOS phosphorylation; its expression inhibits apoptosis of endothelial cells induced by TNF [26, 48]. On the basis of these gene functions, our results suggest that miRNA dysregulation might influence miRNA-mRNA interaction, confirming once more the role of miRNAs in RBC storage lesion and suggesting that miRNAs in RBCs represent potential apoptotic markers.
In conclusion, our work highlighted the dysregulation of miRNAs which have not been reported before in stored RBCs, suggesting that miRNAs might play a role in storage lesion. Thus, those dysregulated miRNAs identified in the 20-day storage RBC group might be considered as storage lesion biomarkers and might be useful to predict the quality of stored RBCs.
Funding
This work was supported by the National Natural Science Foundation of China (#81070385), and Guangzhou Planned Project of Science and Technology (#201300000100).
Disclosure Statement
The authors declare no conflict of interests.
Supplementary Material
Acknowledgments
This manuscript underwent English language editing and proofreading offered by Mogo Internet Technology Co., LTD.
References
- 1.Bennett-Guerrero E, Veldman TH, Doctor A, Telen MJ, Ortel TL, Reid TS, Mulherin MA, Zhu H, Buck RD, Califf RM, McMahon TJ. Evolution of adverse changes in stored RBCs. Proc Natl Acad Sci U S A. 2007;104:17063–17068. doi: 10.1073/pnas.0708160104. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 2.Glynn SA. The red blood cell storage lesion: a method to the madness. Transfusion. 2010;50:1164–1169. doi: 10.1111/j.1537-2995.2010.02674.x. [DOI] [PubMed] [Google Scholar]
- 3.Henkelman S, Dijkstra-Tiekstra MJ, de Wildt-Eggen J, Graaff R, Rakhorst G, van Oeveren W. Is red blood cell rheology preserved during routine blood bank storage? Transfusion. 2010;50:941–948. doi: 10.1111/j.1537-2995.2009.02521.x. [DOI] [PubMed] [Google Scholar]
- 4.Reynolds JD, Ahearn GS, Angelo M, Zhang J, Cobb F, Stamler JS. S-nitrosohemoglobin deficiency: a mechanism for loss of physiological activity in banked blood. Proc Natl Acad Sci U S A. 2007;104:17058–17062. doi: 10.1073/pnas.0707958104. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 5.Xu Z, Zheng Y, Wang X, Shehata N, Wang C, Sun Y. Stiffness increase of red blood cells during storage. Microsystems Nanoengineering. 2018;4:17103–17108. [Google Scholar]
- 6.Chien S. Red cell deformability and its relevance to blood flow. Annu Rev Physiol. 1987;49:177–192. doi: 10.1146/annurev.ph.49.030187.001141. [DOI] [PubMed] [Google Scholar]
- 7.Parthasarathi K, Lipowsky HH. Capillary recruitment in response to tissue hypoxia and its dependence on red blood cell deformability. Am J Physiol. 1999;277:H2145–2157. doi: 10.1152/ajpheart.1999.277.6.H2145. [DOI] [PubMed] [Google Scholar]
- 8.Rao SV, Jollis JG, Harrington RA, Granger CB, Newby LK, Armstrong PW, Moliterno DJ, Lindblad L, Pieper K, Topol EJ, Stamler JS, Califf RM. Relationship of blood transfusion and clinical outcomes in patients with acute coronary syndromes. JAMA. 2004;292:1555–1562. doi: 10.1001/jama.292.13.1555. [DOI] [PubMed] [Google Scholar]
- 9.Tinmouth A, Fergusson D, Yee IC, Hebert PC. Clinical consequences of red cell storage in the critically ill. Transfusion. 2006;46:2014–2027. doi: 10.1111/j.1537-2995.2006.01026.x. [DOI] [PubMed] [Google Scholar]
- 10.Xie X, Yao H, Yang X, Wei Y. Effects of SNP on hemorheology and nitric oxide levels in stored erythrocyte. Chin J Blood Transfus. 2014;27:136–139. [Google Scholar]
- 11.Xing Y, Wu Q, Xie X, Cui Y, Yuan Z, Yang X, Wei Y. Alteration of NO and ATP level in stored RBC incubated with SNP at 37 °C. Chin J Blood Transfus. 2016;29:791–794. [Google Scholar]
- 12.Bartel DP. MicroRNAs: genomics, biogenesis, mechanism, and function. Cell. 2004;116:281–297. doi: 10.1016/s0092-8674(04)00045-5. [DOI] [PubMed] [Google Scholar]
- 13.Chen X, Ba Y, Ma L, Cai X, Yin Y, Wang K, Guo J, Zhang Y, Chen J, Guo X, Li Q, Li X, Wang W, Wang J, Jiang X, Xiang Y, Xu C, Zheng P, Zhang J, Li R, Zhang H, Shang X, Gong T, Ning G, Zen K, Zhang CY. Characterization of microRNAs in serum: a novel class of biomarkers for diagnosis of cancer and other diseases. Cell Res. 2008;18:997–1006. doi: 10.1038/cr.2008.282. [DOI] [PubMed] [Google Scholar]
- 14.Lim LP, Lau NC, Garrett-Engele P, Grimson A, Schelter JM, Castle J, Bartel DP, Linsley PS, Johnson JM. Microarray analysis shows that some microRNAs downregulate large numbers of target mRNAs. Nature. 2005;433:769–773. doi: 10.1038/nature03315. [DOI] [PubMed] [Google Scholar]
- 15.Goh SH, Lee YT, Bouffard GG, Miller JL. Hembase: browser and genome portal for hematology and erythroid biology. Nucleic Acids Res. 2004;32:D572–574. doi: 10.1093/nar/gkh129. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 16.Sangokoya C, LaMonte G, Chi JT. Isolation and characterization of microRNAs of human mature erythrocytes. Methods Mol Biol. 2010;667:193–203. doi: 10.1007/978-1-60761-811-9_13. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 17.Teruel-Montoya R, Kong X, Abraham S, Ma L, Kunapuli SP, Holinstat M, Shaw CA, McKenzie SE, Edelstein LC, Bray PF. MicroRNA expression differences in human hematopoietic cell lineages enable regulated transgene expression. PLoS One. 2014;9:e102259. doi: 10.1371/journal.pone.0102259. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 18.Kannan M, Atreya C. Differential profiling of human red blood cells during storage for 52 selected microRNAs. Transfusion. 2010;50:1581–1588. doi: 10.1111/j.1537-2995.2010.02585.x. [DOI] [PubMed] [Google Scholar]
- 19.Ryan P, Atreya C. Blood cell microRNAs: what are they and what future do they hold? Transfus Med Rev. 2011;25:247–251. doi: 10.1016/j.tmrv.2011.01.005. [DOI] [PubMed] [Google Scholar]
- 20.Dumont LJ, AuBuchon JP. Evaluation of proposed FDA criteria for the evaluation of radiolabeled red cell recovery trials. Transfusion. 2008;48:1053–1060. doi: 10.1111/j.1537-2995.2008.01642.x. [DOI] [PubMed] [Google Scholar]
- 21.Chen Y, Zhang J, Gu S, Yin D, An Q, An N, Weng L, Yi J, Xu J, Yin W, Hu X. Mesenchymal stromal cells can be applied to red blood cells storage as a kind of cellular additive. Biosci Rep. 2017;37 doi: 10.1042/BSR20170676. doi: 10.1042/BSR20170676. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 22.Roback JD. Perspectives on the impact of storage duration on blood quality and transfusion outcomes. Vox Sang. 2016;111:357–364. doi: 10.1111/vox.12441. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 23.Alexander PE, Barty R, Fei Y, Vandvik PO, Pai M, Siemieniuk RA, Heddle NM, Blumberg N, McLeod SL, Liu J, Eikelboom JW, Guyatt GH. Transfusion of fresher vs older red blood cells in hospitalized patients: a systematic review and meta-analysis. Blood. 2016;127:400–410. doi: 10.1182/blood-2015-09-670950. [DOI] [PubMed] [Google Scholar]
- 24.Chai-Adisaksopha C, Alexander PE, Guyatt G, Crowther MA, Heddle NM, Devereaux PJ, Ellis M, Roxby D, Sessler DI, Eikelboom JW. Mortality outcomes in patients transfused with fresher versus older red blood cells: a meta-analysis. Vox Sang. 2017;112:268–278. doi: 10.1111/vox.12495. [DOI] [PubMed] [Google Scholar]
- 25.Cooper DJ, McQuilten ZK, Nichol A, Ady B, Aubron C, Bailey M, Bellomo R, Gantner D, Irving DO, Kaukonen KM, McArthur C, Murray L, Pettila V, French C. Age of Red Cells for Transfusion and Outcomes in Critically Ill Adults. N Engl J Med. 2017;377:1858–1867. doi: 10.1056/NEJMoa1707572. [DOI] [PubMed] [Google Scholar]
- 26.Rygard SL, Jonsson AB, Madsen MB, Perner A, Holst LB, Johansson PI, Wetterslev J. Effects of shorter versus longer storage time of transfused red blood cells in adult ICU patients: a systematic review with meta-analysis and Trial Sequential Analysis. Intensive Care Med. 2018;44:204–217. doi: 10.1007/s00134-018-5069-0. [DOI] [PubMed] [Google Scholar]
- 27.Pereira A. Will clinical studies elucidate the connection between the length of storage of transfused red blood cells and clinical outcomes? An analysis based on the simulation of randomized controlled trials. Transfusion. 2013;53:34–40. doi: 10.1111/j.1537-2995.2012.03656.x. [DOI] [PubMed] [Google Scholar]
- 28.Triulzi DJ, Yazer MH. Clinical studies of the effect of blood storage on patient outcomes. Transfus Apher Sci. 201;43:95–106. doi: 10.1016/j.transci.2010.05.013. [DOI] [PubMed] [Google Scholar]
- 29.Fung MK, Grossman BJ, Hillyer CD, Westhofl CW. 18th ed. Bethesda: AABB; 2014. AABB Technical Manual. [Google Scholar]
- 30.Watanabe A, Tagawa H, Yamashita J, Teshima K, Nara M, Iwamoto K, Kume M, Kameoka Y, Takahashi N, Nakagawa T, Shimizu N, Sawada K. The role of microRNA-150 as a tumor suppressor in malignant lymphoma. Leukemia. 2011;25:1324–1334. doi: 10.1038/leu.2011.81. [DOI] [PubMed] [Google Scholar]
- 31.Zhang Y, Liu D, Chen X, Li J, Li L, Bian Z, Sun F, Lu J, Yin Y, Cai X, Sun Q, Wang K, Ba Y, Wang Q, Wang D, Yang J, Liu P, Xu T, Yan Q, Zhang J, Zen K, Zhang CY. Secreted monocytic miR-150 enhances targeted endothelial cell migration. Mol Cell. 2010;39:133–144. doi: 10.1016/j.molcel.2010.06.010. [DOI] [PubMed] [Google Scholar]
- 32.Azzouzi I, Moest H, Winkler J, Fauchere JC, Gerber AP, Wollscheid B, Stoffel M, Schmugge M, Speer O. MicroRNA-96 directly inhibits gamma-globin expression in human erythropoiesis. PLoS One. 2011;6:e22838. doi: 10.1371/journal.pone.0022838. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 33.Listowski MA, Heger E, Boguslawska DM, Machnicka B, Kuliczkowski K, Leluk J, Sikorski AF. microRNAs: fine tuning of erythropoiesis. Cell Mol Biol Lett. 2013;18:34–46. doi: 10.2478/s11658-012-0038-z. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 34.Shi Y, Zhao Y, Shao N, Ye R, Lin Y, Zhang N, Li W, Zhang Y, Wang S. Overexpression of microRNA-96-5p inhibits autophagy and apoptosis and enhances the proliferation, migration and invasiveness of human breast cancer cells. Oncol Lett. 2017;13:4402–4412. doi: 10.3892/ol.2017.6025. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 35.Zhang Z, Joyce BT, Kresovich JK, Zheng Y, Zhong J, Patel R, Zhang W, Liu L, Dou C, McCracken JP, Diaz A, Motta V, Sanchez-Guerra M, Bian S, Bertazzi PA, Schwartz J, Baccarelli AA, Wang S, Hou L. Blood pressure and expression of microRNAs in whole blood. PLoS One. 2017;12:e0173550. doi: 10.1371/journal.pone.0173550. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 36.Candini O, Spano C, Murgia A, Grisendi G, Veronesi E, Piccinno MS, Ferracin M, Negrini M, Giacobbi F, Bambi F, Horwitz EM, Conte P, Paolucci P, Dominici M. Mesenchymal progenitors aging highlights a miR-196 switch targeting HOXB7 as master regulator of proliferation and osteogenesis. Stem Cells. 2015;33:939–950. doi: 10.1002/stem.1897. [DOI] [PubMed] [Google Scholar]
- 37.Capri M, Olivieri F, Lanzarini C, Remondini D, Borelli V, Lazzarini R, Graciotti L, Albertini MC, Bellavista E, Santoro A, Biondi F, Tagliafico E, Tenedini E, Morsiani C, Pizza G, Vasuri F, D'Errico A, Dazzi A, Pellegrini S, Magenta A, D'Agostino M, Capogrossi MC, Cescon M, Rippo MR, Procopio AD, Franceschi C, Grazi GL. Identification of miR-31-5p, miR-141-3p, miR-200c-3p, and GLT1 as human liver aging markers sensitive to donor-recipient age-mismatch in transplants. Aging Cell. 2017;16:262–272. doi: 10.1111/acel.12549. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 38.Kuosmanen SM, Kansanen E, Sihvola V, Levonen AL. MicroRNA Profiling Reveals Distinct Profiles for Tissue-Derived and Cultured Endothelial Cells. Sci Rep. 2017;7:10943. doi: 10.1038/s41598-017-11487-4. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 39.Han W, Daojiang Y, Zhao T. The role of miR-203a in hypertrophic scars and its mechanism. Int J Clin Exp Pathol. 2017;10:5366–5372. [Google Scholar]
- 40.Formosa A, Markert EK, Lena AM, Italiano D, Finazzi-Agro E, Levine AJ, Bernardini S, Garabadgiu AV, Melino G, Candi E. MicroRNAs, miR-154, miR-299-5p, miR-376a, miR-376c, miR-377, miR-381, miR-487b, miR-485-3p, miR-495 and miR-654-3p, mapped to the 14q32.31 locus, regulate proliferation, apoptosis, migration and invasion in metastatic prostate cancer cells. Oncogene. 2014;33:5173–5182. doi: 10.1038/onc.2013.451. [DOI] [PubMed] [Google Scholar]
- 41.Geraldo MV, Nakaya HI, Kimura ET. Down-regulation of 14q32-encoded miRNAs and tumor suppressor role for miR-654-3p in papillary thyroid cancer. Oncotarget. 2017;8:9597–9607. doi: 10.18632/oncotarget.14162. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 42.Luo EC, Chang YC, Sher YP, Huang WY, Chuang LL, Chiu YC, Tsai MH, Chuang EY, Lai LC. MicroRNA-769-3p down-regulates NDRG1 and enhances apoptosis in MCF-7 cells during reoxygenation. Sci Rep. 2014;4:5908. doi: 10.1038/srep05908. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 43.van Rooij E, Sutherland LB, Qi X, Richardson JA, Hill J, Olson EN. Control of stress-dependent cardiac growth and gene expression by a microRNA. Science. 2007;316:575–579. doi: 10.1126/science.1139089. [DOI] [PubMed] [Google Scholar]
- 44.Chen SY, Wang Y, Telen MJ, Chi JT. The genomic analysis of erythrocyte microRNA expression in sickle cell diseases. PLoS One. 2008;3:e2360. doi: 10.1371/journal.pone.0002360. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 45.Wang B, Love TM, Call ME, Doench JG, Novina CD. Recapitulation of short RNA-directed translational gene silencing in vitro. Mol Cell. 2006;22:553–560. doi: 10.1016/j.molcel.2006.03.034. [DOI] [PubMed] [Google Scholar]
- 46.Heneghan HM, Miller N, Lowery AJ, Sweeney KJ, Newell J, Kerin MJ. Circulating microRNAs as novel minimally invasive biomarkers for breast cancer. Ann Surg. 2010;251:499–505. doi: 10.1097/SLA.0b013e3181cc939f. [DOI] [PubMed] [Google Scholar]
- 47.Said AS, Rogers SC, Doctor A. Physiologic impact of circulating RBC Microparticles upon blood-vascular interactions. Front Physiol. 2017;8:1120. doi: 10.3389/fphys.2017.01120. [DOI] [PMC free article] [PubMed] [Google Scholar]
- 48.Dormond O, Madsen JC, Briscoe DM. The effects of mTOR-Akt interactions on anti-apoptotic signaling in vascular endothelial cells. J Biol Chem. 2007;282:23679–23686. doi: 10.1074/jbc.M700563200. [DOI] [PMC free article] [PubMed] [Google Scholar]
Associated Data
This section collects any data citations, data availability statements, or supplementary materials included in this article.