Table A1.
Bayesian coalescent inference of ZIKV strains.
| Parameter | Value a | HPD b | ESS c |
|---|---|---|---|
| Log likelihood | −21,802.85 | −21,852.01 to −21,744.02 | 3179.90 |
| Clock rate d | 1.21 × 10−3 | 7.55 × 10−4 to 1.66 × 10−3 | 4823.21 |
| tMRCA e All | 4.20 | 3.70 to 5.03 | 291.75 |
| 29/6/2013 | 3/10/2012 to 2/13/2014 | ||
| tMRCA e Latin American clade | 3.37 | 2.87 to 6.33 | |
| 3/27/2014 | 10/24/2013 to 11/13/2014 |
a In all cases, the mean values are shown; b HPD, highest posterior density values; c ESS, effective sample size; d clock rate was calculated in substitutions/site/year; e tMRCA, time of the most common recent ancestor is shown in years. The date estimated is indicated in bold.