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. 2019 Mar 6;101(5):905–919.e8. doi: 10.1016/j.neuron.2019.01.047
REAGENT or RESOURCE SOURCE IDENTIFIER
Antibodies

Rabbit anti-Brn3a Millipore Cat# AB5945; RRID: AB_92154
Chicken anti-NF200 Abcam Cat# ab4680; RRID: AB_304560
Rabbit anti-HA Cell Signaling Technology Cat# 3724; RRID: AB_1549585
Mouse anti-HA Sigma-Aldrich Cat# A2095; RRID: AB_257974
Mouse anti-Beta-Actin Sigma-Aldrich Cat# A5316; RRID: AB_476743
Rat anti-MBP Abcam Cat# ab7349; RRID: AB_305869
Phalloidin-Tetramethylrhodamine B isothiocyanate (TRITC) Sigma-Aldrich Cat: P1951; RRID: AB_231514
Rabbit anti-Protein Gene Protein 9.5 (PGP 9.5) Zytomed Cat# 516-3340
Amersham ECL Mouse IgG, HRP-linked whole antibody (from sheep) GE Healthcare Life Sciences Cat# NA931V; RRID: AB_772210
Amersham ECL Rabbit IgG, HRP-linked whole antibody (from donkey) GE Healthcare Life Sciences Cat# NA934V; RRID: AB_772206
Donkey anti-rabbit IgG Alexa 488 Thermo Fisher Scientific Cat# A-21206; RRID: AB_2535792
Donkey anti-rabbit IgG Cy3 Jackson ImmunoResearch Labs Cat# 711-166-152; RRID: AB_2313568
Donkey anti-mouse IgG Alexa 488 Thermo Fisher Scientific Cat# A-21202; RRID: AB_141607
Goat anti-chicken Alexa 488 Thermo Fisher Scientific Cat# A-11039; RRID: AB_2534096
Donkey anti-rabbit IgG Alexa 546 Thermo Fisher Scientific Cat# A10040; RRID: AB_2534016
Goat anti-rabbit IgG Alexa 488 Thermo Fisher Scientific Cat# A-11008; RRID: AB_143165
Guinea pig anti-CASPR Gift from Bhat MA N/A
Mouse anti-S100 Sigma-Aldrich Cat#S2532; RRID: AB_477499
Goat anti-Rat CF405M Sigma-Aldrich Cat#SAB4600463
Biotinylated Goat anti-rabbit Vector Biolabs Cat# BA-1000; RRID: AB_2313606
Alexa Fluor 488 streptavidin Thermo Fisher Scientific Cat#S11223; RRID: AB_2336881

Bacterial and Virus Strains

Lentivirus CAMKII-EGFP Signagen Cat#: SL100304

Chemicals, Peptides, and Recombinant Proteins

BDNF recombinant human Thermo Fisher Scientific Cat#10908010
NT3 recombinant human Peprotech Cat#450-03
β-NGF recombinant human Peprotech Cat#450-01
GDNF recombinant human Peprotech Cat#450-10
Cultrex Mouse Laminin I, Pathclear R&D Systems Cat#3401-010-02
CHIR99021 Sigma-Aldrich Cat#SML1046
SU-5402 Sigma-Aldrich Cat#SML044
DAPT Sigma-Aldrich Cat#D5942
LDN-193189 Sigma-Aldrich Cat#SML0559
SB431542 Sigma-Aldrich Cat#616461
PF-05089771 Sigma-Aldrich Cat#PZ0311
BIIB074 Axon Medchem Cat#2548
Naloxone Sigma-Aldrich Cat#N7758

Critical Commercial Assays

Pierce BCA Protein Assay Kit Thermo Fisher Scientific Cat#: 23227

Deposited Data

Human iPSC (AD2, AD3, NHDF, AH017) and iPSC-nociceptor RNA-seq data Baskozos et al., 2019 GEO: GSE107181
Human DRG L2 RNA-seq data Ray et al., 2018 dbGAP: phs001158.v1.p1
Single cell RNA-seq human iPSC and iPSC-nociceptor data Schwartzentruber et al., 2018 ENA: ERP020576
Human whole blood, skin, skeletal muscle, fibroblasts, and tibial nerve raw counts GTEx V7 N/A

Experimental Models: Cell Lines

Human iPSC line_ HC1 StemBANCC Consortium AD2-1
Human iPSC line_ HC2 StemBANCC Consortium NHDF-1
Human iPSC line_HC3 StemBANCC Consortium AH017-7
Human iPSC line_CIP1.1 StemBANCC Consortium 811-05-01
Human iPSC line_CIP1.2 StemBANCC Consortium 811-05-03
Human iPSC line_CIP2 StemBANCC Consortium 246-03-01

Oligonucleotides

YWHAZ F 5′-CCTGCATGAAGTCTGTAACTGAG-3′ IDT N/A
YWHAZ R 5′-GACCTACGGGCTCCTACAACA-3′ IDT N/A
SCN9A F 5′-GGCATAGGCGAGCACATGAA-3′ IDT N/A
SCN9A R 5′-AACAAGGAGCCACGAATGCT-3′ IDT N/A

Recombinant DNA

pSpCas9(BB)-2A-Puro (PX459) V2.0 Addgene (Depositor:Feng Zhang) #62988

Software and Algorithms

ImageJ/Fiji NIH https://imagej.nih.gov/ij/index.html, https://fiji.sc/
Clampfit 10 Molecular Devices http://mdc.custhelp.com/app/answers/detail/a_id/18779/?/axon%E2%84%A2-pclamp%E2%84%A2-10-electrophysiology-data-acquisition-%26-analysis-software
Prism 7.0 GraphPad software https://www.graphpad.com/
FMRIB’s Software Library Smith et al., 2004 https://fsl.fmrib.ox.ac.uk/fsl/fslwiki
QTRAC software Institute of Neurology, London, UK N/A
STAR version 2.5.2b Dobin et al., 2013 https://github.com/alexdobin/STAR
HTSeq version 0.11.0 Anders et al., 2015 https://github.com/simon-anders/htseq
DESeq2 version 1.18.1 Love et al., 2014 https://www.bioconductor.org/packages/release/bioc/html/DESeq2.html
GTEx portal version 7 Carithers and Moore, 2015 https://gtexportal.org/home/
R version 3.4.4 R Development Core Team, 2018 https://cran.r-project.org/
Ggplot2 version 2.2.1 Wickham, 2009 https://cran.r-project.org/web/packages/ggplot2/index.html
IN Cell Developer Toolbox analysis software build 1.9.2 GE IN Cell Developer Toolbox analysis software build 1.9.2