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. Author manuscript; available in PMC: 2020 Jan 1.
Published in final edited form as: Am J Infect Control. 2018 Sep 8;47(1):2–8. doi: 10.1016/j.ajic.2018.07.014

Predictors of Clostridium difficile Infection and Predictive Impact of Probiotic Use in a Diverse Hospital-Wide Cohort

Martha L Carvour a,b, Shane L Wilder c, Keenan L Ryan d, Carla Walraven d, Fares Qeadan a, Meghan Brett b, Kimberly Page a
PMCID: PMC6321775  NIHMSID: NIHMS1500746  PMID: 30205907

Abstract

Background:

Hospital-based predictive models for Clostridium difficile infection (CDI) may aid with surveillance efforts.

Methods:

A retrospective cohort of adult hospitalized patients who were tested for CDI between May 1, 2011 and August 31, 2016 was formed. Proposed clinical and sociodemographic predictors of CDI were evaluated using multivariable predictive logistic regression modeling.

Results:

In a cohort of 5209 patients, including 1092 CDI cases, emergency department location (adjusted odds ratio, aOR=1.91; 95% confidence interval, CI: 1.51, 2.41; compared to an intensive care unit reference category, which had the lowest observed odds in the study) and prior exposure to a statin (aOR=1.26, 95% CI: 1.06, 1.51), probiotic (aOR=1.39, 95% CI: 1.08, 1.80), or high risk antibiotic (aOR=1.54; 95% CI: 1.29, 1.84), such as a cephalosporin, a quinolone, or clindamycin, were independent predictors of CDI. Probiotic use did not appear to attenuate the odds of CDI in patients exposed to high risk antibiotics, but moderate risk antibiotics appeared to significantly attenuate the odds of CDI in patients who received probiotics.

Discussion/Conclusions:

Emergency department location, high risk antibiotics, probiotics, and statins were independently predictive of CDI. Further exploration of the relationship between probiotics and CDI, especially in diverse patient populations, is warranted.

Keywords: Clostridium difficile, healthcare-associated infection, hospital epidemiology, probiotics

INTRODUCTION

Clostridium difficile (recently renamed Clostridioides difficile1) is the most common cause of healthcare-associated infection in the United States, affecting nearly half a million patients per year and requiring an estimated $4.8 billion in direct acute care costs.24 Although mortality rates following C. difficile infection (CDI) have improved,5 recurrence after treatment occurs in as many as 20% of cases.6 New antimicrobial therapies for CDI—as well as alternative methods to prevent or treat CDI, such as prebiotic and probiotic agents and fecal microbiota transplantation—have been developed.712

CDI prevention and treatment have become high priorities in the healthcare system. Hospital-level CDI data are compared to national benchmarks; and starting in January 2015, the Centers for Medicare and Medicaid Services has withheld funding for hospitals in the lowest quartile. Hospital-onset CDI data are publicly reported on Medicare’s Hospital Compare website.13 Meanwhile, the association of CDI and antimicrobial exposure14,15 has prompted increased support of antimicrobial stewardship programs in acute care hospitals.

Recently, we reviewed our hospital’s experience with CDI over an approximately five-year period at the University of New Mexico (UNM) Hospital, where CDI rates have been higher than expected compared to national benchmarks. We sought to identify CDI predictors that might be monitored or modified at the hospital level, with the long-term goal of reducing CDI rates at UNM.

METHODS

Hospital Setting

The UNM Hospital is a >500-bed academic medical center in Albuquerque, New Mexico, which serves as a safety net hospital for a geographically expansive, “majority-minority” state and which offers care for medically underserved populations throughout the state. It is also the only level 1 trauma center in New Mexico.

Data Source

Data were retrospectively obtained from the UNM Clinical and Translational Science Center Clinical Data Warehouse, which extracts data from the UNM electronic medical record for research use. A unique study number was assigned to each patient in the cohort to permit linkage across analytic files, and original identifiers were removed before transmission of the data to the research team. The UNM Institutional Review Board reviewed and exempted the study.

Cohort Selection

All hospitalized adult patients (≥18 years of age) with one or more CDI assays recorded between May 1, 2011 and August 31, 2016 were eligible. A new CDI assay system was implemented at the UNM Hospital in April 2011, so data collection for our study began the month after this change. CDI tests using any assay (e.g., enzyme immunoassay or nucleic acid amplification/polymerase chain reaction, which were in combined use during the study period) and any diagnostic result (e.g., positive or negative) were included. In keeping with our hospital’s laboratory protocol, only specimens conforming to the shape of the container were eligible.

Outcome Definition

Patients with any positive CDI assay at any time during the study period were classified as CDI cases. If more than one positive result was recorded for the patient, the first positive result during the study period was used as the index record. Patients with one or more CDI assays with no recorded positive result during the study period were classified as not having CDI, and the first negative result in the study period was used as the index record.

Sociodemographic Predictors

Sex and race/ethnicity were based on the electronic medical record. Age was defined as the patient’s age at the time of diagnosis and was analyzed as both a continuous and categorical variable (e.g., ≥65 years versus <65 years, based on findings elsewhere in the CDI literature16).

Spatiotemporal Predictors

Season was defined using the month during which the CDI assay was performed (e.g., December through February, March through May, June through August, and September through November). For modeling purposes, season was used instead of year of diagnosis. Seasonality may be associated with other important patterns (e.g., other seasonal outbreaks and antimicrobial prescribing patterns)17 and may be carried forward to future years as a meaningful temporal unit.

Location was defined as the last recorded hospital unit prior to the CDI assay (e.g., the presumed location of the patient at the time of diagnosis), and locations were classified into four broad categories—emergency department (ED); general inpatient units, including medical and surgical wards; intensive care units; and other inpatient units, including obstetrics/gynecology, rehabilitation, and preadmission units.

Clinical Predictors

Antibacterial and antifungal agents, bacterial and fungal probiotics, steroids and other immunosuppressants, statins,18,19 proton pump inhibitors (PPIs),20 and anti-diabetes medications21 recorded within the 180-day window prior to the CDI diagnosis were included. Antibacterial agents were classified into low, moderate, and high CDI risk strata (Table 1).14,15,22

Table 1.

Antibacterial risk strata used for logistic regression modeling, with corresponding unadjusted and adjusted odds ratios for Clostridium difficile infection for each stratum

High Risk
Antibacterial Agents
Moderate Risk
Antibacterial Agents
Low Risk
Antibacterial Agents

Cefaclor Amoxicillin Amikacin
Cefadroxil Amoxicillin-Clavulanate Azithromycin
Cefazolin Ampicillin Aztreonam
Cefdinir Ampicillin-Sulbactam Clarithromycin
Cefepime Avibactam-Ceftazidime Colistimethate
Cefixime Dicloxacillin Dapsone
Cefotaxime Ertapenem Daptomycin
Cefoxitin Imipenem-Cilastatin Doxycycline
Cefpodoxime Meropenem Erythromycin
Cefprozil Nafcillin Fosfomycin
Ceftaroline Oxacillin Gentamicin
Ceftazidime Penicillin G Benzathine Linezolid
Ceftriaxone Penicillin G Potassium Minocycline
Ceftriaxone Penicillin G Sodium Nitrofurantoin
Cefuroxime Penicillin V Potassium Rifabutin
Cephalexin Piperacillin Rifampin
Ciprofloxacin Piperacillin-Tazobactam Rifapentine
Clindamycin Vancomycin* Rifaximin
Levofloxacin Streptomycin
Moxifloxacin Sulfadiazine
Norfloxacin Sulfamethoxazole
Ofloxacin Sulfamethoxazole-
Trimethoprim
Tetracycline
Tigecycline
Tobramycin
Trimethoprim

Unadjusted OR=1.46 Unadjusted OR=1.07 Unadjusted OR=0.96
(95% CI: 1.24, 1.72) (95% CI: 0.93, 1.22) (95% CI: 0.83, 1.11)

Adjusted OR=1.60 Adjusted OR=1.03 Adjusted OR=0.83
(95% CI: 1.33, 1.92) (95% CI: 0.89, 1.20) (95% CI: 0.71, 0.98)

OR: Odds ratio. CI: Confidence interval.

*

Vancomycin administered by any systemic route (e.g., intravenous infusion) was classified as a moderate risk antibacterial agent. Vancomycin administered by mouth, by feeding tube, or per rectum was classified as a possible Clostridium difficile treatment agent. Other treatment agents included metronidazole and fidaxomicin. Treatment agents were not included in the low, moderate, or high risk strata.

Adjusted ORs are from a multivariable model containing location type, age (≥65 versus <65 years), all three antibacterial risk strata, antifungal agents, probiotics, and statins.

Diabetes was defined as having either a prescription for one or more anti-diabetes medication (e.g., metformin or insulin) within the 180-day window prior to the CDI assay and/or any hemoglobin A1c ≥6.5% during the study period, using the hemoglobin A1c value nearest to the date of the CDI assay.

Predictive Modeling

Sociodemographic and clinical predictors of CDI were evaluated using predictive logistic regression modeling. Variables with p-values <0.10 in an unadjusted model were eligible for inclusion in a multivariable model. Variables with p-values <0.05 in the multivariable model were retained. Manual forward and backward selection procedures were applied, and the resulting models were compared.

Although stringent p-value cutoffs (as above) were applied in order to achieve a parsimonious model, a sensitivity analysis was performed using <0.20 for entry into the model and <0.10 for retention. The classification of antibacterial agents into low, moderate, and high risk strata was internally evaluated in our dataset by comparing the odds ratios (ORs) across strata. Analyses were conducted in SAS version 9.4 (SAS Institute, Inc., Cary, NC). P-values <0.05 were deemed statistically significant.

Power Calculations

A multivariable model with ≤10 predictors was anticipated. Thus, a minimum of 100 cases was desired (e.g., 10 CDI cases per predictor variable).23 Hospital epidemiological surveillance data available prior to this study suggested that an average of 200-300 cases of CDI occurred each year. Since this annual estimate can include recurrent cases, a conservative minimum of 100 cases per year was expected. In order to permit stratified analyses, >5 years of data were included.

Post Hoc Analyses

During the planned analysis, probiotics were identified as a positive predictor of CDI. Since probiotics are a proposed preventive therapy for CDI, their role as a surrogate marker of CDI risk (that is, as a clinical predictor but not necessarily a causal factor) was considered. A series of exploratory post hoc analyses was performed, in order to better understand the context of probiotic use within the dataset, assess for potential evidence of bias, and generate future hypotheses.

First, to determine whether this finding reflected a diagnostic lag—that is, whether probiotics were ordered in the days or weeks prior to a CDI diagnosis in the setting of concurrent or unapparent CDI—probiotic orders recorded in the 0 to 60 days before the assay were compared to those recorded between 61 and 120 days and between 121 and 180 days.

Next, to determine whether the apparent relationship of probiotics and positive CDI assays was modified by any other variable in the model, antibacterial or antifungal use, or the type of assay used to diagnose CDI, interaction terms were tested for each of these variables in a multivariable model containing location type, age (≥65 versus <65 years), antibacterial use, and antifungal use.

Lastly, to evaluate whether the observed association was driven by a particular subtype of probiotics, probiotic orders were stratified into bacterial (including Lactobacillus and/or Bifidobacterium species) and fungal (including Saccharomyces species) subtypes. Adjusted ORs were compared for these subtypes.

RESULTS

Cohort Characteristics

The cohort consisted of 5209 patients who were tested for CDI during the study period, including 1092 cases with at least one positive CDI assay during the study period. The characteristics of patients with and without CDI are summarized in Table 2. CDI cases were more likely to be <65 years of age (p=0.07); to be located in the ED at the time of the diagnosis (p<0.0001); and to receive a statin (p=0.01), probiotic (p=0.0002), or high risk antibacterial agent (p<0.0001) in the 180-day window before the CDI diagnosis. All of these variables were eligible for multivariable modeling.

Table 2.

Characteristics of patients with and without Clostridium difficile infection (CDI) (n=5209 unless otherwise specified)

CDI (n=1092) No CDI (n=4117) P-Value*

Sex
 Male 559 (51.2%) 2105 (51.1%) 0.97

Race/Ethnicity (n=5073)
 White Non-Hispanic 425 (39.9%) 1551 (38.7%) 0.61
 Hispanic 379 (35.6%) 1507 (37.6%)
 American Indian/Alaskan Native 189 (17.7%) 653 (16.3%)
 Black Non-Hispanic 22 (2.1%) 85 (2.1%)
 Other 51 (4.8%) 211 (5.3%)

Age
 Mean (Median, SD) in Years 56.6 (57.0, 17.1) 57.5 (59.0, 17.1) 0.12
 N (%)>=65 365 (33.4%) 1497 (36.4%) 0.07

Season
 December through February 291 (26.7%) 1066 (25.9%) 0.56
 March through May 273 (25.0%) 1057 (25.7%)
 June through August 268 (24.5%) 1076 (26.1%)
 September through November 260 (23.8%) 918 (22.3%)

Location Type (n=4599)
 General Inpatient 519 (54.3%) 2078 (57.0%) <0.0001
 Emergency Department 204 (21.3%) 538 (14.8%)
 Intensive Care Unit 195 (20.4%) 882 (24.2%)
 Other 38 (4.0%) 145 (4.0%)

Proton Pump Inhibitor (n=4822)
 Within Preceding 180 Days 477 (45.7%) 1699 (45.0%) 0.70

Immunosuppressant
 Within Preceding 180 Days
 Any (n=4851) 453 (43.2%) 1645 (43.3%) 0.99
 Steroid (n=4822) 365 (34.9%) 1255 (33.2%) 0.30

Statin (n=4822)
 Within Preceding 180 Days 236 (22.6%) 720 (19.1%) 0.01

Probiotic (n=4822)
 Within Preceding 180 Days 117 (11.2%) 284 (7.5%) 0.0002

Antibacterial Agent (n=4822)
 Within Preceding 180 Days
 High Risk 817 (78.2%) 2685 (71.1%) <0.0001
 Moderate Risk 508 (48.6%) 1775 (47.0%) 0.35
 Low Risk 349 (33.4%) 1295 (34.3%) 0.59

Antifungal Agent (n=4822)
 Within Preceding 180 Days 126 (12.1%) 482 (12.8%) 0.54

Diabetes (n=4989)
 One or More Study Criterion 384 (36.0%) 1335 (34.1%) 0.24
*

All p-values are from an unadjusted logistic regression model in which the modeled outcome is CDI and the variable listed in the table is the single predictor in the model. The p-values shown in the table were used to determine eligibility for the multivariable selection procedure (eligible if p<0.10).

There were no significant differences between groups with respect to sex, race/ethnicity, seasonality, diabetes, or other medication types (as shown in Table 2). The organization of antibacterial agents into high, moderate, and low risk strata corresponded to an expected gradient in the ORs across the three strata (Table 1), although the low and moderate risk strata had similar odds and overlapping confidence intervals.

Multivariable Model Results

Inpatient location type, statins, probiotics, and high risk antibacterial agents were significant independent predictors of CDI in the multivariable model (Table 3). Patients in the ED had the highest odds of a positive CDI assay (adjusted OR, aOR=1.91; 95% confidence interval, CI: 1.51, 2.41; compared to the intensive care unit reference category, which had the lowest odds). Receipt of high risk antibacterial agents in the 180 days preceding CDI was associated with a more than 50% increase in the odds of a positive assay (aOR=1.54; 95% CI: 1.29, 1.84).

Table 3.

Multivariable predictive logistic regression model for Clostridium difficile infection (n=4278)

Unadjusted OR (95% CI) Adjusted OR (95% CI)*

Location Type
 Emergency Department 1.72 (1.37, 2.15) 1.91 (1.51, 2.41)
 General Inpatient Unit 1.13 (0.94, 1.36) 1.11 (0.92, 1.34)
 Other Inpatient Unit 1.19 (0.80, 1.75) 1.26 (0.84, 1.90)
 Intensive Care Unit 1.00 (reference category) 1.00 (reference category)

High Risk Antibacterial Agent
 Within Preceding 180 Days 1.46 (1.24, 1.72) 1.54 (1.29, 1.84)

Probiotics
 Within Preceding 180 Days 1.55 (1.24, 1.95) 1.39 (1.08, 1.80)

Statin
 Within Preceding 180 Days 1.24 (1.05, 1.46) 1.26 (1.06, 1.51)

OR: Unadjusted or adjusted odds ratio, as indicated within the table. CI: Confidence interval.

*

Adjusted ORs are from a model containing all of the variables shown in this table. The c-statistic for the adjusted model is 0.59.

The dichotomized age variable (≥65 versus <65 years) was not retained in the multivariable model (p=0.07). In the sensitivity analysis, using p<0.20 for entry into the model and p<0.10 for retention, the dichotomized age variable was retained (aOR=1.15; 95% CI: 0.98, 1.34; for age <65 years compared to ≥65). However, this model produced similar characteristics (Akaike information criterion and c-statistic) and similar beta estimates for the other variables in the model compared to the primary model. Similarly, forcing PPI or steroid use into the model shown in Table 3 revealed comparable beta estimates for all other variables.

Probiotics Analysis

Probiotics recorded between 0 and 60 days and between 61 and 120 days were associated with significantly increased odds of CDI, with the highest odds observed between 61 to 120 days (Appendix). This pattern differed for another prescription-related predictor (i.e., statins, Appendix), which was examined for comparison. Probiotics did not significantly interact with the type of diagnostic assay (p=0.40) or the year of diagnosis (p=0.20).

A significant interaction was observed between probiotics and moderate risk antibacterial agents (p=0.01, Appendix), in which co-administration of probiotics and moderate risk antibacterial agents in the 180 days preceding the CDI diagnosis attenuated the odds associated with probiotics alone. A similar overall pattern was observed for low risk and high risk antibacterial agents, although these interactions were not statistically significant (p=0.08 for each test for interaction; Appendix). This pattern was not observed with antifungal agents (p=0.19, Appendix).

Bacterial probiotics, including Lactobacillus and Bifidobacterium species, were associated with the highest independent odds of a positive CDI assay (aOR = 1.49; 95% CI: 1.11, 2.01; compared to no probiotics and adjusted for location type, age ≥65 versus <65 years, antibacterial and antifungal agents, and statins). Fungal probiotics, including Saccharomyces species, were associated with a weaker increase in the odds of CDI (aOR = 1.22; 95% CI: 0.75, 1.98; compared to no probiotics and adjusted as above).

DISCUSSION

In this diverse cohort of over 5200 hospitalized patients, including over 1000 CDI cases, several factors independently predicted the occurrence of CDI. Important contextual factors about our cohort should be noted. As a “majority-minority” state, New Mexico represents a unique study population with respect to race and ethnicity. Approximately one-third of the patients in our study identified as Hispanic, and over 16% identified as American Indian/Alaskan Native.

A distinctive set of geographic and socioeconomic factors also influences healthcare in New Mexico. Over 40% of New Mexicans live in a primary care health professional shortage area, and about 20% of the state’s population lives at or below the poverty line.24 The UNM Hospital provides care for many medically underserved patients throughout the state.

Our model should be interpreted with two important methodological provisos in mind: First, it was constructed for the purposes of predicting CDI among those tested, not for demonstrating causal relationships between any one variable and the outcome of CDI. Second, patients with and without CDI were all tested for CDI and, therefore, may have shared more clinical factors compared to others in the hospital population. Thus, our results cannot be extrapolated directly to the risk of CDI resulting from the predictors that were significant—or not significant—in our model.

As an example, we did not observe a significantly increased odds of CDI among patients who received PPIs or steroids. However, the cohort consisted of hospitalized patients in whom CDI was already suspected, with high overall rates of PPI (45.1%) and steroid (33.6%) use. Although PPIs and steroids did not predict CDI in our study, this does not exclude the possibility that either PPIs or steroids could increase CDI risk.

Similarly, we did not find age ≥65 years to be a significant predictor of CDI. In fact, older patients in our cohort were less likely to have CDI. This must also be interpreted in the context of the study population—adult hospitalized patients—for which our model predicts the odds of diagnosis and not necessarily the incidence of infection. Patients ≥65 years old may have been diagnosed at home, at nursing facilities, or at other hospitals where Medicare-eligible patients may be seen.

Variables that independently predicted CDI in our study (Table 3) were inpatient location type and use of high risk antibacterial agents, statins, and probiotics. Patients were most likely to have a recorded location in the ED at or immediately preceding their CDI diagnosis. This finding could represent a number of underlying factors—such as a high frequency of ED visits, perhaps comprising a primary healthcare access point for many patients in the community; high frequencies of antibiotic prescribing and/or CDI testing in the ED; or potential delays in admission to other inpatient units due to precautionary isolation practices. Similarly, statin use may constitute a measure of increased healthcare access in our study. The relationship of statin use and CDI remains a subject of interest in the literature18,19, although the nature and direction of this relationship is not yet clear.

The positive association of probiotic use with subsequent CDI was unexpected. Prior studies have suggested that probiotics may prevent CDI, although results have varied depending on the type, timing, and setting of CDI as well as the type of probiotic.812,2527 To date, there is neither scientific consensus nor Food and Drug Administration approval for the uniform use of probiotics to prevent CDI.

As described above, this result should be interpreted with care. Probiotics independently predicted the odds of CDI in our cohort, but this does not demonstrate that probiotics caused or contributed to the causes of CDI. Even so, if probiotics had exerted a strong protective effect in the cohort, we might have expected probiotics to impose a negative (or perhaps a null) predictive impact. Recognizing that the direction of the association in our study was unexpected, we undertook a series of post hoc analyses to better understand the context of this result.

First, we anticipated that diagnostic lags between the onset of CDI symptoms (at which time probiotics may have been ordered) and CDI diagnoses may have created an inaccurate impression that probiotic use actually preceded the infection. As shown in the Appendix, however, the odds of CDI following a probiotic prescription remain elevated for up to four months after recorded probiotic use; and in fact, the highest odds were observed for probiotics recorded two to four months before the CDI diagnosis. Thus, it is not likely that short-term diagnostic lags can fully explain our observation.

Similarly, if the observed impact of probiotics differed significantly over time—that is, if this was concentrated early in the study period—we might have concluded that probiotics were markers of existing CDI and that most of the cases driving the association were pre-existing or recurrent infections. However, the relationship of probiotics and CDI diagnosis did not change significantly over time, as evidenced by the absence of a significant statistical interaction between probiotics and the year of diagnosis.

Next, we considered the possibility that patients were more likely to be treated with probiotics during periods of increased exposure to the healthcare environment. The observed temporal patterns in the Appendix do not support this. The highest odds of probiotic use occurred in a time window distinct from that in which the CDI diagnosis was made, and this pattern differed from the association of CDI and statin prescriptions—another possible surrogate for healthcare exposures.

Finally, we anticipated that probiotics may be a surrogate marker for another correlated variable or set of variables. To obtain preliminary, hypothesis-generating information, we assessed whether the predictive impact of probiotics differed according to other clinical factors, including antimicrobial therapies. This analysis revealed several further, unexpected findings (Appendix).

Co-administration of probiotics with high risk antibacterial agents in the 180 days preceding the CDI diagnosis did not significantly attenuate the odds of CDI associated with high risk antibacterial therapies (Appendix, Figure Panel C). Instead, co-administration of moderate risk antibacterial agents with probiotics in the 180 days preceding the CDI diagnosis actually appeared to attenuate the odds of CDI associated with probiotics (Panel B). This general pattern was observed for all antibacterial strata but not for antifungal agents (Figure 1, Panels A-D). Meanwhile, bacterial probiotics were also stronger predictors of CDI than fungal probiotics.

Prior evidence suggests that race, ethnicity, and socioeconomic position may all impact CDI risk28 and microbiomic composition at various anatomic sites.29,30 If so, specific probiotic therapies for CDI may only be useful insofar as we understand the underlying microbiomic environments across which these are applied. Further attention may need to be directed to understanding the CDI epidemic and its microbiomic drivers in diverse and medically underserved populations in order to distinguish between the causes of CDI on a population level—a worldwide problem and one clearly still observed in our hospital—and not just the causes of individual cases.31,32

In this diverse cohort, patients with CDI were most commonly diagnosed while in the ED and were likely to have prior exposures to high risk antibacterial agents, probiotics, and statins. Our study is limited by the retrospective and observational nature of data collection. Specific information about clinical impressions, adherence with prescribed therapies, and exposure to therapies other than those recorded in the electronic medical record was not available for this study. Future prospective CDI research should consider potential differences in microbiomic composition, CDI prevention, and CDI treatment in diverse and medically underserved populations.

HIGHLIGHTS.

  • C. difficile infection (CDI) was most frequently diagnosed in the emergency room.

  • Exposures to high risk antibiotics, statins, and probiotics were predictive of CDI.

  • Probiotics did not appear to attenuate the odds of CDI in patients on antibiotics.

  • Some antibiotics appeared to attenuate the odds of CDI in patients on probiotics.

  • Bacterial probiotics were associated with higher odds of CDI than fungal probiotics.

ACKNOWLEDGEMENTS

Financial Support: This work was supported by the Infectious Diseases Society of America Foundation Medical Scholars Program and the University of New Mexico Clinical and Translational Sciences Center (National Institutes of Health grant UL1TR001449).

Appendix

This document contains two supplemental exhibits from the post hoc analysis of probiotic use and Clostridium difficile infection (CDI) as described in the main article text.

Table.

Comparative odds of CDI for patients exposed to probiotics or statins in different time windows within the 180-day period prior to diagnosis

Time Window Probiotics OR (95% CI)* Statins OR (95% CI)*
 0 to 60 Days (n=4209) 1.32 (0.99, 1.77) 1.24 (1.03, 1.51)
 61 to 120 Days (n=1199) 1.84 (1.02, 3.32) 0.84 (0.58, 1.20)
121 to 180 Days (n=948) 0.95 (0.41, 2.18) 1.31 (0.90, 1.91)

OR: Odds ratio. CI: Confidence interval.

*

ORs correspond to a multivariable model containing probiotics, statins, location type, age (≥65 versus <65 years), all three antibacterial risk strata, and antifungal agents. ORs represent the odds of CDI for patients exposed to the medication versus those not exposed (e.g., probiotic versus no probiotic, statin versus no statin).

Figure.

Figure.

Association of probiotics and CDI stratified by co-exposure to (A) low risk antibacterial agents, (B) moderate risk antibacterial agents, (C) high risk antibacterial agents, or (D)antifungal agents (n=4278). A statistically significant interaction was observed between probiotics and moderate risk antibacterial agents (p=0.01). Adjusted odds ratios (OR) and 95% confidence intervals (CI) are shown for patients who received probiotics with or without an antimicrobial agent in the same 180-day period. Each panel (A-D) represents a separate model. ORs are adjusted for location type, age (≥65 versus <65 years), statins, and all other antibacterial and antifungal strata not already included in the interaction term. For instance, the moderate risk panel (B) shows the ORs for a hybrid variable combining moderate risk antibacterial agents with or without probiotics, and the ORs in that figure are adjusted for low and high risk antibacterial agents, antifungal agents, statins, age, and location.

Footnotes

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Conflicts of Interest: All authors report no conflicts of interest relevant to this article.

REFERENCES

  • 1.Clinical and Laboratory Standards Institute Supplement M100, 28th edition. http://em100.edaptivedocs.net/Login.aspx Published 2018. Accessed July 16, 2018.
  • 2.Magill SS, Edwards JR, Bamberg W, et al. Multistate point-prevalence survey of health care-associated infections. N Engl J Med. 2014. March 27;370(13):1198–208. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 3.Lessa FC, Mu Y, Bamberg WM, et al. Burden of Clostridium difficile Infection in the United States. N Engl J Med. 2015. February 26;372(9):825–34. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 4.Dubberke ER, Olsen MA. Burden of Clostridium difficile on the Healthcare System. Clin Infect Dis. 2012. August 1;55(suppl_2):S88–92. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 5.Shrestha MP, Bime C, Taleban S. Decreasing Clostridium difficile –Associated Fatality Rates Among Hospitalized Patients in the United States: 2004–2014. Am J Med. 2018. January;131(1): 90–6. [DOI] [PubMed] [Google Scholar]
  • 6.Eyre DW, Walker AS, Wyllie D, et al. Predictors of First Recurrence of Clostridium difficile Infection: Implications for Initial Management. Clin Infect Dis. 2012. August 1;55(suppl 2):S77–87. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 7.Galpérine T, Guery B. Exploring ways to improve CDI outcomes. Médecine Mal Infect. 2018. February;48(1):10–7. [DOI] [PubMed] [Google Scholar]
  • 8.Allen SJ. The Potential of Probiotics to Prevent Clostridium difficile Infection. Infect Dis Clin North Am. 2015. March;29(1):135–4. [DOI] [PubMed] [Google Scholar]
  • 9.Hell M, Bernhofer C, Stalzer P, Kern JM, Claassen E. Probiotics in Clostridium difficile infection: reviewing the need for a multistrain probiotic. Benef Microbes. 2013. March;4(1):39–51. [DOI] [PubMed] [Google Scholar]
  • 10.Goldenberg JZ, Ma SS, Saxton JD, et al. Probiotics for the prevention of Clostridium difficile-associated diarrhea in adults and children In: The Cochrane Collaboration, editor. Cochrane Database of Systematic Reviews. Chichester, UK: John Wiley & Sons, Ltd; http://doi.wiley.com/10.1002/14651858.CD006095.pub4/full Published 2013. Accessed July 16, 2018. [DOI] [PubMed] [Google Scholar]
  • 11.Evans CT, Johnson S. Prevention of Clostridium difficile Infection With Probiotics. Clin Infect Dis. 2015. May 15;60(suppl_2):S122–8. [DOI] [PubMed] [Google Scholar]
  • 12.Pattani R, Palda VA, Hwang SW, Shah PS. Probiotics for the prevention of antibiotic-associated diarrhea and Clostridium difficile infection among hospitalized patients: systematic review and meta-analysis. Open Med Peer-Rev Indep Open-Access J. 2013;7(2):e56–67. [PMC free article] [PubMed] [Google Scholar]
  • 13.Medicare.gov Hospital Compare. Centers for Medicaid and Medicare Services. https://www.medicare.gov/hospitalcompare/search.html? Accessed July 16, 2018.
  • 14.Slimings C, Riley TV. Antibiotics and hospital-acquired Clostridium difficile infection: update of systematic review and meta-analysis. J Antimicrob Chemother. 2014. April;69(4):881–91. [DOI] [PubMed] [Google Scholar]
  • 15.Crew PE, Rhodes NJ, O’Donnell JN, et al. Correlation between hospital-level antibiotic consumption and incident health care facility-onset Clostridium difficile infection Am J Infect Control. http://linkinghub.elsevier.com/retrieve/pii/S0196655317310672 Published 2017. Accessed July 16, 2018. [DOI] [PubMed]
  • 16.van Werkhoven CH, van der Tempel J, Jajou R, et al. Identification of patients at high risk for Clostridium difficile infection: development and validation of a risk prediction model in hospitalized patients treated with antibiotics. Clin Microbiol Infect. 2015. August;21(8):786.e1–786.e8. [DOI] [PubMed] [Google Scholar]
  • 17.Brown KA, Daneman N, Arora P, Moineddin R, Fisman DN. The Co-Seasonality of Pneumonia and Influenza With Clostridium difficile Infection in the United States, 1993-2008. Am J Epidemiol. 2013. July 1; 178(1): 118–25. [DOI] [PubMed] [Google Scholar]
  • 18.Motzkus-Feagans CA, Pakyz A, Polk R, Gambassi G, Lapane KL. Statin use and the risk of Clostridium difficile in academic medical centres. Gut. 2012. November;61(11):1538–42. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 19.Nseir W, Bishara J, Mograbi J, et al. Do statins protect against the development of Clostridium difficile-associated diarrhoea? J Antimicrob Chemother. 2013. August 1;68(8):1889–93. [DOI] [PubMed] [Google Scholar]
  • 20.Kwok CS, Arthur AK, Anibueze CI, Singh S, Cavallazzi R, Loke YK. Risk of Clostridium difficile infection with acid suppressing drugs and antibiotics: meta-analysis. Am J Gastroenterol. 2012. July;107(7):1011–9. [DOI] [PubMed] [Google Scholar]
  • 21.Piper MS, Saad RJ. Diabetes Mellitus and the Colon. Curr Treat Options Gastroenterol. 2017. December; 15(4):460–74. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 22.Brown KA, Khanafer N, Daneman N, Fisman DN. Meta-Analysis of Antibiotics and the Risk of Community-Associated Clostridium difficile Infection. Antimicrob Agents Chemother.2013. May;57(5):2326–32. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 23.Peduzzi P, Concato J, Kemper E, Holford TR, Feinstein AR. A simulation study of the number of events per variable in logistic regression analysis. J Clin Epidemiol. 1996. December;49(12): 1373–9. [DOI] [PubMed] [Google Scholar]
  • 24.2017 NM Health Data Summary. University of New Mexico Health Sciences Center. https://hsc.unm.edu/research/ctsc/assets/doc/CERC/nm-health-data-summary.pdf Published 2017. Accessed July 16, 2018.
  • 25.Goldstein EJC, Citron DM, Claros MC, Tyrrell KL. Bacterial counts from five over-the-counter probiotics: Are you getting what you paid for? Anaerobe. 2014. February;25:1–4. [DOI] [PubMed] [Google Scholar]
  • 26.Maziade P-J, Andriessen JA, Pereira P, Currie B, Goldstein EJC. Impact of adding prophylactic probiotics to a bundle of standard preventative measures for Clostridium difficile infections: enhanced and sustained decrease in the incidence and severity of infection at a community hospital. Curr Med Res Opin. 2013. October;29(10):1341–7. [DOI] [PubMed] [Google Scholar]
  • 27.Chopra T, Goldstein EJC. Clostridium difficile Infection in Long-term Care Facilities: A Call to Action for Antimicrobial Stewardship. Clin Infect Dis. 2015. May 15;60(suppl_2):S72–6. [DOI] [PubMed] [Google Scholar]
  • 28.Mao EJ, Kelly CR, Machan JT. Racial Differences in Clostridium difficile Infection Rates Are Attributable to Disparities in Health Care Access. Antimicrob Agents Chemother. 2015. October;59(10):6283–7. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 29.Mello CS, Carmo-Rodrigues MS, Filho HBA, et al. Gut Microbiota Differences in Children From Distinct Socioeconomic Levels Living in the Same Urban Area in Brazil. J Pediatr Gastroenterol Nutr. 2016;63(5):460–5. [DOI] [PubMed] [Google Scholar]
  • 30.Ravel J, Gajer P, Abdo Z, et al. Vaginal microbiome of reproductive-age women. Proc Natl Acad Sci. 2011. March 15;108(Supplement_1):4680–7. [DOI] [PMC free article] [PubMed] [Google Scholar]
  • 31.Rose G Sick individuals and sick populations. Int J Epidemiol. 1985. March;14(1):32–8. [DOI] [PubMed] [Google Scholar]
  • 32.Schwartz S, Carpenter KM. The right answer for the wrong question: consequences of type III error for public health research. Am J Public Health. 1999. August;89(8):1175–80. [DOI] [PMC free article] [PubMed] [Google Scholar]

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