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Integrative Medicine: A Clinician's Journal logoLink to Integrative Medicine: A Clinician's Journal
. 2018 Feb;17(1):38–48.

Probiotics and Disease: A Comprehensive Summary—Part 8, Gastrointestinal and Genitourinary Disorders

Heather J Finley 1,, Margaret G Gasta 1, Keren E Dolan 1, Jessica M Pizano 1, Crystal M Gossard 1, Christy B Williamson 1, Cathleen M Burns 1, Emily C Parker 1, Elizabeth A Lipski 1
PMCID: PMC6380984  PMID: 30962775

Abstract

This article series provides a literature review of the disease-specific probiotic strains associated with gastrointestinal and genitourinary disorders studied in published clinical trials in humans and animals. This is not an exhaustive review. The table design allows for quick access to supportive data and will be helpful as a guide for both researchers and clinicians. The goal of the probiotics and disease series is to provide clinically useful tools. The first article (part 1) focused on mental health and neurological conditions; the second article (part 2) explored cultured and fermented foods that are commonly available in the United States; the third article (part 3) explored the relationship between bacterial strains and 2 of the most prevalent diseases we have in modern society: cardiometabolic disease and fatigue syndromes; the fourth article (part 4) elucidated the role of the microbiome in infectious diseases; the fifth article (part 5) explored respiratory conditions of the ears, nose, and throat; and the sixth article (part 6) explored the relationship between beneficial microbiota and skin disorders. The seventh article (part 7) reviewed the relationship between beneficial microbiota and autoimmune diseases, allergies, asthma, and other immunity-related disorders. This article (part 8) will explore the unique relationship between bacterial strains and gastrointestinal and genitourinary diseases associated with dysbiosis. Future articles will review the influence of the microbiome on cancer development and prognosis, followed by an article focused on probiotic supplements. This literature review is specific to disease condition, probiotic classification, and individual strain.


We investigated disease-specific probiotic strains associated with gastrointestinal and genitourinary diseases such as irritable bowel syndrome (IBS), Crohn’s disease, Helicobacter pylori, bacterial vaginosis, Candida albicans, cystitis, prostatitis, and chronic kidney disease (CKD). This is not an exhaustive review.

The purpose of this summary is to provide nutritionists and other medical practitioners with a reference guide for recommending health-promoting commercially produced cultured and fermented food products to patients. There is considerable research on the gut microbiome and role of probiotics; however, this research has not been clearly connected with clinical practice. The authors undertook a review of current literature to explore which specific probiotics and probiotic strains have been utilized in clinical and laboratory studies.

To make this clinically valuable, product names of probiotics and fermented foods have been included. Finished products vary between manufacturers; thus, the researchers included brand listings to provide transparency and to facilitate a functional probiotics guide for clinicians. Exclusions of products meeting our criteria do not imply that these products are not effective—we simply were not aware of them.

Methodology

This literature review originated from a group project that was part of the requirements for a course in the doctoral program in functional and clinical nutrition at Maryland University of Integrative Health (Laurel, MD, USA). The student researchers had approximately 2 months to review the literature and synthesize the paper. The authors agreed on format, templates, and execution. Each author researched and wrote sections reviewing probiotics in relation to various health conditions with literature searches conducted in PubMed, Biomed Central, EBSCO Research Premier, PLoS One, Cochrane reviews, and topic-specific open-source journals.

The review of specific probiotic products in the professional marketplace and specific probiotics products was performed using Internet searches, primarily Shop Google, in addition to topic specific databases to search for specific probiotic species including the strains listed in the research. Novel strains were cross-referenced to determine whether the strain was available only for research purposes. If a probiotic combination was used in the research, formulas that closely matched the combination were included. Formulas that contain all or most of the specific probiotics and strains were also included. The food survey focused on bacterial strains in food and includes foods that are commercially produced and commonly available in the refrigerated sections of grocery stores in the United States. Information was gleaned from commercial Web sites, communications with food company personnel, and by visiting grocery stores (primarily in California).

Gastrointestinal diseases such as celiac disease, IBS, parasites, and Crohn’s disease may be directly impacted by perturbation of the bacterial microflora. For more than a century, probiotics have been utilized clinically to help restore normal bacterial microflora and promote proper functioning of the gastrointestinal tract; however, they have been extensively researched in only recent years. Their use in the treatment and prevention of disease has provided many insightful clinical applications, which are summarized in this review. Probiotics have been clinically studied in Crohn’s disease, IBS, celiac disease, and other disorders. The results of these studies are summarized in the tables.

Research Overview: Gastrointestinal Disease

Efficacy of probiotic compounds has been shown in a wide range of gastrointestinal diseases including gastric ulcers, IBS, ulcerative colitis, celiac disease, and other inflammatory bowel diseases. Lactobacillus GG alone, or in the combination of Bifidobacterium bifidum and Streptococcus thermophilus, is effective in the treatment of Clostridium difficile. Probiotics have been used to prevent antibiotic induced diarrhea.1

Pouchitis is a common complication in patients undergoing restorative proctocolectomy for ulcerative colitis. Probiotics and prebiotics in the treatment of these patients has been proved effective when the probiotic strains Bifidobacterium, Lactobacillus, and Saccharomyces boulardii are utilized.2 VSL#3 is a common probiotic utilized for ulcerative colitis patients.3 Profermin is also effective in reducing remission in ulcerative colitis.4

In patients with celiac disease, Bifidobacterium infantis provided improvement in symptoms of indigestion and constipation; Bifidobacterium also produced some immunologic changes but was not successful in modifying intestinal permeability.5 Bifidobacterium breve has shown a positive effect on increasing the production of proinflammatory cytokine tumor necrosis factor alpha in children with celiac disease.6 Several strains of Lactobacillus (paracasei, rhamnosus) show potential for the treatment of celiac disease and preventing undigested gliadin peptides toxic effects.3

In the treatment of parasites, Bifidobacterium animalis had an immunomodulatory action, whereas Lactobacillus casei and Enterococcus faecium were both effective at eliminating giardia infection.7,8 In addition, Aymomonas mobilis was reported to provide 60% protection from the infection of Schistosoma masoni in mice.7

Lactobacillus johnsonii, Saccharomyces boulardii, Lactobacillus acidophilus, and Bifidobacterium lactis were all proven effective in treating H pylori. L johnsonii was found effective in inhibiting adhesion of H pylori to gastric epithelial cells and several studies have recommended S boulardii or Lactobacillus species in combination with standard triple therapy.9

Unfortunately, most studies show there is no efficacy for probiotics in Crohn’s disease treatment at this time.2,3

The treatment of small intestinal bacterial overgrowth (SIBO) can be improved with probiotics. Bifidobacterium triple viable capsule, B bifidum, B lactis, Bifidobacterium longum, L acidophilus, Lactobacillus rhamnosus, L casei, and Streptococcus thermophilus are all beneficial for SIBO. There are data that show a good outcome with sequential antibiotic probiotic/prebiotic administration in patients with SIBO.10-12 In patient with diarrhea-predominant IBS, dual coating capsules containing 5 billion bacteria were utilized for 4 weeks. Results indicated a significant improvement in intestinal microbiota and overall discomfort when compared with the group utilizing noncoated probiotics. Multistrain probiotics have been found best for IBS.13

It is evident that a variety of probiotic strains are helpful in combating gastrointestinal diseases, and more research is needed to evaluate other strains. The natural microbes can be found in foods as well as supplements that come in pills, capsules, powders, and liquids. Each strain has a different effect on the microbiome and offer clinical improvement for patients with IBS, ulcerative colitis, antibiotic-associated diarrhea, parasites, and SIBO with minimal risk or adverse side effects.

Research Overview: Genitourinary

The use of probiotics for maintaining genitourinary health in males and females may be a cost-effective alternative treatment for those suffering from a variety of recurring genitourinary infections. For women, most Lactobacillus strains applied topically and containing more than 1 billion colony-forming units (CFUs) showed positive results with most bacterial vaginosis and Candida infections.20 One in vivo study on toxic shock syndrome showed that probiotics adhered immediately to the virulent bacterial toxins produced by Staphylococcus aureus.21 Recurrent urinary tract infections (UTIs) have been associated with depletion of vaginal Lactobacillus, and Stapleton et al22 showed that the use of vaginal suppository of Lactobacillus crispatus was associated with a reduction of recurrent UTIs in women.

In men, the link between the gut microbiota and prostatitis is just now being recognized and explored in the literature, and VSL#3 combined with rifaxin to address the gut microbiota helped to greatly decrease chronic prostatitis.23

CKD is another area where probiotics may favorably affect the outcome of disease by influencing the microbiota. The intestine and the kidney influence each other’s health in a complex bidirectional manner.24 The intestine generates protein-bound uremic toxins, p-Cresol, and indoxylsulfate. Uremia then many cause structural and functional changes in the intestine including bacterial translocation, increased gut permeability, and generation of protein-bound uremic toxins that lead to inflammation that, in turn, causes increased morbidity and mortality in CKD and non-CKD populations.24 Intestinal dysbiosis may be associated with increased uremic toxin level that may contribute to the progression of CKD.25 The intestinal microbiota in CKD patients is altered with lower levels of Lactobacillus and Prevotella species, and 100 times higher with Enterobacteria and Enterococci species.25 Kidney disease is associated with factors that cause intestinal dysbiosis, including decreased fiber intake, higher antibiotic use, slower colon transit time, metabolic acidosis, volume overload with intestinal wall congestions, intestinal wall edema, and oral iron intake.25 Therefore, targeting the gut microbiota with a lower protein diet and prebiotics and probiotics will help to generate fewer uremic toxins may be a credible adjuvant approach for addressing CKD and the associated high morbidity and mortality.25

There is only a small body of pilot research on the utilization of probiotics in people with CKD. According to Rossi et al,26 the studies that have been done on evaluating the effects of probiotics on CKD have been poorly designed, often did not have a control group, the strains were not been selected with any clear rationale, and for the most part have shown a poor outcome on urea levels and uremic toxins. Furthermore, the population that might benefit the most, the predialysis population, has not been targeted for studies.26 A pilot study of 25 people with PKD included some in stage III, with creatinine levels of 1.7, compared with other studies with only people in stages IV to V CKD. This cross-over study compared the effects on a probiotic supplement containing Streptococcus thermophilus (KB19), L acidophilus (KB27), and B longum (KB31) in subjects with diabetes versus people with CKD who did not have diabetes. Placebo and probiotic were each taken for 3 months. All subjects had reductions in blood urea levels. Only subjects without diabetes had significant stabilization or reductions in glomerular filtration rate (GFR). Approximately 54% of subjects with diabetes were taking chronic antibiotics for neurologic bladder, which may have attributed to the nonsignificant changes in GFR in the subjects with diabetes.27

At this time, no strains of probiotics have been identified that produce definite benefits in CKD patients. A study in rats showed that Bacillus pasteuri and Lactobacillus sporogenes decrease BUN and serum creatinine. L casei Shirota in high doses of 16 billion decreased BUN by 11% but not creatinine. L acidophilus and B longum have shown a borderline decrease in BUN in only 40% of subjects.26 A recent study analyzing National Health and Nutrition Survey (NHANES) data found that frequent consumption of yogurt and or probiotics use was associated with decreased risk of proteinuria kidney disease.25

As antibiotic resistance increases, it is important to consider having cost effective, evidence-based alternative treatments available such as the use of certain probiotic strains for specific recurring genitourinary infections. The use of probiotics for maintaining the health of the genitourinary tract warrants continued research.

Nutritional Supplements Overview

Professional and commercial dietary supplements containing probiotics are widely available.37-42 In 2002, it was estimated that more than 100 companies in the United States marketed probiotic supplements, and nearly 2 million adults consume them regularly.38 In 2012, probiotic or prebiotic use was the third most commonly used nonvitamin, nonmineral dietary supplement, and global sales were projected to reach to $42 billion by the end of 2016.39 Using probiotics for general health versus targeting a specific health concern is more complex as the properties of probiotic species are strain specific.40 Unfortunately, research models lack consistency in naming therapeutic strains while in addition, specific strains are often not listed on supplement labels. This challenge prevents the practitioner from distinguishing the researched strain from the supplemental product and is a limitation of these tables. If the researched strain was not readily available on the label or marketing material, the brand, potentially containing the strain, was not included in the table.

The Joint Food and Agriculture Organization of the United Nations/World Health Organization Expert Consultation on Evaluation of Health and Nutritional Properties of Probiotics developed guidelines for evaluating probiotics in food. A combination of phenotypic and genotypic tests must be performed to determine the strain; however, regulations on species identification is not in place and supplement companies are not required to list this information on labels. During this multiseries review, it was identified that 30 species were specifically isolated for research purposes and were unavailable and another 56 strains were not commercially available. Due to the wide variety of formulations on the market, lack of knowledge, and poor labeling, it is difficult for practitioners and consumers to determine which brand contains specific strains researched to address a particular health concern.

This table is designed to be a resource to see what is available “at-a-glance.” The brands were chosen by searching the probiotic strain and strain-species in Google, several supplement companies, Probiotics Advisor,41 and the Clinical Guide to Probiotic Products.42 Based on the results and to determine what was commercially available, the search was refined using Google Shopping. In some instances, the supplement company was called to determine whether the formula contained a specific species.

Table 1.

Gastrointestinal Disorders

Gastrointestinal Infections Strains Overview Professional and Commercial Products Foods
Celiac Disease
Smecuol et al5 (2013);
Klemenak et al6 (2015)


Smecuol et al5 (2015);
Lorenzo et al14 (2015)

Sarno et al15 (2014)
Durchschein3 (2016)
B infantis NLS,
B breve BR03,
B breve B632,
B longum CECT 7347

L rhamnosus,
L paracasei

L paracasei CBA L74 & P31-43
In patients with celiac disease, B infantis NLS provided improvement in symptoms of indigestion and constipation; produced some immunologic changes but did not modify intestinal permeability B breve BR03; B breve B632 has shown a positive effect on decreasing the production of pro-inflammatory cytokine TNF-α in children with celiac disease on gluten-free diet.

B longum CECT7347 produces minimal changes in gut microbiota with gluten-free diet.

Lactobacillus shows high percentages of autoaggregation and Lactobacillus shows high hydrophobicity. which makes them potential for treatment associated with celiac disease.

L paracasei CBA L74 & P31-43 prevent undigested gliadin peptides toxic effects.

Precaution: When probiotics are used, the risk of bacterial translocation and subsequent bacteremia has to be considered.
B breve, B longum, L rhamnosus, L paracasei: Renew Life Ultimate Flora Extra Care 50 Billion

B infantis NLS: Natren Life Start Probiotics for Infants and Life Start Vegan, Natren

B breve BR03
Bifidus Balance+FOS (Jarrow Formulas)

B breve BR03 and B632 (Bifibaby, Probiotical Spa)

B longum CECT 7347 (not available)

L rhamnosus (common in multistrain options)

L rhamnosus with FOS (Swanson Ther-Biotic Factor 1, Klaire Labs)

Gr8-Dophilus (NOW Foods)

L paracasei CBA L74 & P31-43 (not available)
B infantis NLS: None

B breve BR03: None

B breve B632,
B longum CECT 7347,
L rhamnosus: Kevita kombucha drinks, yogurt

L paracasei: Kevita probiotic drinks, Wallaby organic cow’s milk yogurt

L paracasei CBA L74 & P31-43: None
Parasites
Ribeiro et al8 (2016);
Berrilli et al7 (2012)
B animalis subsp lactis

L casei MTCC

E faecium SF68
The probiotic B animalis had an immunomodulary action, inducing CD19 lymphocyte proliferation. and consequently increasing anti-T gondii antibody level-B provided protection in supplemented mice.

L casei and E faecium were both effective at eliminating Giardia infection.

Oral treatment of L casei appears to reduce the parasite burden T spiralis in mice.

E faecalis has inhibitory activity against Gram-positive and Gram-negative bacteria.

A mobilis was reported to provide 60% protection from the infection of S mansoni in mice.
B animalis subsp lactis (HLC Maintenance, Pharmax)

L casei MTCC (not available)

E faecium SF68 (not available)
B animalis lactis, DN-173 010/CNCM

I-2494: Activia yogurt

L casei MTCC: None

E faecium SF68: None
H. Pylori
Khoder et al9 (2016)
L johnsonii,
S boulardii,
L acidophilus,
B lactis
L johnsonii inhibits adhesion of H pylori to gastric epithelial cells in vitro.

Meta-analytic studies have recommended the use of either S boulardii or Lactobacillus species supplementation in combination with the standard triple therapy.
L johnsonii (not available)

S boulardii
(Jarrow Formulas, Biotics Research, Ortho Molecular Products, Klaire Labs, Bronson Vitamins, Pure Encapsulations, Nutricology, Kirkman Labs, Thorne Research)

L acidophilus and B lactis (widely available in commercial formulas)

Gr8-Dophilus (NOW Foods, Ther-Biotic Factor 4: Bifidobacterium Complex, Klaire Labs, Dr Formulated Probiotics—various formulas, Garden of Life, Ultimate Flora Extra Care Probiotic, Renew Life)
L johnsonii: Milk and fermented dairy products

S boulardii: None

L acidophilus: Lassi, kefir, yogurt

B lactis: Almond Dream nondairy yogurt, Nancy’s Organic cultured soy, goat milk yogurt, vow’s milk lassi, Nancy’s Organic cow’s milk kefir
Crohn’s Disease
Durchschein et al3 (2016);
Lichtenstein et al2 (2016)
There is no evidence for efficacy of probiotics in Crohn’s disease. None None
Bariatric Surgery
Tarplin16 (2015)
Both pyridoxine and probiotics have been shown in small studies to reduce hyperoxaluria.
SIBO
Liang11 (2016)

Kwak et al10 (2014)

Rosania et al12 (2013)
Bifidobacterium triple viable capsule, B bifidum

B lactis,
B longum

L acidophilus,
L rhamnosus,
S thermophilus,
L casei
Bifidobacterium triple viable capsule was effective in combatting SIBO and was associated with a significant improvement in gastrointestinal cancer related symptoms.

Short-term probiotic administration is effective in alleviating SIBO and clinical symptom.

Data show a good outcome with sequential antibiotic/probiotic/prebiotic administration in patients with SIBO.
B bifidum, B lactis, B longum,
L acidophilus, L rhamnosus,
S thermophilus, and L casei are formulated together in the following brands:

Nexabiotic (Bioprosper Labs)

Mega Probiotic-ND
(Food Science)

Mega Flora Plus (Mega Food)

Iflora Multi-Probotic Formula (Sedona Labs)

ProBiota 12 (Seeking Health)

Sehat Probiotic (Trivedi)
B triple viable capsule: None

B bifidum: Kefir, All yogurt containing “live and active cultures”

B lactis: Almond Dream nondairy yogurt, Nancy’s Organic cultured soy, Goat milk yogurt, Cow’s milk lassi, Nancy’s Organic cow’s milk kefir

B longum: None

L acidophilus: Lassi, kefir, yogurt
L rhamnosus: None

S thermophilus: lassi, kefir, all yogurts

L casei: Nancy’s Organic cow’s milk yogurt, all kefirs
Ulcerative Colitis
Durchschein et al3 (2016);
Lichtenstein2 (2016);
Rembacken et al17 (1999);
Matthes et al18 (2010);
Krag4 (2013);
Orel et al19 (2014)
E coli Nissle 1917,
B breve VSL,
B infantis VSL,
B longum VSL,
L acidophilus VSL,
L delbrueckii subp
bulgaricus VSL,
L paracasei VSL,
L plantarum VSL,
S thermophilus VSL,
L plantarum 299v,
B clausii
(enterogermina),
L casei Shirota,
S cerevisiae variety boulardii,
L casei CRL 431,
L acidophilus CRL-730
For patients with pouchitis, antibiotics treatment followed by VSL#3 or Lactobacillus GG is effective.

Prebiotic inulin is capable of reduction of mucosal inflammation in patients with subclinical chronic pouchitis.

When treated with nonpathogenic E coli, time to remission and duration of remission was equivalent to a group treated with corticosteroid.

Probiotic enemas resulted in dose-dependent remission rate.

Supplementation with profermin is safe, well tolerated, palatable, and able to reduce SCCAI scores at a statistically and clinically significant level in patients with mild-to-moderate ulcerative colitis with a flare-up.

VSL#3 and E coli Nissle 1917 provide strong clinical evidence for the treatment of active ulcerative colitis.
E coli Nissle 1917 (Mutaflor Tribute Pharmaceuticals)

VSL#3 for ulcerative colitis2

Culturelle (Digestive Health)

Culturelle Immune Health (Klaire Labs)

Culturelle (Metagenics)

Ultra Flora Intensive Care (Jarrow Ideal)

Bowel Support 299v (Ther-Biotic Factor)
4 Bifidobacterium Complex 60c by Klaire Labs (B breve)
Strains in VSL: None

L plantarum 299v: Good Belly Probiotic Foods

Bacillus clausii: None

L casei Shirota: Yakult

S cerevisiae variety boulardii,
L casei CRL-431,
L acidophilus CRL -730: None
Irritable Bowel Syndrome
Han et al13 (2016)
L plantarum 299v,
B animalis subsp lactis DN-173-010,
B infantis 35624,
L fermentum VRI-003,
L plantarum 299v

L acidophilus VSL,
S thermophilus VSL,
B infantis VSL,
B breve VSL,
L paracasei VSL,
B bifidum CUL-20,
B lactis CUL-34,
L acidophilus CUL-21,
L acidophilus CUL-60,
L rhamnosus GG,
E coli Nissle 1917
Dual-coating layers of probiotic supplement (Bifidobacterium) can be candidate for treatment of diarrhea-predominant IBS. Magnetic Clay Inc Prescript Assist

Genestra HMF Pre+Probiotic Pharmax HLC Immunity+Pro Genestra

Multi+Pro F Genestra

Multi+Pro F50+Genestra Multi+Pro M

Genestra Multi+ProM50+Sigma Tau VSL#3 (Metagenics)

Ultra Flora Intensive Care (Jarrow Ideal)

Bowel Support 299v (Pharmanex ProBio PCC, Procter & Gamble Align, Danone Activia, GoodBelly Probiotic Drink Range, Ther-Biotic Factor4)

Bifidobacterium Complex) 60c by Klaire Labs (B breve)
L plantarum 299v: GoodBelly Probiotic Products

B animalis subps lactis DN-173-010: Activia Yogurt

B infantis 35624: None

L fermentum VRI-003: None

L plantarum 299v: GoodBelly Probiotic Products

VSL Strains: None

B bifidum CUL-20,
B lactis CUL-34,
L acidophilus CUL-21,
L acidophilus CUL-60,
L rhamnosus GG,
E coli Nissle 1917: None

Abbreviations: IBS, irritable bowel syndrome; SIBO, small intestinal bacterial growth;

Table 2.

Genitourinary Disorders

Genitourinary Strains Overview Professional and Commercial Products Foods
Bacterial Vaginosis
Coudeyras28 (2008)

Mastromarino et al29 (2009)

Mastromarino20 (2013)

Parolin et al30 (2015)

Vicariotto31 (2014)
L rhamnosus,
L reuteri (vaginally)

L brevis + L salivarius + L plantarum

L acidophilus + estriol
Most clinical trials using 1 billion CFU of any lactobacillus species applied externally were positive.

All strains showed cure of BV and decreased incidence of recurrence through anti-microbial action and preventing adherence of pathogen.
Femdophilus (Nature’s Way contains L reuteri+L rhamnosus) L rhamnosus: Almond Dream nondairy yogurt, Amande cultured almond milk, Trader Joe’s cultured coconut milk, Nancy’s Organic cultured soy, Nancy’s Organic cow’s milk yogurt, all kefirs, Kevita kombucha and sparkling probiotic drinks

L brevis: pickled beets, kimchi, sauerkraut, all wildbrine brand products

L plantarum: fermented vegetables, Kevita probiotic drinks, olives (green)

L acidophilus: lassi, kefir, yogurt

L reuteri, L salivarius: None
Toxic Shock
Younes21 (2012)
L reuteri RC-14 (4.0-6.4 nN) Shown to adhere to three virulent toxic shock syndrome toxin 1-producing.

S aureus strains, demonstrating the potential for rapid antipathogen effects.
None
Candida Albicans
De Seta et al32 (2014)
L plantarum vaginal Cure and decreased incidence of recurrence. Widely available L plantarum: fermented vegetables, Kevita, probiotic drinks, olives (green)
Cystitis
Stapleton et al22 (2011)

Uehara et al33 (2006)

Vicariotto21 (2014)
L crispatus

L plantarum +
S thermophilus +
L paracasei +
mannose + Tara
L crispatus resulted in significant reduction in recurrent UTIs.

L plantarum, S thermophilus, L paracasei, mannose, and Tara treatment resulted in decreased adhesion of bacteria, significantly reduced positive nitrites and leukocyte esterase and negative results after 60 d. Typical symptoms of cystitis significantly decreased.
L crispatus (not found)

Other strains ubiquitous in many multistrain probiotics
L plantarum: fermented vegetables, Kevita probiotic drinks, olives (green)

S thermophilus: All yogurts and kefirs containing “live active cultures”

L paracasei Kevita probiotic drinks, Wallaby organic cow’s milk yogurt

L crispatus: None
Prostatitis
Vicari et al23 (2014)
VS#3:
B longum,
B infantis,
B breve,
L acidophilus,
L casei,
L delbrueckii,
L bulgaricus,
L plantarum,
S salivarius subsp thermophiles) + Rifaxim (IBS + CP)
Men with chronic prostatitis and IBS were treated with VSL#3 and rifaxin with the hypothesis that gut dysbiosis may be a factor in chronic prostatitis. The treatment lowered the frequency of bacteriospermia. Ther-Biotic Factor 4 (Bifidobacterium Complex) 60c by Klaire Labs (B breve)

L plantarum: Jarrow Formulas Ideal Bowel Support, 10 Billion Organisms V-Capsules

Probiotic Supplement (GoodBelly)

Probiotic GX (Nature’s Bounty)

Probiata Digestion Support and Critical Care (Kyolic)

Probiotic Balance (Sundown Naturals)

Heart Healthy Probiotic Solutions (Dr Sinatra)

Digestive Health Probiotic (Nature Made)
Specific VSL#3 strains: None
Kidney Stones/Hyperoxaluria
Barnett et al34 (2016)
O formigenes O formigenes is commonly found in the human microbiome where it uses oxalates for energy. This Gram-negative anaerobic bacterium helps to increase intestinal absorption of oxalates and ultimately urinary oxalate excretion. This bacterial species, unfortunately, is quite susceptible to commonly prescribed antibiotics which will decrease an individual’s level of this beneficial species and increase oxalate levels which may lead to an increased risk for kidney stones. None None
Chronic Kidney Disease
Rossi et al26 (2014)

Vanholder et al24 (2015)

Pavan35 (2016)

Ranganathan et al36 (2017)

Awn et al27 (2016)
B pasteuri + L sporonges

L casei Shirota

L acidophilus +
B longum

S thermophiles, L acidophilus, B longum + F saccharides

S thermophilus (KB19),
L acidophilus (KB27) +
B longum (KB31)

S thermophilus (KB19),
L acidophilus (KB27) +
B longum (KB31)
B pasteurii + L sporogenes showed a decrease in BUN and serum creatinine in rats.

L casei Shirota in higher doses (16 billion CFU showed a small 11% decrease in BUN but not serum creatinine).

L acidophilus and B longum have shown a small, borderline significant decrease in BUN in 40% of subjects.

S thermophiles, L acidophilus, B longum (all at dosages of 15 billion CFU), plus fructooligosaccharids 100 mg given to patients with CKD stable in stages III to V. in open label RCT. Patients on low-protein diet plus pro- and prebiotics demonstrated a nonsignificant decline in GFR than in control group on low-protein diet alone over 1 y. There were no changes in blood pressure, hemoglobin, calcium, phosphorus, or albumin.

214 people with CKD responded to survey or product users and independently analyzed. Average use: 2.05 y. Longest 7 y, shortest 6 m. Reported stabilization, or decreased progression of GFR which improved with time.

25 patients with CKD, stages III to IV, treated in a cross-over study for 3 mo each of placebo or probiotic. Significant reductions in blood urea on probiotic in diabetic and nondiabetic subjects. Significant reductions in serum creatinine levels in nondiabetic subjects, but in diabetic group, changes in serum creatinine were not significant. Differences may be due to antibiotics in diabetic patients on chronic antibiotics for neurologic bladder.

In summary, only pilot studies and poor research has been conducted in this area showing conflicting outcomes. See the overview.
Thorne Bacillus Coagulans (contains L sporogenes)

Energetics Flora Chewable—L sporogenes (B coagulans)

Energetics Flora Synergy (L sporogenes)

Pure Encapsulations (L sporogenes)

Widely available

Kibow Tech: Renadyl

Kibow Tech: Renadyl
B pasteuri+L sporanges: None

L casei Shirota: Yakult

L acidophilus: Lassi, kefir, yogurt

B longum: None

S thermophilus. Yogurt; fermented milk products

Abbreviations: IBS, irritable bowel syndrome; SIBO, small intestinal bacterial overgrowth; UTI, urinary tract infection; CKD, chronic kidney disease; RCT, randomized clinical trial.

Table 3.

Supplemental Information on Gastrointestinal and Genitourinary Disorders

Disease Supplement Probiotic Strain(s)
Celiac Disease Bifibaby, Probiotical Spa B breve BR03 and B632
Celiac Disease Bifidus Balance+FOS (Jarrow Formulas) B breve BR03
Celiac Disease Natren Life Start Probiotics for Infants and Life Start Vegan (Natren) B infantis NLS
Celiac Disease Not available B longum CECT 7347
Celiac Disease Not available L paracasei CBA L74 & P31-43
Celiac Disease Renew Life Ultimate Flora Extra Care 50 Billion B breve, B longum, L rhamnosus, L paracasei
Celiac Disease Widely available L rhamnosus
H pylori Biotics Research S boulardii
H pylori Bronson Vitamins S boulardii
H pylori Jarrow Formulas S boulardii
H pylori Kirkman Labs S boulardii
H pylori Klaire Labs S boulardii
H pylori Not available L johnsonii
H pylori Nutricology S boulardii
H pylori Ortho Molecular Products S boulardii
H pylori Pure Encapsulations S boulardii
H pylori Thorne Research S boulardii
H pylori Widely available in commercial formulas L acidophilus and B lactis
Irritable Bowel Disease Digestive Health Probiotic (Nature Made) L plantarum 299v
Irritable Bowel Disease Heart Healthy Probiotic Solutions (Dr Sinatra) L plantarum 299v
Irritable Bowel Disease Ideal Bowel Support (Jarrow Formulas) L plantarum 299v
Irritable Bowel Disease Probiata Digestion Support and Critical Care (Kyolic) L plantarum 299v
Irritable Bowel Disease Probiotic Balance (Sundown Naturals) L plantarum 299v
Irritable Bowel Disease Probiotic GX (Nature’s Bounty) L plantarum 299v
Irritable Bowel Disease Probiotic Supplement (GoodBelly) L plantarum 299v
Irritable Bowel Disease Activia yogurt B animalis subsp lactis DN-173-010
Irritable Bowel Disease Align Probiotics (Proctor & Gamble) B infantis 35624
Irritable Bowel Disease Probiomics Ltd, Sydney, Australia L fermentum VRI-003
Irritable Bowel Disease VSL#3 (Sigma Tau) L acidophilus VSL
Irritable Bowel Disease VSL#3 (Sigma Tau) S thermophilus VSL
Irritable Bowel Disease VSL#3 (Sigma Tau) B infantis VSL
Irritable Bowel Disease VSL#3 (Sigma Tau) B breve VSL
Irritable Bowel Disease VSL#3 (Sigma Tau) L paracasei VSL
Irritable Bowel Disease HMF (Genestra) B bifidum CUL-20
Irritable Bowel Disease Ultra Probiotic Complex (GNC) B bifidum CUL-20
Irritable Bowel Disease HMF Fit for School B bifidum CUL-20
Irritable Bowel Disease HMF (Genestra) B lactis CUL-34
Irritable Bowel Disease Ultra Probiotic Complex (GNC) B lactis CUL-34
Irritable Bowel Disease HMF Fit for School B lactis CUL-34
Parasites HLC Maintenance (Pharmax) B animalis subp lactis
Parasites Not available L casei MTCC
Parasites Not available E faecium SF68
SIBO Iflora Multi-Probotic Formula (Sedona Labs) B bifidum, B lactis, B longum, L acidophilus, L rhamnosus, S thermophilus, and L casei
SIBO Mega Flora Plus (Mega Food) B bifidum, B lactis, B longum, L acidophilus, L rhamnosus, S thermophilus, and L casei
SIBO Mega Probiotic-ND (Food Science) B bifidum, B lactis, B longum, L acidophilus, L rhamnosus, S thermophilus, and L casei
SIBO Nexabiotic (Bioprosper Labs) B bifidum, B lactis, B longum, L acidophilus, L rhamnosus, S thermophilus, and L casei
SIBO ProBiota 12 (Seeking Health) B bifidum, B lactis, B longum, L acidophilus, L rhamnosus, S thermophilus, and L casei
SIBO Sehat Probiotic (Trivedi) B bifidum, B lactis, B longum, L acidophilus, L rhamnosus, S thermophilus, and L casei
Ulcerative Colitis Jarrow Ideal Bowel Support 299v L plantarum 299v
Ulcerative Colitis Mutaflor (Tribute Pharmaceuticals) E coli Nissle 1917
Ulcerative Colitis Ther-Biotic Factor 4 (Klaire Labs) B breve
Ulcerative Colitis VSL#3 (Sigma-tau Pharmaceuticals, Inc) VSL#3, B longum, B infantis, B breve, L acidophilus, L casei, L delbrueckii, L bulgaricus, L plantarum, S salivarius subsp hermophiles
Bacterial Vaginosis Advanced Probiotic 10 (Nature’s Bounty) L brevis+L salivarius+L plantarum
Bacterial Vaginosis Complete Probiotics (Dr Mercola) L brevis+L salivarius+L plantarum
Bacterial Vaginosis Femdophilus (Nature’s Way) L reuteri+L rhamnosus
Bacterial Vaginosis Flora 20-14 (Innate Response) L brevis+L salivarius+L plantarum
Bacterial Vaginosis Flora 50-14 (Innate Response) L brevis+L salivarius+L plantarum
Bacterial Vaginosis Lflora Multi-Probiotic Formula (Sedona Labs) L brevis+L salivarius+L plantarum
Bacterial Vaginosis Mega Flora (Mega Food) L brevis+L salivarius+L plantarum
Bacterial Vaginosis Nexabiotic (Bioprosper Labs) L brevis+L salivarius+L plantarum
Candida albicans Widely available in commercial brands L. plantarum vaginal
Cervical Isolated for research purposes only LC9018 (a biologic response modifier prepared from heat-killed L casei YIT9018)
Chronic Kidney Disease Energetics Flora Chewable L sporogenes (B coagulans)
Chronic Kidney Disease Energetics Flora Synergy L sporogenes (B coagulans)
Chronic Kidney Disease Kibow Tech Renadyl S thermophilus (KB19), L acidophilus (KB27), B longum (KB31)
Chronic Kidney Disease Not available B pasteuri
Chronic Kidney Disease Not Available L casei Shirota
Chronic Kidney Disease Pure Encapsulations L sporogenes (B coagulans)
Chronic Kidney Disease Thorne L sporogenes (B coagulans)
Chronic Kidney Disease Widely Available L acidophilus+B longum
Cystitis Not available L crispatus
Cystitis Widely available L plantarum+S thermophilus+L paracasei+mannose+Tara
Kidney Stones/Hyperoxaluria Not available O formigenes
Prostatitis VSL3 (Sigma-tau Pharmaceuticals, Inc) B longum, B infantis, B breve, L acidophilus, L casei, L delbrueckii, L bulgaricus, L plantarum, and S salivarius subsp thermophiles
Toxic Shock OptiBac Probiotics for Women (Wren Laboratories) L reuteri RC-14 (4.0-6.4 nN)

Abbreviation: SIBO, small intestinal bacterial overgrowth.

Biographies

Heather J. Finley, DCN Candidate, RD, LD, CEDRD

Margaret G. Gasta, DCN Candidate, RDN, CCN

Keren E. Dolan, DCN Candidate, CNS

Jessica M. Pizano, DCN Candidate, CNS

Crystal M. Gossard, DCN Candidate, CNS

Christy B. Williamson, DCN Candidate, CNS

Cathleen M. Burns, MDCN Candidate, RD

Emily C. Parker, MS, RD, are doctoral students in the doctor of clinical nutrition program

Elizabeth A. Lipski, PhD, CNS, BCHN, IFMCP, is a professor.

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