Table 2:
Initial assembly using PacBio reads (contigs) | |||
---|---|---|---|
Contig size | Total size (bp) | %Total assembly | Number of Contigs |
≥1 Mbp | 248,187,558 | 73.37 | 64 |
≥0.5 Mbp | 267,412,682 | 79.06 | 91 |
≥0.1 Mbp | 291,028,790 | 86.04 | 198 |
≥0.05 Mbp | 305,851,391 | 90.42 | 420 |
Assembly after Hi-C scaffolding (scaffolds) | |||
Scaffold size | Total size (bp) | %Total assembly | Number of Scaffolds |
≥1 Mbp | 304,435,280 | 89.99 | 19 |
≥0.5 Mbp | 304,435,280 | 89.99 | 19 |
≥0.1 Mbp | 308,724,809 | 91.26 | 41 |
≥0.05 Mbp | 314,467,503 | 92.96 | 134 |