Patient-specific 3D printed model of biliary ducts with congenital cyst

Abstract

Background

3D printing has shown great promise in medical applications, with increasing reports in liver diseases. However, research on 3D printing in biliary disease is limited with lack of studies on validation of model accuracy. In this study, we presented our experience of creating a realistic 3D printed model of biliary ducts with congenital cyst. Measurements of anatomical landmarks were compared at different stages of model generation to determine dimensional accuracy.

Methods

Contrast-enhanced computed tomography (CT) images of a patient diagnosed with congenital cyst in the common bile duct with dilated hepatic ducts were used to create the 3D printed model. The 3D printed model was scanned on a 64-slice CT scanner using the similar abdominal CT protocol. Measurements of anatomical structures including common hepatic duct (CHD), right hepatic duct (RHD), left hepatic duct (LHD) and the cyst at left to right and anterior to posterior dimensions were performed and compared between original CT images, the standard tessellation language (STL) image and CT images of the 3D model.

Results

The 3D printing model was successfully generated with replication of biliary ducts and cyst. Significant differences in measurements of these landmarks were found between the STL and the original CT images, and the CT images of the 3D printed model and the original CT images (P<0.05). Measurements of the RHD and LHD diameters from the original CT images were significantly larger than those from the CT images of 3D model or STL file (P<0.05), while measurements of the CHD diameters were significantly smaller than those of the other two datasets (P<0.05). No significant differences were reached in measurements of the CHD, RHD, LHD and the biliary cyst between CT images of the 3D printed model and STL file (P=0.08–0.98).

Conclusions

This study shows our experience in producing a realistic 3D printed model of biliary ducts and biliary cyst. The model was found to replicate anatomical structures and cyst with high accuracy between the STL file and the CT images of the 3D model. Large discrepancy in dimensional measurements was noted between the original CT and STL file images, and the original CT and CT images of the 3D model, highlighting the necessity of further research with inclusion of more cases of biliary disease to validate accuracy of 3D printed biliary models.

Introduction

Three-dimensional (3D) printing has been increasingly used in medical applications with creation of accurate patient-specific 3D printed models using medical imaging data (1-4). 3D printed physical models have been shown to improve our understanding of complex anatomy and pathology, assist clinical decision making by serving as a valuable tool for preoperative planning, simulation and education, as well as develop optimal scanning protocols for radiation dose reduction (5-10). A high degree of accuracy of 3D printed models is of paramount importance to assist physicians in developing personalized medicine for patient’s treatment options, thus minimizing risks and complications associated with surgical procedures and improving patient outcomes (11). Applications of 3D printed models are mainly dominated by orthopedics and maxillofacial surgery with increasing roles in cardiovascular disease (12-19), however, its use in hepatobiliary disease is limited.

3D printed liver models have been confirmed to overcome limitations of traditional computed tomography (CT) or magnetic resonance imaging (MRI) imaging by providing accurate assessment of complex hepatic anatomy and pathology, and assisting selection of appropriate surgical procedures for hepatic tumors or liver transplantation (16-20). A recent systematic review has analyzed 19 studies of reporting the usefulness of 3D printed liver models in the simulation of liver surgeries (21). In contrast, research on 3D printing in biliary disease is limited with only a few case reports available in the literature (22-24). Furthermore, model accuracy and clinical value of 3D printed biliary system and disease remains to be determined. Therefore, the purpose of this study was to create a patient-specific 3D printed biliary model with the aim of validating model accuracy by comparing measurements performed at different stages of model generation.

Methods

Selection of a sample case

A sample case of a patient diagnosed with congenital cyst in the common bile duct with dilated hepatic ducts on CT was selected for generation of the 3D model. Contrast-enhanced CT was performed on a 128-slice dual-source CT scanner (Siemens Definition Flash, Siemens Healthcare, Forchheim, Germany) with the following scanning protocol: detector collimation 2 × 64-slice × 0.6 mm with gantry rotation of 330 ms, 100 kVp and 282 mAs, a slice thickness of 1.0 mm with resulting voxel size of 0.70×0.70×0.70 mm³.

Image post-processing and segmentation

Original CT images in Digital Imaging and Communications in Medicine (DICOM) format were transferred to a separate workstation with Analyze 12.0 (AnalyzeDirect Inc., Lexana, KS, USA) for post-processing and segmentation. A median filter was first applied to the CT volume data to improve the anatomical boundaries by reducing image noise, followed by the use of manual and semi-automatic segmentation approaches to segment the biliary tree and cyst from the surrounding structures such as soft tissues, bones, and other unwanted structures. Special attention was paid to the anatomical structures of the biliary tract including left hepatic duct (LHD), right hepatic duct (RHD), and common hepatic duct (CHD) which were segmented for inclusion in the final 3D model. A smoothing filter was also applied to the segmented volume data to improve the surface quality of the model. The final dataset was exported into Standard Tessellation Language (STL) format for 3D printing.

The STL file was imported into the Blender ver 2.79b (Stitching Blender Foundation, The Netherlands) open-source software to further edit the digital file (25). During the editing process, some deformities or free-floating objects were removed, with any holes fixed and the model created as hollow. A thickness of 2 mm was added to the external walls of model to ensure the stability of the 3D printed model.

3D printing

The final STL file was printed with an Ultimaker 2 Extended 3D printer from Ultimaker BV (Geldermalsen, Netherlands) using fused filament fabrication (FFF) technology in the material of thermoplastic polyurethane (TPU) 95A. TPU 95A is a semi-flexible material with rubber- and plastic-like properties. The material was used in an attempt to mimic biliary tissue attenuation. Figure 1 is a flow chart demonstrating the steps of generating the 3D printed model from 2D DICOM data analysis to the generation of STL and 3D printing.

Figure 1.

Flow diagram showing the process of creating 3D printed model from original 2D DICOM images to STL file and 3D printing. DICOM, Digital Imaging and Communications in Medicine; STL, standard tessellation language.

The 3D printed model was scanned on a 64-slice CT (Siemens Somatom Definition AS 64, Siemens Healthcare, Forchheim, Germany) using the scanning protocol of an abdominal CT with the following parameters: 120 kVp and 176 mAs with a slice thickness of 0.75 mm resulting in voxel size of 0.56×0.56×0.56 mm³. Figure 2 shows a series of 2D axial CT images of the 3D printed model with visualization of dilated bile ducts and cyst. A supporting filler is visible inside the model that prevents the model from collapsing during the 3D printing process.

Figure 2.

CT images of the 3D printed biliary model at different anatomical locations showing dilated hepatic ducts and a huge cyst in the common bile duct. A filler material is visible inside the model to prevent it from collapsing during the 3D printing process.

Quantitative assessment of model accuracy

To ensure the model accuracy, measurements of anatomical landmarks were performed and compared at three stages of the model production, namely, the original CT images, STL file and CT images of the 3D printed model (Figure 3). The internal diameter of four anatomical locations was measured from left to right (LR) and from anterior to posterior (AP) in the following landmarks: CHD, LHD, RHD and biliary cyst. Measurements were repeated three times at each location by two independent observers with mean values used as the final ones. An excellent correlation was achieved between the two observers (r=0.99, P<0.001).

Figure 3.

An example of showing measurement of anatomical landmarks at different stages of model production. Images show measurements of the cyst diameter from left to right dimensions on original CT, STL file and CT of the 3D printed model. CT, computed tomography; STL, standard tessellation language.

Statistical analysis

Data were entered into SPSS 24.0 (IBM Corporation, Armonk, NY, USA) for statistical analysis. Continuous variables were presented as mean ± standard deviation. A paired sampled t-test was used to determine any significant differences in the measurements between original CT images, CT of the 3D model and STL images. Statistical significance was defined as a P value of less than 0.05.

Results

The model was successfully printed with excellent demonstration of normal anatomical structures of the biliary duct and the cyst (Figure 4). CT attenuation of the 3D model wall was between 40 and 80 Hounsfield Units (HU), which is close to the attenuation of soft tissue on the patient’s CT images. The total time taken to generate the 3D printed model was 2.5 hours and the printing process was 72 hours. The cost of printing the model was AUD 50.

Figure 4.

3D printed biliary model with different viewing angles. (A-D) Anterior, posterior, left and right views showing the model.

Table 1 shows measurement differences in the anatomical locations between the original CT, STL and CT of the 3D model images. Significant differences were found in measurements between the STL and original CT images, and also between the CT images of the 3D printed model and the original CT images (P<0.05). This is especially apparent in measurements of the RHD and LHD diameters with measurements from the original CT images significantly larger than those from the CT images of 3D model or STL images (P<0.05), while measurements of the CHD diameters were significantly smaller than those of the other two datasets (P<0.05). No significant differences were noted in measurements of the CHD, RHD, LHD and biliary cyst between CT images of the 3D model and STL file (P=0.08–0.98), except for measurements of the RHD at AP dimension in CT images of the 3D model which is significantly smaller than those from the STL file (P<0.05).

Table 1. Measurement differences between original CT, STL file and CT of 3D printed model.

Landmarks/comparisons	Differences (%) in measurements by Observer 1/Observer 2
	STL file compared to original CT			CT of 3D printed model compared to original CT			STL file compared to CT of 3D printed model
	LR	AP		LR	AP		LR	AP
Common hepatic duct	19.6 [7]/23.8 [4]	6.0 [2]/6.5 [2]		15.2 [3]/18.3 [3]	9.4 [3]/7.6 [2]		3.8 [6]/4.7 [6]	3.8 [7]/1.3 [2]
Right hepatic duct	23.4 [1]/23.2 [2]	19.1 [7]/18.9 [11]		24 [1]/22.9 [2]	28.8 [1]/30.9 [2]		0.80 [3]/0.16 [1]	13.6 [4]/17.3 [8]
Left hepatic duct	22.2 [3]/21.8 [1]	16.9 [5]/13.1 [4]		23.7 [6]/19.0 [6]	21.4 [1]/13.7 [3]		2.0 [3]/3.5 [1]	5.9 [2]/0.7 [2]
Biliary cyst	3.2 [2]/3.8 [3]	2.6 [3]/0.5 [1]		4.4 [3]/3.9 [4]	0.7 [1]/0.2 [1]		1.2 [1]/0.1 [1]	1.8 [1]/0.7 [1]

Numbers in the brackets indicate standard deviation. LR, left to right dimension; AP, anterior to posterior dimension; STL, standard tessellation language; CT, computed tomography.

Discussion

In this study we present our experience of creating a patient-specific 3D printed model of biliary tree and biliary cyst using CT imaging data. The 3D printed model replicates anatomical structures and pathology with high accuracy between STL and CT images of the 3D model. Significant discrepancy was found in measurements of the anatomical landmarks between the original CT images, the STL images, and the CT images of the 3D model. This indicates the potential errors introduced during image post-processing, segmentation and editing of the data, which need to be addressed in the future image post-processing processes for 3D printing.

Developments of 3D printing technique have led to increased applications in medical field with promising reports of 3D printed models to assist diagnosis, therapeutic planning and treatment of complex diseases. To our knowledge, research on 3D printing in biliary disease is limited with only a few cases reported in the current literature. Takagi et al. (26) created a 3D printed model of a patient with intrahepatic cholangiocarcinoma based on a multi-phase contrast-enhanced CT scan. The 3D printed model was found to replicate the macroscopic findings and demonstrate similar resection when compared to the resected specimen, thus was considered useful for future pre-operative simulations. In another study by Dhir et al. (27), a 3D printed prototype of a dilated biliary system was developed and evaluated for the teaching and training of endoscopic ultrasound-guided biliary drainage to endosonographers. The model was deemed suitable for the training of the four important steps of bile duct drainage and it was agreed that it simulated real-life problems. In addition, their study showed that the properties of the polycarbonate material (used to create the prototypes) closely mimicked bile duct walls on radiography and ultrasound. However, none of these studies investigated the model accuracy. This has been addressed in our study as we focused on validating model accuracy by comparing measurements acquired from different stages of model creation. Despite presence of significant discrepancies in measuring some anatomical structures between STL/CT images of the 3D printed model and the original CT images, results of this study provide additional information to the current literature about creating realistic physical models of biliary disease. Future studies with inclusion of more cases are required to confirm dimensional accuracy of the 3D printed biliary models.

A number of studies have demonstrated encouraging results of the usefulness of 3D printed liver models which serve as valuable tools for pre-surgical planning, intra-operative orientation and simulation purposes (16-20). However, a recent systemic review highlights the limited studies involving quantitative assessment of the accuracy of 3D printed liver models (21). Through analysis of five studies reporting quantitative assessment of model accuracy, the review indicates differences between the 3D printed liver model and original CT data of between 0.20% and 20.8%. The results of our study fall within this range, although some differences are close to 31% (Table 1) which is larger than those reported in the literature. However, most of the liver models created by other studies were printed at 60–70% of the original size due to high cost, while in our study a 1:1 scale model of the biliary duct and cyst was created to replicate real size of the anatomy and pathology.

There were some limitations in this study. First, only one model was generated with no qualitative assessment on the clinical value of the 3D printed biliary model. More cases with inclusion of different biliary diseases, preferably including malignant tumors are desirable as our study only included a case with benign cyst. Second, there was a possibility of inconsistency amongst the orientation and location of the measurements of each anatomical landmark between the observers and three datasets which could contribute to some large discrepancy in measurements. Measurements with consideration of all 3D planes, including axial, coronal and sagittal views in more cases are suggested in further studies to achieve more accurate and consistent results. Finally, 3D printed models are considered valuable tools in clinical practice, however, the time and cost associated with model generation and printing remain another limitation which needs to be addressed with technological improvements in 3D printers and cost reduction in printing materials as well as availability of automatic segmentation algorithms.

In conclusion, we have successfully generated a patient-specific 3D printed model of biliary system with congenital cyst. The 3D printed biliary model replicates anatomical structures of the biliary tract and the cyst with high dimensional accuracy in measurements of the cyst among these three different approaches. However, the large differences in anatomical measurements at different stages of the model production warrant further investigation. Future research is also needed to determine the clinical value of 3D printed biliary models in pre-surgical planning and simulation.

Ethical Statement: Ethical approval was obtained from Curtin University Human Research Ethics Committee (HRE20-18-0147). Informed consent was waived due to retrospective nature of the study and use of de-identified images.