Table 2.
Protein | R503Q | R515L | R515Q | R515W | G6P complex |
---|---|---|---|---|---|
Space Group | P41212 | P41212 | P41212 | P41212 | P41212 |
Unit cell | 172.1 172.1 | 171.3 171.3 | 174.0 174.0 | 172.3 172.3 | 171.9 171.9 |
parameters (Å) | 99.8 | 99.4 | 99.5 | 99.4 | 99.4 |
Resolution (Å) | 60.95 (1.95) | 60.68 (2.20) | 61.5 (2.60) | 60.93 (1.75) | 60.82 (2.30) |
Observations | 1557274 (74492) | 893507 (42745) | 660415 (62010) | 2043537 (59107) | 878402 (37536) |
Unique | 108994 (5314) | 75286 (4379) | 47453 (4566) | 150294 (6946) | 64976 (3790) |
reflections | |||||
Rmerge (I) | 0.14 (1.902) | 0.279 (2.141) | 0.185 (1.846) | 0.089 (1.58) | 0.160 (1.774) |
Rpim (I) | 0.038 (0.526) | 0.084 (0.72) | 0.052 (0.518) | 0.025 (0.561) | 0.045 (0.573) |
Mean I/σ(I) | 15.1 (1.5) | 9.8 (1.2) | 15.2 (1.4) | 20.1 (1.1) | 14.8 (1.3) |
CC1/2 | 0.999 (0.709) | 0.997 (0.693) | 0.998 (0.796) | 0.999 (0.595) | 0.998 (0.656) |
Completeness (%) | 100.0 (99.9) | 100.0 (99.9) | 100.0 (100.0) | 99.7 (93.6) | 97.8 (82.6) |
Multiplicity | 14.3 (14) | 11.9 (9.8) | 13.9 (13.6) | 13.6 (8.5) | 13.5 (9.9) |
No. of protein residues | 1126 | 1128 | 1124 | 1125 | 1128 |
No. of atoms | 9725 | 9316 | 8281 | 9898 | 9259 |
No. of sulfate ions | 18 | 6 | 13 | 5 | 0 |
No. of water molecules | 949 | 635 | 91 | 1180 | 571 |
Rcryst | 0.1693 | 0.1897 | 0.2386 | 0.1652 | 0.1674 |
Rfree | 0.2129 | 0.2507 | 0.2954 | 0.1909 | 0.2263 |
RMSD bond lengths (Å) | 0.007 | 0.007 | 0.010 | 0.006 | 0.007 |
RMSD bond angles (°) | 0.812 | 0.853 | 1.384 | 0.783 | 0.894 |
Ramachandran | |||||
Plot | |||||
Favored (%) | 98.03 | 96.44 | 96.78 | 98.21 | 96.80 |
Outliers (%) | 0.18 | 0.18 | 0.63 | 0.09 | 0.18 |
MOLPROBITY | 98 | 98 | 98 | 99 | 99 |
score (%-tile) | |||||
Average B (Å2) | 41.82 | 52.17 | 71.27 | 32.07 | 41.11 |
Protein | 40.57 | 52.03 | 70.94 | 30.31 | 40.89 |
Water | 45.53 | 50.04 | 52.38 | 42.13 | 42.48 |
Sulfate ions | 112.54/18 | 108.43/6 | 129.77/13 | 67.15/5 | - |
(<B>/#) | |||||
Glucose 6-P | - | - | - | - | 79.21/2 |
(<B>/#) | |||||
Coordinate | 0.197 | 0.295 | 0.454 | 0.211 | 0.270 |
Error (Å) | |||||
PDB code | 5VG7 | 5VEC | 5VIN | 5VBI | 6BJ0 |
Values for the outer resolution shell of data are given in parentheses.
Ramachandran plots generated with Molprobity via the PDB validation server.
Maximum likelihood-based coordinate error estimate reported by PHENIX.