Table 3. Metabolic pathways information.
KEGG | Total | Expected | Hits | Raw p | −log(p) | FDR | Impact |
---|---|---|---|---|---|---|---|
Pentose phosphate pathway | 18 | 0.27 | 1 | 0.24 | 1.42 | 1 | 0 |
Glycerophospholipid metabolism | 26 | 0.39 | 1 | 0.33 | 1.10 | 1 | 0.0112 |
Cysteine and methionine metabolism | 33 | 0.50 | 1 | 0.40 | 0.91 | 1 | 0.0108 |
Purine metabolism | 60 | 0.91 | 1 | 0.61 | 0.49 | 1 | 0.0059 |
Note:
Total, the total number of metabolites in targeted metabolic pathway; Expected, one parameter; Hits, the actually matched number from the user uploaded data; Raw p, the original p-value calculated from the enrichment analysis; FDR, the p-value adjusted using False Discovery Rate; Impact, the pathway impact value calculated from pathway topology analysis.