Table 1. List of cases associated with the pet rat outbreak 2008 till 2011 (HA-sequence group C030; Table S1) (See last pages).
| Case | Strain designation | Host | Country | Town | Year | Reference | Accession # | Full-length genome determined |
|---|---|---|---|---|---|---|---|---|
| #1 GER 2008 | CPXV HumKre08/1 | Human | Germany | Krefeld | 2008 | Dabrowski | KC813512 | Dabrowski et al. |
| CPXV RatKre08/2 | Rat | KC813505 | ||||||
| #2 GER 2009 | CPXV Rat Koelle/Shiva | Rat | Germany | Muenchen | 2009 | Campe | FJ654467 | this study |
| CPXV Rat breeder | Rat | Hengersberg | FJ654467 | n.a. | ||||
| CPXV RatGer09/1 | Rat | Germering | Dabrowski | KC813503 | Dabrowski et al. | |||
| CPXV Rat Biederstein | Rat | Muenchen | unpublished | n.a. | this study | |||
| CPXV Boy Biederstein | Human | this study | ||||||
| #3 GER 2009 | CPXV HumAac09/1 | Human | Germany | Aachen | 2009 | Dabrowski | KC813508 | Dabrowski |
| CPXV RatAac09/1 | Rat | KC813501 | ||||||
| #4 GER 2009 | CPXV Rat Marl | Rat | Germany | Marl | 2009 | unpublished | LN864565 | Hoffmann et al. |
| CPXV Boa | Boa | n.a. | this study | |||||
| #5 FRA 2009 | CPXV Compiegne 2009 | Human | France | Compiegne | 2009 | Ninove | FJ754355 | this study |
| CPXV DG | Human | FJ754357 | n.a. | |||||
| CPXV LP | Human | FJ754356 | n.a. | |||||
| #6 FRA 2009 | CPXV R09 | Rat | France | 2009 | unpublished | FJ790310 | n.a. | |
| #7 FRA 2011 | CPXV Cepad 332 | Human | France | Epinal | 2011 | Ducournau | KC592396 | this study |
| CPXV Cepad 333 | Human | KC592397 | this study | |||||
| CPXV Cepad 336 | Human | KC592399 | n.a. |