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Carcinogenesis logoLink to Carcinogenesis
. 2018 Oct 6;40(1):164–172. doi: 10.1093/carcin/bgy131

RAD9A promotes metastatic phenotypes through transcriptional regulation of anterior gradient 2 (AGR2)

Constantinos G Broustas 1, Kevin M Hopkins 1, Sunil K Panigrahi 1, Li Wang 1, Renu K Virk 2, Howard B Lieberman 1,3,
PMCID: PMC6412126  PMID: 30295739

Abstract

RAD9A plays an important role in prostate tumorigenesis and metastasis-related phenotypes. The protein classically functions as part of the RAD9A-HUS1-RAD1 complex but can also act independently. RAD9A can selectively transactivate multiple genes, including CDKN1A and NEIL1 by binding p53-consensus sequences in or near promoters. RAD9A is overexpressed in human prostate cancer specimens and cell lines; its expression correlates with tumor progression. Silencing RAD9A in prostate cancer cells impairs their ability to form tumors in vivo and migrate as well as grow anchorage independently in vitro. We demonstrate herein that RAD9A transcriptionally controls AGR2, a gene aberrantly overexpressed in patients with metastatic prostate cancer. Transient or stable knockdown of RAD9A in PC-3 cells caused downregulation of AGR2 protein abundance. Reduced AGR2 protein levels were due to lower abundance of AGR2 mRNA. The AGR2 genomic region upstream of the coding initiation site contains several p53 consensus sequences. RAD9A bound specifically to the 5ʹ-untranslated region of AGR2 in PC-3 cells at a partial p53 consensus sequence at position +3136 downstream from the transcription start site, determined by chromatin immunoprecipitation, followed by PCR amplification. Binding of RAD9A to the p53 consensus sequence was sufficient to drive AGR2 gene transcription, shown by a luciferase reporter assay. In contrast, when the RAD9A-binding sequence on the AGR2 was mutated, no luciferase activity was detected. Knockdown of RAD9A in PC-3 cells impaired cell migration and anchorage-independent growth. However, ectopically expressed AGR2 in RAD9A-depleted PC-3 cells restored these phenotypes. Our results suggest RAD9A drives metastasis by controlling AGR2 abundance.

Introduction

Despite successes in treating localized primary prostate tumors, metastatic prostate cancer poses a real challenge. It remains essentially incurable and current therapeutic strategies extend overall patient survival by a few months (1, 2).

RAD9A is a pleiotropic protein involved in many aspects of DNA damage and repair (3). As part of the RAD9A-HUS1-RAD1 (9-1-1) complex, it acts as a sensor of DNA damage that enables ATR kinase, independently recruited to the site of damage, to phosphorylate and activate its downstream effector CHK1. Besides its role as part of the 9-1-1 complex, RAD9A can operate independently as a sequence-specific transcription factor. RAD9A is able to transactivate a select set of genes, including CDKN1A (p21waf1/cip1) (4) and NEIL1 (Nei-like DNA glycosylase 1), a DNA glycosylase involved in base excision repair (5). RAD9A regulates CDKN1A and NEIL1 gene expression by binding to DNA sequences that are p53 response elements (6).

Aberrant RAD9A expression has been associated with prostate, breast, lung, skin, thyroid and gastric cancers (7). We demonstrated that RAD9A is overexpressed in human prostate cancer specimens, as well as prostate cancer cell lines (8). Experiments designed to assess the contribution of RAD9A to prostate tumor growth revealed that downregulation of RAD9A in human prostate cancer cell line xenografts impairs growth in nude mice. Furthermore, immunohistochemical analysis of normal and tumor prostate specimens showed that RAD9A protein abundance increased along with advancement of cancer stage, suggesting a role for RAD9A in prostate malignant progression (8). In vitro evidence revealed that RAD9A downregulation impairs anchorage-independent growth, suppresses migration and invasion and sensitizes prostate cancer cell lines to anoikis, a form of apoptosis that epithelial cells activate when they lose attachment to an extracellular matrix (9). Conversely, expression of Mrad9, the mouse homolog, restores these cancer phenotypes. Although the role of RAD9A in DNA damage response and repair is well documented, it is unclear how this protein enhances prostate tumor progression and metastasis. Moreover, the nature of RAD9A effectors responsible for the tumorigenic/metastatic functions is poorly understood.

Anterior gradient protein 2 (AGR2) belongs to the protein disulfide isomerase family. Protein disulfide isomerase family members are defined by the presence of one or more thioredoxin domains containing the CXXC motif, and they catalyze formation of cysteine disulfide bonds critical for proper protein folding in the endoplasmic reticulum (ER) (10). Depending on the redox state of the protein disulfide isomerase, these CXXC motifs can mediate formation or reduction of disulfides in client proteins in the ER. AGR2 contains a thioredoxin fold structure (11). However, AGR2 contains only one active cysteine (CXXS motif), which does not allow it to transfer oxidizing equivalents to client proteins. However, this deficiency can be compensated by the ability of AGR2 to form homodimers, which can facilitate the bivalent transfer of oxidizing equivalents (11).

The AGR gene family consists of three members AGR1, AGR2 and AGR3 (10). Although AGR1 has not been associated with cancer, AGR2 and AGR3 act as pro-oncogenic agents in various cancers, including of the breast and prostate. Human AGR2 protein is found in various cellular compartments, such as the ER, the nucleus, the cell surface and the extracellular matrix. Studies using AGR2 knockout cells have demonstrated that loss of the protein results in apparent fragmentation of the ER, suggesting that AGR2 has a significant impact on cellular homeostasis (12).

Overproduction of AGR2 promotes cellular transformation, cell migration and invasion, as well as transcriptional silencing of p53 in response to DNA damage (10). Mechanistically, AGR2 suppresses p53 activation through inhibition of p38 mitogen-activated protein kinase (13). AGR2 is markedly elevated in a majority of tumors, including prostate carcinoma. High expression of AGR2 has been associated with poor survival in lung adenocarcinoma patients (14). In regards to prostate cancer, aberrant AGR2 mRNA and protein levels are detected in patients with metastatic disease (15). Furthermore, AGR2 mRNA was initially discovered to be androgen inducible (16). However, AGR2 is also expressed at high levels in castration-resistant prostate cancer cell lines, suggesting that AGR2 can be induced by both androgen/androgen-receptor-dependent and independent pathways.

Besides the intracellular localization of AGR2, cancer cells secrete the protein to the extracellular matrix. Secretion of AGR2 confers tumorigenic properties (17) and increased tumor cell survival (18). It is also associated with tumor progression (10). In addition, cancer-secreted AGR2 induces programmed cell death in normal cells (19). Finally, it has been proposed that serum AGR2 could be a useful cancer biomarker, such as for pituitary adenocarcinomas (20).

In this study, we show that RAD9A controls AGR2 mRNA and protein levels. RAD9A binds at a partial p53-consensus sequence at the 5ʹ-untranslated region of AGR2 and regulates its expression. Silencing of RAD9A impairs cell migration and anchorage-independent cell growth, which is reversed by concomitantly expressing AGR2. These results further establish RAD9A as a pleiotropic transcription factor that has a significant role in tumor metastasis.

Materials and methods

Cell culture

Prostate cancer cells PC-3 and DU145 were purchased from ATCC (Manassas, VA) and no further authentication was performed. Cells for experiments were obtained from the original stock preserved in liquid nitrogen and they were passaged for <6 months. Both cell lines were grown at 37°C, 5% CO2 in RPMI 1640 (Thermo Fisher), supplemented with 10% fetal bovine serum (Atlanta Biologicals or Thermo Fisher), 100U/ml penicillin, 100µg/ml streptomycin and 2.5µg/ml Fungizone (Thermo Fisher).

RNA interference and plasmid construction

The pSUPER.retro.puro RAD9A shRNA expression vector (Oligoengine) and viral production have been described (9). We isolated two clones of PC-3 cells that stably downregulate RAD9A. Downregulation of RAD9A protein was assessed by western blotting with RAD9A antibody (BD Biosciences).

RNA interference experiments were carried out with siRNA against RAD9A (two non-overlapping siRNAs denoted 1 and 2), whereas Luciferase (siLuc) served as control. The sequences and concentrations of these siRNA have been reported (9). For transient transfection, cells at approximately 30% confluency were transfected with the indicated siRNA using Lipofectamine 3000 (Invitrogen), and protein abundance was examined 48–72h later by western blot analysis.

MYC-DDK-tagged AGR2 cDNA cloned into pCMV6 expression vector was purchased from OriGene. To isolate stable clones of PC-3/crRAD9A cells with AGR2, cells were transfected with AGR2-MYC-DDK plasmid, and colonies (#2, #6) were picked after 2–3 weeks of selection in 1 mg/ml G418.

The FLAG-tagged RAD9A cDNA was generated from mRNA extracted from PC-3 cells and reverse transcribed using a SuperScript III kit (Invitrogen). cDNA was amplified using PCR human RAD9A gene primers: forward, 5ʹ-GGTACTGGATCCATGGAT TACAAGGATGACGACGATAAGATGA AGTGCCTGGTCACGGGCGGCA-3ʹ (BamHI underlined; FLAG-tag in italics) and reverse, 5ʹ-GGTAGACTC GAGTCAGCCTTCACCC TCACTGTCTTCCGC CAGCACAGGGCT-3ʹ (XhoI underlined). PCR conditions were 94°C for 2 min, 30 cycles of denaturation at 94°C for 30 s, annealing and extension at 68°C for 4 min and a final extension at 72°C for 7 min. The PCR-amplified product was ligated into the pcDNA3 expression vector (Invitrogen).

Generation of RAD9A knockout human prostate cancer cell lines with clustered regularly interspaced short palindromic repeats (crRAD9A)

Three RAD9A guide RNAs (gRNA) were designed using the software from Zhang Feng’s lab at Massachusetts Institute of Technology (MIT) (http://crispr.mit.edu). The sequence of RAD9A gRNAs was 5ʹ- GGTCACGGGCGGCAACGTGA-3ʹ. The gRNA was used to target exon 1 of RAD9A at the fifth amino acid from the start codon. This gRNA was ligated to its complementary strand and cloned into lentiCRISPR v2 (Addgene # 52961) vector at BsmbI restriction site and confirmed by sequencing. Lentiviral particles with gRNA were produced in HEK293 cells as described (4). After drug selection and isolation of single colonies, ~48 colonies for each cell line were tested for RAD9A protein levels by western blotting with anti-RAD9A antibodies. Two clones (#32, #41) showing minimum expression of RAD9A protein were chosen. RAD9A exon 1 covering the targeted gRNA region was amplified in both clones, inserted into PCR 2.1-TOPO-TA vector, and the sequences were determined.

Real-time quantitative PCR

TRIzol reagent (Invitrogen) was used to isolate RNA. One microgram of RNA was reverse transcribed to cDNA using the Superscript III transcriptase First Strand Synthesis System (Invitrogen). Real-time PCR was carried out in triplicate using SYBR-Green PCR Master Mix on the Vii7 Real-Time PCR instrument. Expression levels were normalized to GAPDH abundance. Analysis of relative gene expression was performed, using the 2−ΔΔCT method (21). The following sense and antisense primers were synthesized by Thermo Fisher: AGR2, 5ʹ-GTCAGCATTCTTGCTCCTTGT-3ʹ (forward); 5ʹ-GGGTCGAGAGTCCTTTGTGTC-3ʹ (reverse), GAPDH, 5′-CATCTCTG CCCCCTCTGCTG-3′ (forward) and 5′-CCCTCCGACGCCTGCTTCAC-3′ (reverse). Primers were designed using the PrimerBank resource (http://pga.mgh.harvard.edu/primerbank) (22).

Western blot analysis

Cells were lysed in radioimmune precipitation assay buffer, as described earlier (9). Protein was subjected to 4–12% Bis/Tris (Invitrogen) gel electrophoresis. Quantitation of band intensity was performed with ImageJ software v1.47f (http://rsb.info.nih.gov/ij/). The following antibodies were used in this study: RAD9A monoclonal antibodies (BD Biosciences #611324), AGR2 polyclonal antibodies (Abcam # ab76473), β-actin (#A1978) and α-tubulin (#T9026) monoclonal antibodies (Sigma).

Chromatin immunoprecipitation

Chromatin immunoprecipitation (ChIP) was performed as described by Panigrahi et al. (23), except with minor modifications. Chromatin from approximately 107 PC-3 cells was cross-linked by adding 1% formaldehyde for 10 min at room temperature; then the reaction was stopped by addition of 125 mM of glycine. The chromatin template was subsequently fragmented to a size of 150–200 bp by sonication. Debris was removed by centrifugation at 16 000× g for 10 min at 4°C. Aliquots of the chromatin samples were subjected to ChIP using an anti-RAD9A (Abcam #ab70810) antibody or rabbit IgG (Vector Laboratories # I-1000) as a control. Samples were then washed extensively and bound nucleoprotein complexes were eluted in 200µl of elution buffer [50 mM Tris–HCl (pH 8.0), 10mM ethylenediaminetetraacetic acid, 1% sodium dodecyl sulfate] at 65°C for 20min. After elution, samples were incubated at 65°C for 12h to reverse cross-links. The DNA was purified using the Qiagen PCR purification kit and served as template for PCR employing SYBR-Green PCR master mix (Applied Biosystems) in an ABI 7300 real-time PCR system, as per the manufacturer’s instructions. Five primer pairs spanning the genomic region upstream of the AGR2 initiation site were used. Primer sequences are listed in Supplementary Table 1, available at Carcinogenesis Online. The TRANSFAC database on transcription factors was used to predict p53-consensus binding sites (24).

Luciferase assay

PC-3/crRAD9A cells, lacking endogenous RAD9A, were transfected with 0.5 µg of Renilla luciferase reporter plasmid (pGL3; Promega), along with 2 µg of firefly luciferase reporter under the control of a wild-type sequence that conforms to a partial p53-consensus site or three different mutated genomic sequences upstream of the AGR2 initiation site sequences (Supplementary Table 2, available at Carcinogenesis Online), and 2 µg of FLAG-RAD9A-pcDNA3 or empty expression vector using Lipofectamine 3000. Cell lysates were prepared 24 h later using the Dual Luciferase Assay System (Promega), according to the manufacturer’s instructions. Firefly luciferase activity was determined by a Synergy 2 luminometer (BioTek) and normalized to Renilla luciferase activity.

Wound-healing assay

For the wound-healing migration assay, cell populations grown to confluency in 6-well plates were scratched with a sterile P200 pipette tip. Detached cells were removed with Dulbecco’s phosphate-buffered saline. Attached cells were allowed to migrate in serum-free medium (RPMI/0.1% bovine serum albumin). Photographs of the wounds were taken at 0, 24, and 48 h after medium was added. The wound gap was quantified by National Institutes of Health ImageJ software (http://rsbweb.nih.gov/ij/).

Anchorage-independent growth assay

Cells were suspended in 500 μl of RPMI/10% fetal bovine serum medium containing 0.33% agarose and plated in duplicate on top of 1 ml of solidified 0.67% agarose/RPMI/10% fetal bovine serum in 12-well plates (1000 cells/well). Cells were placed in a 37°C and 5% CO2 incubator, and colonies were allowed to form for 2 weeks. Colonies were stained with 0.005% crystal violet for 2 h, and photographs of five fields/well were taken under the microscope. Colonies with a diameter >20 μm were scored.

Statistical Analysis

Data were represented as mean ± standard deviation (S.D.). P values were calculated by a paired two-sided Student’s t-test, and values < 0.05 were considered statistically significant.

Results

RAD9A controls AGR2 protein and mRNA levels

RAD9A promotes cell migration and invasion of DU145 and PC-3 human prostate cancer cells (9). Likewise, AGR2 has been identified recently as a pro-metastatic protein in a number of human malignancies, including prostate cancer (10). Preliminary results showed that AGR2 is abundantly expressed in PC-3 cells, but barely in DU145 cells (Supplementary Figure 1, available at Carcinogenesis Online). Therefore, to test whether RAD9A and AGR2 are functionally related, we focused our studies on PC-3 cells. Initially, we transiently silenced RAD9A in PC-3 and examined AGR2 protein levels. Immunoblot analysis revealed that AGR2 abundance was significantly diminished in PC-3 treated with two different RAD9A siRNAs (Figure 1A and B). The average percent downregulation of AGR2 in response to transient RAD9A knockdown was approximately 60% for both RAD9A-1 (P < 0.008; n = 3) and RAD9A-2 (P < 0.004; n = 3). In contrast, AGR2 silencing did not affect RAD9A protein levels (see Figure 5A). Furthermore, stable RAD9A knockdown by short hairpin (sh)RNA in two clones of PC-3 cells achieved a complete reduction of AGR2 protein (Figure 1C). Likewise, two independent PC-3 clones (#32, #41) with RAD9A knockout using clustered regularly interspaced short palindromic repeats (CRISPR)/Cas9 editing led to complete AGR2 downregulation (Figure 1D).

Figure 1.

Figure 1.

RAD9A knockdown reduces AGR2 protein levels. (A) PC-3 cells were transiently transfected with control (luciferase; Luc) or two non-overlapping RAD9A siRNAs (1, 2). Three days post-transfection, cell lysates were analyzed for AGR2, RAD9A and β-actin (loading control) protein levels by immunoblotting. (B) Cumulative data from three independent transfection experiments, as per part A. Data shown as mean ± SEM (n = 3). (C) PC-3 cells were stably transfected with either control (insertless pSUPER-retro vector) or RAD9A shRNA (two clones 1 and 2) and cell lysates were analyzed for AGR2, RAD9A and β-actin (loading control) protein levels by immunoblotting. * P < 0.008 (n =3); ** P < 0.004 (n = 3). EV, empty vector. (D) Western blot analysis of AGR2 and RAD9A abundance in RAD9A-CRISPR (crRAD9A) PC-3 cells (clones 32 and 41). β-actin is the loading control.

Figure 5.

Figure 5.

Wound-healing assay. AGR2 knockdown impairs cell migration. (A) PC-3 cells were transiently transfected by siRNA targeting RAD9A, AGR2, or the Luciferase gene (control), and protein levels were assessed by immunoblotting. (B) Wound gap was quantitated at 0, 24 and 48 h after wound placement and removal of dislodged cells from the dish. At time 0 h, values were set at 100%, and wound closure was expressed as a percentage relative to 0 h. Data are mean ± SD (n = 2). Reexpression of AGR2 partially restores migration capability of PC-3 cells with reduced endogenous levels of RAD9A. (C) Western blot analysis showing ectopic expression of FLAG-MYC-tagged AGR2 in PC-3 cells containing low levels of endogenous RAD9A (PG13). (D) Wound gap of PC-3 parental cells, PG13 (RAD9A targeted using the CRISPR/Cas technology), and two clones of PG13 cells stably expressing ectopic AGR2-MYC-DDK (PG13.2, PG13.6) was quantitated after 0, 24 and 48 h. At time 0 h, values were set at 100%, and wound closure was expressed as a percentage relative to the 0 h. Data are mean ± SD (n = 3). *P < 0.03; **P = 0.002.

Next, we sought to determine whether AGR2 mRNA expression is under the control of RAD9A, as it has been documented that RAD9A functions as a transcription factor. Quantitative real-time PCR showed that transient RAD9A knockdown using two independent siRNAs led to a 64% (RAD9A-1; P < 0.002; n = 5) and 53% (RAD9A-2; P = 6.58E-05; n = 5) downregulation of AGR2 mRNA compared with cells expressing control luciferase siRNA (Figure 2A). Stable RAD9A downregulation in two clones of PC-3 cells resulted in complete reduction of AGR2 mRNA compared with control insertless shRNA vector (Figure 2B). Finally, we demonstrate that RAD9A knockout (crRAD9A) reduces AGR2 mRNA expression by more than 90% when compared with parental PC-3 cells (Figure 2C).

Figure 2.

Figure 2.

RAD9A silencing impairs AGR2 expression. (A) PC-3 cells were transiently transfected with control (luciferase; Luc) or two non-overlapping RAD9A siRNAs. Two days post-transfection, total RNA was isolated and AGR2 mRNA abundance was quantitated by real-time quantitative PCR (RT-qPCR). GAPDH transcript abundance served as a control. Data shown as mean ± SD * P < 0.002, ** P = 6.58E-05 (n = 5) (B) PC-3 cells stably transfected with either control (insertless pSUPER-retro vector) or RAD9A shRNA (two clones) were examined for AGR2 mRNA levels by RT-qPCR. Data shown as mean ± SD (n = 3). (C) Parental PC-3 cells or RAD9A knockout PC-3 cells (crRAD9A) were examined for AGR2 mRNA expression by RT-qPCR. Data shown as mean ± SD (n = 3). EV, empty vector.

RAD9A binds directly to a sequence at the 5ʹ-untranslated region of AGR2 and drives its transcription

Previously, we showed that RAD9A functions as a transcription factor and binds to p53-consensus sequences at the promoter of genes, such as p21waf1/cip1 and NEIL1 (4,5). Because RAD9A silencing reduced AGR2 mRNA abundance, we reasoned that RAD9A may bind at or near the AGR2 promoter and control gene transcription. Furthermore, we searched for p53-consensus sequences on the AGR2 that could serve as candidates for RAD9A binding. We found that the AGR2 contains several putative p53-consensus sequences within the −2000/+4000 bp region (Figure 3A and Supplementary Table 2, available at Carcinogenesis Online). To determine whether RAD9A bound any of these sequences, we performed ChIP-qPCR analysis. Our results showed that RAD9A selectively bound to an AGR2 region at position +3136 (designated E-region), relative to the transcriptional start site, and it contained an imperfect p53-consensus sequence (Figure 3B).

Figure 3.

Figure 3.

RAD9A protein binds to a p53 consensus sequence at the 5ʹ-untranslated region of AGR2. Binding of RAD9A to the putative p53 binding sequences of AGR2 was tested by ChIP-qPCR using PC-3 cells. (A) Schematic representation of P53 binding site positions on the genomic region upstream of human AGR2. Each letter represents the primer pair used for ChIP-qPCR. (B) Fold enrichment of RAD9A relative to IgG in ChIP-qPCR experiments. Data shown as mean ± SD (n = 3). ** = two P53 binding sites.

Next, to assess the functionality of the binding, we cloned a ~4 kb fragment (−630 to +3212) of the human AGR2 gene that contained the p53 consensus sequence at position +3136, into a luciferase (LUC) expression vector and co-transfected the 4 kb AGR2-LUC plasmid with the CMV-RAD9A expression vector into PC-3 cells knocked out for the inherent RAD9A gene (PC-3 crRAD9 #41 cells). Ectopically expressed RAD9A increased the transcriptional activity of the AGR2, as indicated by the high levels of luciferase activity detected (compare Figure 4A, columns 1 and 5). Site-directed mutagenesis of RAD9A binding sequences using two constructs with two different point mutations and a deletion construct (Supplementary Table 3, available at Carcinogenesis Online) blocked the ability of RAD9A to activate AGR2 (Figure 4A, columns 2, 3 and 4), indicating that the F-region on the AGR2 region upstream of the initiation site, where RAD9A binds, is required for RAD9A-directed activation of AGR2 gene. Figure 4B shows that approximately equal amounts of FLAG-tagged RAD9A protein are present in the PC-3 crRAD9 #41 cells also containing wild-type or mutated versions of the AGR2 putative p53 binding sites. The empty vector (pcDNA3 devoid of an insert) was transfected into the same cells as a control.

Figure 4.

Figure 4.

RAD9A functionally controls AGR2 gene expression. (A) Luciferase reporter assay. pcDNA3-RAD9A or pcDNA3 (EV; control) was co-transfected with firefly pGL3-luciferase vector under the control of the wild-type (WT) or three mutated (M1, M2, M3) AGR2 genomic sequences, together with Renilla pRL-TK, into PC-3 crRAD9 #41 cells. Luciferase activity was normalized by the internal control pRL-TK. Error bars represent the standard deviation of triplicate transfections. (B) Western blot analysis of RAD9A protein levels.

Ectopic expression of AGR2 in PC-3/crRAD9A cells partially restores cell migration

We showed previously that knockdown of RAD9A in DU145 and PC-3 cells impairs cell migration and invasion (9). Moreover, AGR2 depletion compromises migration of numerous tumor cell lines (25). To examine the effect on migration when AGR2 is ectopically expressed in PC-3 cells knocked down for RAD9A by shRNA, we carried out a wound-healing assay. For the first set of these experiments, PC-3 cells transiently transfected with luciferase (Luc) control siRNA, or siRNA corresponding to RAD9A (Rad9A-2) or AGR2 were used. Figure 5A shows that, relative to the luciferase siRNA control, RAD9A siRNA reduced levels of RAD9A and AGR2 proteins, whereas the AGR2 siRNA only reduced levels of the corresponding protein, as predicted. Furthermore, in agreement with our previous results, knockdown of RAD9A impaired cell wound closure. Although in control cells the remaining wound gap was 20% by day 2, in the shRAD9A cell population the wound gap was 75% (Figure 5B). Similarly, AGR2 knockdown resulted in impaired wound closure with an approximately 65% gap remaining at day 2 (Figure 5B). For the second set of related studies, we used parental PC-3 cells, a derivative knocked out for RAD9A (PG13), and two independent clones of the latter ectopically expressing AGR2 (PG13_AGR2.2, PG13_AGR2.6). The anticipated levels of AGR2, RAD9A and β-actin control proteins in those cells were confirmed by western blotting (Figure 5C). The wound closure assay results for these cells are consistent with the previous study findings (Figure 5B and D). Knockout of RAD9A (in PG13 cells) impaired the ability of PC-3 cells to close the wound gap. However, stable ectopic expression of AGR2 in the cells knocked out for RAD9A (PG13_AGR2.2, PG13_AGR2.6) accelerated wound closure. Thus, although the remaining wound gap after 2 days was 77% in RAD9A knocked out cells, wound closure accelerated in PG13_AGR2.2 cells with the gap at 58% (P < 0.03) and for PG13_AGR2.6 at 46% (P = 0.002) (Figure 5D). However, the closure was partial and did not reach the rate of PC-3 or PC-3/shControl cells. We conclude that AGR2 only partially rescues the migration defect of PC-3/shRAD9A cells and RAD9A affects cell migration by AGR2-dependent and independent pathways.

Ectopic expression of AGR2 in PC-3/crRAD9A cells restores anchorage-independent growth

Anchorage-independent growth of cancer cells in vitro correlates with their ability to produce experimental metastasis in vivo (26). We have shown previously that RAD9A depletion in DU145 cells impairs anchorage-independent growth, whereas ectopic expression of mouse Rad9a in those cells with depleted endogenous RAD9A is able to restore growth in soft-agarose (9). AGR2 is considered a metastatic gene, and like RAD9A, downregulation of AGR2 using siRNA impairs anchorage-independent growth in various cancer cell lines (25, 27). In agreement with these results, when RAD9A was knocked out in PC-3 cells, they demonstrated reduced ability for anchorage-independent growth, as assessed by colony formation in soft agarose. The cells displayed a 75% reduction in survival compared with parental PC-3 cells (Figure 6A). In contrast, ectopic expression of AGR2 in PC-3/crRAD9A (clones 2 and 6) cells enhanced their ability to grow in soft-agarose (Figure 6A). Clone 6, expressing elevated AGR2 protein levels compared with clone 2 (Figure 5C), was able to fully reverse the PC-3/crRAD9A cells anchorage-independent growth defect, whereas clone 2 was less effective in doing so. These results support the idea that AGR2 is a downstream effector of RAD9A in the metastatic process.

Figure 6.

Figure 6.

Anchorage-independent growth. (A) An equal number of PC-3 cells from different groups was assayed for colony formation in soft agarose. Numbers of colonies with a diameter >20 μm were quantified 3 weeks plating. Shown is one representative experiment of three independent experiments, each performed in triplicate. (B) Representative images of colonies in soft agarose.

Discussion

We and others have shown previously that RAD9A protein levels are significantly elevated in a number of human malignancies, including prostate cancer (7). In vivo data using xenograft models have demonstrated that RAD9A knockdown in prostate cancer cells impairs their ability to form tumors. Furthermore, immunohistochemical analyses of human prostate cancer specimens revealed that RAD9A is predominantly expressed in more advanced and metastatic stages of prostate cancer (8). However, until recently, mechanistic details of how RAD9A impacts tumor metastasis had been largely unexplored. RAD9A silencing in prostate cancer cell lines leads to increased anoikis, impaired cell motility and suppressed anchorage-independent growth, all in vitro traits associated with the metastatic process (9). Furthermore, RAD9A silencing results in reduced ITGB1 (integrin β1) levels, whereas other integrins are not affected (9, 28). Interestingly, RAD9A silencing reduced AKT activation (judged by the reduced phosphorylation levels at Ser473, which is considered a marker for AKT activation) in prostate cancer cells maintained in suspension, but not in cells attached to plastic (9).

RAD9A can act as a sequence-specific transcription factor, a function that is independent of its more established roles in the 9-1-1 complex (4, 5) and in physically interacting with other proteins to repair damaged DNA (3). Interestingly, a number of DNA damage and repair pathway proteins, including BRCA1, PARP1 and TIP60, also function as transcriptional (co)regulators (29). However, whether the DNA damage repair function of these genes is required to promote metastasis or another activity is responsible (e.g., transcription control) has not been determined.

In the current study, we present the novel finding that RAD9A transcriptionally controls the abundance of AGR2. RAD9A binds specifically at a p53-recognition sequence located downstream of the AGR2 transcriptional start site and induces gene transcription. Other well-characterized p53-responsive genes, such as PUMA and DDB2, have been shown to contain p53 binding sites downstream of their transcriptional start site (30, 31). Although several p53 consensus-like sequences were detected upstream of the AGR2 protein initiation codon region, RAD9A was able to bind only one of those (at position +3136). The particular nucleotides flanking the p53 consensus sequences, as well as competition with other transcription factors binding at or near the same region could explain this specificity (6). It is known that binding of a transcription factor to a consensus sequence is affected by nucleotide composition flanking the consensus sequence. We found that deleting or mutating the putative binding site abrogates RAD9A binding and transcription. Importantly, RAD9A and AGR2 functionally interact to control migration and anchorage-independent growth. Ectopic expression of AGR2 in RAD9A-depleted PC-3 cells partially reverses cell migration defects. These results suggest RAD9A regulates cell migration by AGR2-dependent and AGR2-independent mechanisms. A likely AGR2-independent route may be through the activity of ITGB1. We have shown previously that RAD9A is able to modulate levels of ITGB1, an integrin that plays important roles in tumor cell migration (9). Although AGR2 is a regulator of cellular adhesion in prostate cancer and AGR2 knockdown reduces abundance of a number of integrins in PC-3 cells, it does not appear to regulate ITGB1 levels (32). On the other hand, reexpression of AGR2 in PC-3/shRAD9 cells completely rescues the ability of those cells to survive and proliferate under anchorage-independent conditions. These results strongly support a model indicating that RAD9A drives tumor invasion and metastasis by modulating AGR2 abundance.

AGR2 overexpression upregulates numerous genes involved in cell proliferation, migration/invasion and angiogenesis (33), which favor metastasis, and it has been proposed to be a marker that determines negative prognosis in prostate, breast and ovarian cancers. Global gene expression analysis of circulating tumor cells from metastatic carcinomas, including one metastatic prostate cancer revealed that AGR2 was one of the transcripts consistently detected in CTCs in peripheral blood of advanced cancer patients (34). Furthermore, immunohistochemical staining of AGR2 showed markedly increased expression in high-grade prostatic intraepithelial neoplasia and Gleason stage 3–4 prostatic adenocarcinoma, relative to adjacent benign tissue (16). Overexpression of AGR2 promotes the migration and invasiveness of non-metastatic LNCaP human prostate cancer cells, whereas silencing of AGR2 in metastatic C4-2B cells blocks cell invasion (15). ErbB3 binding protein 1 suppresses AGR2 and impairs metastatic potential in the C4-2B prostate cancer cell line (15). AGR2 promotes migration and invasion of prostate cancer cells (15), but it attenuates cell growth (35).

A number of transcription factors, such as FOXA1/2 (15, 36), FOXM1 (37) and hypoxia-inducing factor 1 (38), function as transcription factors of AGR2 in various human malignancies. These transcription factors play crucial roles in the advancement of human prostate cancer to castration-resistance and metastasis. FOXA1 pioneer transcription factor is one of the driver oncogenes that lead to castration-resistant prostate cancer (39). Likewise, FOXA2 is involved in progression of prostate cancer to castration resistance (37). Targeting FOXM1 reduces cell growth and stemness in castration-resistant prostate cancer in vitro and in vivo (40). Finally, HIF1α in cooperation with FOXA2 promotes androgen-independent transition to neuroendocrine prostate tumors (41). However, the particular conditions under which each transcription factor functions, their relative contributions to cancer and the physiological outcome of their activities remain not fully defined.

Future studies in animals will focus on the role of AGR2 in RAD9A-dependent tumor initiation and progression. In this regard, it will be important to evaluate the translational potential of RAD9A and AGR2 as novel diagnostics and therapeutic targets for prostate cancer.

Funding

This work was supported by National Institutes of Health grant (CA130536).

Conflict of Interest Statement: None declared.

Supplementary Material

Supplementary Material

Abbreviations

ChIP

chromatin immunoprecipitation

CRISPR

clustered regularly interspaced short palindromic repeats

ER

endoplasmic reticulum

gRNA

guide RNAs

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Supplementary Material

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