Abstract
Selective targeting of drugs to tumor cells is a key goal in oncology. Here, we performed an in vivo phage display to identify peptides that specifically target xenografted prostate cancer cells. This yielded three peptide candidates, LN1 (C-TGTPARQ-C), LN2 (C-KNSMFAT-C), and LN3 (C-TNKHSPK-C); each of these peptides was synthesized and evaluated for binding and biological activity. LN1 showed the highest avidity for LNCaP prostate cancer cells in vitro and was thus administered to tumor-bearing mice to evaluate in vivo binding. Strikingly, LN1 specifically bound to the tumor tissue and exhibited very low reactivity with normal liver and kidney tissues. To demonstrate that LN1 could specifically deliver drugs to prostate cancer tissue, a therapeutic peptide, LN1-KLA (C-TGTPARQ-C-GGG-D[KLAKLAK]2), was prepared and used to treat LNCaP cells in vitro and was also administered to tumor-bearing mice. The therapeutic peptide significantly suppressed growth of the cells both in vitro and in vivo. Our study shows that a selective homing peptide strategy could facilitate cell-specific targeting of therapeutics while avoiding adverse reactions in normal tissues.
Keywords: drug delivery system, homing peptide, negative selection, phage display, prostate cancer, targeting
Introduction
Although several therapeutic options are available to treat localized prostate cancer, metastatic disease is associated with a poor prognosis in prostate cancer patients. Currently, androgen deprivation therapy is the standard treatment for metastatic prostate cancer.1 Despite the initial favorable response, many patients die once castration-resistant disease emerges.2 The development of novel drugs, such as abiraterone, enzalutamide, and cabazitaxel, has improved survival to some extent.3, 4, 5, 6 However, in many instances, treatment has to be discontinued due to the appearance of systemic adverse reactions. To overcome the limitations of these current therapies, there is a pressing need for a treatment strategy that allows selective targeting of cancer tissue while avoiding adverse effects on non-target tissues.
Homing peptides capable of selectively delivering many kinds of molecules have been identified and hold great promise for the development of less toxic therapeutic methods to treat several diseases.7, 8, 9, 10 These homing peptides usually consist of 3–12 amino acids with exceptionally strong binding affinity and selectivity for their target molecules.11, 12 These peptides can be screened using phage display technology, which is an efficient method for searching a peptide library in order to identify a sequence that specifically binds to a target molecule.13, 14 The method can be used both in vitro and in vivo;15, 16 the latter approach allows the identification of homing peptides that target the surface of cells in their physiological microenvironment.12, 16, 17, 18, 19, 20, 21 Combining these homing peptides with an anticancer agent promotes more effective tumor regression than use of the anticancer agent alone.18 In addition, conjugation of these peptides to pro-apoptotic peptide sequences can be used to selectively induce cancer cell death.19
The existing in vivo phage display technology is problematic, as it does not consistently identify peptides that discriminate disease tissue from normal tissue.22, 23 We designed the current study to address this issue. Specifically, we performed an initial phage display that identified peptides that did not bind to host tissues; this library subgroup was then used to identify peptides that homed to prostate cancer cells. Furthermore, in order to minimize toxicity to human normal tissues, we performed phage display on a cynomolgus monkey in addition to normal mice to collect phage populations that did not bind to non-diseased organs. Our approach provides an advanced strategy to isolate non-toxic homing peptides that specifically bind to cancer cells.
Results
Identification of Prostate Cancer Homing Peptides Using In Vivo Phage Display
To exclude phage binding to normal tissues, we used blood as the source of peptides that did not bind to systemic organs. Three rounds of in vivo phage display in mice and one round of in vivo phage display in a cynomolgus monkey were performed to collect this “negative” phage population (Figure 1). The DNA sequences of the isolates were analyzed; this confirmed that phage diversity was maintained (data not shown). A similar DNA analysis was performed after completion of four rounds of in vivo phage display in severe combined immunodeficient (SCID) mice with prostate cancer tissue transplantation (Figure 1). Thirty-two sequences, indicative of high-affinity binding peptides, were identified in this manner (Table 1). LN1 (C-TGTPARQ-C) and LN2 (C-KNSMFAT-C) peptides were the most frequent among the 32 candidate peptides and were found in 4 of 47 phage plaques (frequency, 8.5%) (Table 1). LN3 (C-TNKHSPK-C) and LN4 (C-SPKNILH-C) peptides were the next most frequent and were observed in 3 of 47 phage plaques (frequency, 6.4%) (Table 1). Due to their occurrence at high frequency, LN1, LN2, and LN3 were selected as candidate prostate cancer homing peptides for further experiments.
Table 1.
Amino Acid Sequence | Frequency | |
---|---|---|
LN1 | C-TGTPARQ-C | 4/47 |
LN2 | C-KNSMFAT-C | 4/47 |
LN3 | C-TNKHSPK-C | 3/47 |
LN4 | C-SPKNILH-C | 3/47 |
LN5 | C-FPSPTRT-C | 2/47 |
LN6 | C-NAGTLGR-C | 2/47 |
LN7 | C-NKEFASQ-C | 2/47 |
LN8 | C-NSANNRI-C | 2/47 |
LN9 | C-STQSTTS-C | 2/47 |
LN10 | C-APPGKSE-C | 1/47 |
LN11 | C-APKNILH-C | 1/47 |
LN12 | C-APSSSAT-C | 1/47 |
LN13 | C-ESKTPKN-C | 1/47 |
LN14 | C-FDHHTNS-C | 1/47 |
LN15 | C-GTRETLS-C | 1/47 |
LN16 | C-HAALNRS-C | 1/47 |
LN17 | C-HHSNQRQ-C | 1/47 |
LN18 | C-HRPDTRS-C | 1/47 |
LN19 | C-NRESPHL-C | 1/47 |
LN20 | C-NSRSHAI-C | 1/47 |
LN21 | C-PMPSTSY-C | 1/47 |
LN22 | C-PVTSRSD-C | 1/47 |
LN23 | C-RAWNEAP-C | 1/47 |
LN24 | C-SDRGLPS-C | 1/47 |
LN25 | C-SSKSDHS-C | 1/47 |
LN26 | C-TAYPAKA-C | 1/47 |
LN27 | C-TGAPARW-C | 1/47 |
LN28 | C-TKTGLHI-C | 1/47 |
LN29 | C-TSTAPLK-C | 1/47 |
LN30 | C-VTSPFHN-C | 1/47 |
LN31 | C-YSPRGGS-C | 1/47 |
LN32 | C-YTNPDNV-C | 1/47 |
Binding Affinity of LN1, LN2, and LN3 Peptides to Cancer Cells
To examine differences in the binding affinity of LN1, LN2, and LN3 peptides to cancer cells, each peptide was synthesized and conjugated with biotin at the N terminus before incubation with LNCaP cells for 24 h. Rhodamine (tetramethylrhodamine isothiocyanate [TRITC]) avidin D was applied and the binding ratio of LN1-LN3 peptides to LNCaP prostate cancer cells was calculated (Figure 2). Most of the cells were labeled with all three peptides (Figure 2A), whereas the control peptide (C-GPRTQTA-C, a scrambled sequence of the LN1 peptide) showed negligible signal (data not shown). The proportion of LN1 peptide bound to tumor cells was 95.1% (Figure 2B). In contrast, the binding of LN2 and LN3 peptides were 86.4% and 66.7%, respectively (Figure 2B). Fluorescent immunostaining also confirmed that LN1 bound the most avidly to tumor cells (Figure 2C). We thus conclude that the LN1 peptide is the most optimal homing peptide for specific binding to prostate cancer tissue.
In Vivo Targeting of LN1, LN2, and LN3 Homing Peptides to Prostate Cancer
LN1, LN2, and LN3 peptides were individually administered to SCID mice harboring subcutaneous LNCaP transplants and 3,3-diaminobenzidine (DAB) staining was performed to evaluate the extent of binding to tumor tissues and other major organs with high blood perfusion rates, such as liver and kidney. While LN1, LN2, and LN3 peptides bound to tumor tissue, the control peptide showed negligible binding (Figure 3). Strikingly, the LN1 and LN2 peptides did not bind to the liver or kidney tissue (Figure 3). Although the peptide showed a small but significant amount of binding to the kidney tissue, it did not bind to the liver (Figure 3). On the other hand, the control peptide bound to both liver and kidney tissue (Figure 3). Given the results of the in vitro and in vivo experiments, we selected LN1 for further experiments to determine its potential utility for treatment of prostate cancer.
LN1 Homing Peptides Localize to Prostate Cancer Cells In Vivo
We performed fluorescent staining to determine the localization of LN1 in each tissue. The LN1 peptide displayed strong localization to tumor tissue, whereas the control peptide exhibited little binding (Figures 4A and 4B). Moreover, binding of LN1 to tissues in major organs such as the liver and kidney was much lower than that observed with the control peptide (Figure 4B). Colocalization of LN1 with prostate-specific antigen (PSA) antibody confirmed that the peptide was bound to tumor cells (Figure 5).
LNCaP Proliferation Is Inhibited by an LN1-Pro-apoptotic Peptide Fusion
To ascertain whether homing peptides have potential as vehicles for targeted drug delivery therapy, we determined whether a fusion construct composed of the pro-apoptotic peptide D(KLAKLAK)2 and the LN1 peptide could induce death in LNCaP cells. The pro-apoptotic peptide is known to cause mitochondrial disruption and induce apoptotic cell death. No change in cell morphology was observed following treatment with control-KLA peptide or KLA peptide, but significant cell death was induced by the LN1-KLA peptide (Figure 6A). Proliferation was inhibited by 25 μM LN1-KLA peptide but not by the same concentration of control-KLA peptide or KLA peptide (Figure 6B).
LN1-Apoptosis Fusion Peptide Inhibits the Growth of Prostate Cancer Xenografts
Following in vivo administration of phosphate-buffered saline (PBS), KLA-peptide, or control-KLA, the tumors displayed heterogeneity in ultrasound imaging (Figure 7A), indicating that viability was not affected. On the other hand, the LN1-KLA peptide induced tumor homogeneity, which was indicative of apoptosis or necrosis (Figure 7A). Whereas the tumors in control-treated mice grew 2-fold over the 22-day period, growth was reduced to 1.4-fold in mice treated with LN1-KLA peptide (Figure 7B).
Discussion
In this study, we used phage display technology to identify a homing peptide that targets human LNCaP xenografts. The LNCaP cell line isolated from a lymph node metastasis from a prostate cancer patient.24, 25 It expresses relevant markers of prostate cancer cells, such as PSA, prostate-specific membrane antigen, androgen receptor, and prostatic acid phosphatase.24, 25 Indeed, our primary motivation for using this cell line was to provide proof of principle that earlier stages of metastatic prostate cancer could be treated by using homing peptides.
In vitro and in vivo phage displays have previously identified specific peptides that selectively bind to prostate cancer cell lines.26, 27 However, peptides identified using in vitro phage display may not actually reach tumor cells in an in vivo context. To overcome this issue, we decided to perform in vivo phage displays and isolate sequence that were present in the blood, since by definition these represent peptides that can pass through the general circulation.
In 2006, Newton et al.22 identified peptides that bound selectively to prostate cancer cells, using in vivo phage display. Although the peptide bound to the prostate cancer tissue, it was also present at significant levels in the liver. Similarly, in 2011, Askoxylakis et al.,23 using in vivo phage display, identified peptides that selectively bound to PC3 cells and suggested that such peptides conjugated with 125I could be exploited for radiological diagnosis of prostate cancer. However, the radiolabeled homing peptide bound more avidly to kidney tissue than to prostate cancer tissue. Thus, promiscuous binding to other major organs such as the liver and kidney remains a serious limitation for such peptides. On the other hand, in 2002, Arap et al.12 performed an in vivo phage display in humans and identified a peptide with high binding affinity for human prostate tissue. A therapeutic construct of this peptide fused to a pro-apoptotic peptide was then administered to patients with advanced human prostate cancer. Although a certain therapeutic benefit was achieved, dose-limiting toxicity due to relatively high-grade renal dysfunction is a serious issue.28 Identifying peptides that do not bind to non-diseased tissues is therefore paramount. In order to avoid the ethical concerns associated with phage display in humans, we conducted part of our study in a cynomolgus monkey as a surrogate primate species. This approach identified peptides that do not bind to liver or kidney tissue and paves the way for investigation of novel strategies for screening effective homing peptides. We further validated our approach by showing that the homing peptides can be used to specifically target death-inducing pro-apoptotic peptides to tumor cells in vitro and in vivo.
In order to confirm the application of the identified peptide for the treatment, an experiment was conducted in which it was conjugated with a proapoptotic peptide (D[KLAKLAK]2) and administered to tumor cells and tumor-bearing mice for treatment in this study. It binds to cell surface and causes cell death by disrupting mitochondrial cell membranes.29 It has been reported that a concentration of approximately 300 μM is required to induce cell death, accompanied by morphological change of cells in eukaryotes when proapoptotic peptide is administrated alone.19 Here, we observed cell death accompanied by a morphological change by inducing LN1-KLA peptide to prostate cancer cells and found that the LN1 peptide can efficiently transport apoptosis-inducing peptide to prostate cancer cells. Furthermore, LN1-KLA peptide significantly inhibited tumor growth, both in vitro and in vivo, as compared to the control peptide, and it was considered to be very useful as a carrier for therapy.
We conclude that the LN1 peptide is a selective and safe carrier for various therapeutic agents and that our homing peptides screening strategy will be very useful for identifying specific carriers that can be used for drug delivery to treat multiple diseases.
Materials and Methods
Animals
C57BL/6 mice and severe combined immunodeficient male CB17/Icr-Prkdcscid/CrlCrlj (C.B-17 SCID) mice were purchased from Charles River Laboratories (Osaka, Japan). The cynomolgus monkey was a gift from the Research Center for Animal Life Science in Shiga University of Medical Science.
C.B-17 SCID mice were used for all xenograft experiments with the human prostate cancer cell line. All mice were housed under standard conditions in the Institutional Animal Care and Use Committee (IACUC) at Shiga University of Medical Science and food and water were provided ad libitum. All animal experiments were conducted according to the guidelines of the IACUC at Shiga University of Medical Science.
Cell Culture
The human prostate cancer cell line LNCaP (RCB2144) was provided by the RIKEN BioResource Research Center (BRC) through the National BioResource Project of the Ministry of Ministry of Education, Culture, Sports, Science and Technology/Japan Agency for Medical Research and Development (MEXT/AMED) (Ibaraki, Japan) and cultured in RPMI-1640 medium (Thermo Fisher Scientific, Waltham, MA, USA) with 10% fetal bovine serum (Thermo Fisher Scientific) at 37°C in an incubator with 5% CO2 and 95% air.
LNCaP Xenograft Model in C.B-17 SCID Mice
Culture medium (250 μL) containing 2 × 106 LNCaP cells were mixed with 250 μL Matrigel (Corning, Corning, NY, USA). In order to generate prostate cancer xenografts, we injected the mixture subcutaneously into the back of 6- to 8-week-old C.B-17 SCID mice, using a 25-gauge needle. Mice were monitored weekly to monitor tumor growth.
In Vivo Phage Display and Screening of Prostate Cancer Cell Homing peptides
The M13 phage library (Ph.D.-C7C) was purchased from New England Biolabs (Ipswich, MA, USA) and was used for in vivo phage display to screen prostate cancer cell homing peptides. The method of phage display was performed according to the protocols described by Christianson et al.,30 with minor modifications. The phage library was injected into C57BL/6 mice through the tail vein at a titer of 1 × 109 plaque-forming units (PFU)/μL in 100 μL Tris-buffered saline (50 mM Tris-HCl [pH7.5]). Five minutes after the injection, blood was recovered from the heart in order to remove non-specifically bound phages. The collected blood was dissolved in DMEM (Thermo Fisher Scientific) containing protease inhibitor (Sigma-Aldrich, St Louis, MO, USA). The solution was introduced into Escherichia coli ER2738 (New England Biolabs), and the number of phages in the blood was titrated by plaque-forming units. After amplification to 1 × 1011 PFU, the phages were injected into new C57BL/6 mice. After three rounds of in vivo panning with mice, the phages were injected into the femoral vein of a 15-year-old female cynomolgus monkey. Five minutes after the injection, blood was taken from the femoral vein and dissolved in DMEM with protease inhibitor. The solution was centrifuged to collect the serum, from which phages were amplified to 1 × 1011 PFU.
These phages were injected into the tail vein of a C.B-17 SCID mouse with tumor xenografts, and xenografted prostate cancer tissue was isolated after trans-cardiac removal of blood. Phages were recovered from the homogenized tissue and amplified as described above. Three additional cycles of in vivo phage panning were performed. After four cycles of in vivo panning in C.B-17 SCID mice, phage DNA was isolated from selected phage plaques with high affinity to prostate cancer tissue. The DNA sequence encoding the pIII protein was analyzed in order to identify homing peptides that localize to prostate cancer tissue.
Evaluation of Homing Peptide Binding Affinity to LNCaP Cells In Vitro and In Vivo
LN1 (C-TGTPARQ-C), LN2 (C-KNSMFAT-C), and LN3 (C-TNKHSPK-C) peptides were synthesized and modified by a biotin molecule attached to their N termini (Invitrogen, Carlsbad, CA, USA). Control peptide (C-GPRTQTA-C), containing a scrambled version of the amino acid sequence of the LN1 peptide, was synthesized as a control.
For in vitro experiments, LNCaP cells (5 × 104 cells per well) were cultured in 24-well plates for 24 h in DMEM with 10% fetal bovine serum. Each biotinylated peptide was added to LNCaP cells at a concentration of 1 μg/mL in 200 μL culture medium. After incubating LNCaP cells with these peptides at 37°C for 5 min, the cells were washed with PBS, to remove the unbound biotinylated peptides, and fixed with 4% paraformaldehyde. Then each sample was blocked with PBS containing 5% normal goat serum and incubated with Rhodamine Avidin D (Vector Laboratories, Burlingame, CA, USA) to visualize the biotinylated peptide. TRITC-positive cells were observed using a confocal laser microscope (FV1000-D; Olympus, Tokyo, Japan) with FLUOVIEW software version 4.01 (Olympus) and counted in each well; averages were for each peptide group. Fluorescence intensity was measured and quantified by ImageJ 1.51 (NIH, Bethesda, MD, USA). These experiments were performed in triplicate.
For in vivo experiments, 150 μg LN1, LN2, or LN3 peptide or control peptide was dissolved into 100 μL PBS and administered through the tail vein to individual tumor-bearing mice under general anesthesia. Five minutes after the administration, xenografted prostate cancer tissue, liver, and kidney were isolated after transcardial perfusion fixation with 4% paraformaldehyde. Sections prepared from liver, kidney, and tumor tissues were processed via DAB (Vector Labs, CA, USA) staining in order to evaluate the binding affinity of biotinylated peptides to these tissues in vivo. For fluorescent staining, the sections of prostate cancer tissue from LN1 and control groups were incubated with anti-PSA primary antibody (GeneTex, Irvine, CA, USA) overnight at 4°C. After the primary antibody was washed out, those sections were incubated with species-matched AlexaFluor-488 conjugated secondary antibody (Thermo Fisher Scientific) and Rhodamine Avidin D. Sections of liver and kidney tissues from the LN1 and control groups were also incubated with Rhodamine Avidin D. All sections were observed using a confocal laser microscope (C1si; Nikon, Tokyo, Japan), with EZC1 software version 3.90 (Nikon). Fluorescence intensity was measured and quantified by ImageJ 1.51 (NIH, Bethesda, MD, USA). In vivo experiments were conducted using three mice in each peptide group.
Cell Viability Assay
C-TGTPARQ-C (LN1)-GGG-D(KLAKLAK)2 (LN1-KLA peptide), C-GPRTQTA-C (control peptide)-GGG-D(KLAKLAK)2 (control-KLA peptide), and D(KLAKLAK)2 (KLA peptide) were synthesized by Invitrogen (Carlsbad, CA, USA). LN1 or control peptide and proapoptotic peptide (D[KLAKLAK]2) were linked by a glycinyl-glycinyl-glycine bridge. Therefore, homing peptide (LN1 or control) and D(KLAKLAK)2 domains could independently move around the glycine bridge, because the glycine residue has no polarity. LNCaP cells were seeded in 96-well plates at a density of 1 × 104 cells per well and cultured in RPMI-1640 medium with 10% fetal bovine serum 24 h before the assay. The cells were incubated with different concentrations of the LN1-KLA fusion peptide, the control-KLA fusion peptide, or the KLA peptides for 48 h. Cell viability was measured using the WST8 assay (Dojindo, Kumamoto, Japan).
Treatment of Tumor-Bearing Mice with Homing Peptides
Immunodeficient mice injected under the dorsal skin with LNCaP cells were observed for approximately 2 months until tumor volume reached about 150 mm3. Then, LN1-KLA peptide, control-KLA peptide, and KLA peptide were administered via the tail vein to individual mice at a concentration of 150 μg dissolved in 100 μL PBS once every 2 days for 3 weeks.
Body weight and tumor size were measured periodically during the 3 weeks, and the tumor volume was measured using the Vevo 2100 (Visualsonics, Toronto, Canada), a small-animal imaging analysis system. This experiment was performed with six mice in each peptide group, and tumor sizes were compared between each peptide group.
Statistical Analysis
All in vitro experiments were performed in triplicate. In vivo analyses were performed in three to six mice per group, with the exact number shown in the figure legends. Data are expressed as the mean ± standard deviation (SD). Student’s t tests were performed to determine the significant differences between two groups. For multiple datasets, the differences were determined by one-way ANOVA followed by the Tukey’s test. p < 0.05 was considered statistically significant.
Author Contributions
A.W. performed the experiments, statistically analyzed the data, and drafted the manuscript. T.T. advised on the experimental procedures, designed the study, and helped to draft and revise the manuscript. H.K. and S.K advised on experimental design and techniques and revised the manuscript. A.K., M.N., and T.Y. provided expertise and feedback. All authors read and approved the final manuscript.
Conflicts of Interest
The authors declare no competing interests.
Acknowledgments
We gratefully acknowledge the work of all those who helped us during this study. We would like to thank the Central Research Laboratory, Shiga University of Medical Science, for technical support. This work was supported by Japan Society for the Promotion of Science (JSPS) KAKENHI grant number JP16K11001.
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